Basic Information

Insect: Prosopocoilus inquinatus
Gene Symbol: -
Assembly: GCA_036172665.1
Location: CM069874.1:53048405-53049898[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.015 0.91 11.1 0.4 2 23 132 153 131 153 0.96

2 11 3.5e-05 0.0022 19.3 0.0 1 23 159 181 159 181 0.99

3 11 0.0088 0.55 11.7 3.6 1 23 184 206 184 206 0.98

4 11 7.2e-06 0.00045 21.4 0.6 2 23 232 254 231 254 0.96

5 11 5.3e-06 0.00033 21.9 0.5 1 23 260 282 260 282 0.99

6 11 0.00024 0.015 16.7 1.0 1 23 311 333 311 333 0.98

7 11 0.00034 0.021 16.2 1.7 1 23 356 379 356 379 0.97

8 11 0.0043 0.27 12.7 0.9 2 23 386 408 386 408 0.90

9 11 1.2e-05 0.00072 20.8 0.9 1 23 414 436 414 436 0.99

10 11 1.5e-05 0.00093 20.5 1.9 1 23 442 464 442 464 0.99

11 11 3.6e-08 2.2e-06 28.7 2.3 1 23 470 492 470 492 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.015	0.91	11.1	0.4	2	23	132	153	131	153	0.96
2	11	3.5e-05	0.0022	19.3	0.0	1	23	159	181	159	181	0.99
3	11	0.0088	0.55	11.7	3.6	1	23	184	206	184	206	0.98
4	11	7.2e-06	0.00045	21.4	0.6	2	23	232	254	231	254	0.96
5	11	5.3e-06	0.00033	21.9	0.5	1	23	260	282	260	282	0.99
6	11	0.00024	0.015	16.7	1.0	1	23	311	333	311	333	0.98
7	11	0.00034	0.021	16.2	1.7	1	23	356	379	356	379	0.97
8	11	0.0043	0.27	12.7	0.9	2	23	386	408	386	408	0.90
9	11	1.2e-05	0.00072	20.8	0.9	1	23	414	436	414	436	0.99
10	11	1.5e-05	0.00093	20.5	1.9	1	23	442	464	442	464	0.99
11	11	3.6e-08	2.2e-06	28.7	2.3	1	23	470	492	470	492	0.99

Sequence Information

Coding Sequence: ATGAAATCTCATTTAAAAACAGAGGTAGTTTTGGTGTTAAATCAATTCTCAGAAGAAGGTTTCCCAGATGAATCTGATCCGTTGAGTTGCAGAAATATTGGGGATACAAATAACAATGAGAAGCAATTGAACgcaaaattagaaatcaatCGTGACAAATCCGAAGAAGCTTCGTTTTTAGTTTGCAGTGTGAAGAATGAAACAAAGTATTTCATACAGAAAGAACAAATTGATTGTTTTAATAACGGGGAAGCTAGCGTGcacataaaagaagaaaatgacataaatttatccaatgttaaaCAAGAAGTGGAAGAATTTGAAGGGGATGTATATTACAATGAAAATCATGTGAAAGTAGAACAGATTCAGGGTCTAGAAAAGAATCTCTGGATTTGTGATTTATGTGATTTACAGTGTAAAACAAATGCTGCCTTCGTAATTCACTGGAAAACACATAATAGGCATGTAGAATATAAATGCGCGGATTGTGGTTTAAGTGTTGCTTCTAAAAGTGTCTTGATCAAACATATACTCACTCACAGGCAATTTAAGTGTAAAATATGTGGAGGTATGTGTTACTTAGAGGCAAGTTTACATCGTCACATTAAGAAGCATGATCTAGAAGTTGAAACTTATAACAATGTAAAAGAAATCATGAATGTAGACGGAATTGTTGCTAACGATAGTTTAGTGTGTAAAATATGTGATAAATTCTTTACAAGAAGAGAAAACCTTATATTTCACATTCGAACAGCCCACAACGGGCAGAAATTATTTCAGTGTAATATATGCAACAAAACTCTGAGTGATCAGAATTCTCTAGTAGATCACATTAAGTCTCATTCAAGTTCTATTCAATGCAAAAACTGTAACGGACACCTTCAACAAACCAGATCTAAAAATCATAAGTGTCGGATGCCTTGCACATTTACATGCGAATATTGTGATGCCGAGTTTGCTTTAAAACATGCACTTTCCACACACAGGCGAATTCATTTCGAAAAGCCTGACCTGATTATAGAACTTACCTCCGAAAACCGATTTAAAATAAGCCAACGCCCTTATGTATGTTACATTTGTAGTAGGAGTTACAAAAATAGGTTCGGCCTTCGTGATCATCTAAAAAACACTCACGGACCAAAAGTAGTAAGAACCTGTGAGATTTGCAATAAGAGCTACATGACCAAAAAGGCATTTAAAGAGCACAATCTTAACGTGCATCCGAAATCCAAGAAATACAAGTGTGATGTCTGTGGAAAGGCTTTTGTAGCTCGTCATCTAGTCACAAGGCATATGTTAAAGCATACAGGGGAAAAGAAATACCAGTGTGAGGACTGCGGGAAGTTTTTTCAGATGAGTTACACCTTAAAGCTGCACAGGAAAATCCATTTAGATGATAAATCTTTCCAGTGCCATGACTGTggcaaaaaatttattacaaagggCAACTTGCAGATCCATGTGAAaacacatttcaaaaaaaaattttga
Protein Sequence: MKSHLKTEVVLVLNQFSEEGFPDESDPLSCRNIGDTNNNEKQLNAKLEINRDKSEEASFLVCSVKNETKYFIQKEQIDCFNNGEASVHIKEENDINLSNVKQEVEEFEGDVYYNENHVKVEQIQGLEKNLWICDLCDLQCKTNAAFVIHWKTHNRHVEYKCADCGLSVASKSVLIKHILTHRQFKCKICGGMCYLEASLHRHIKKHDLEVETYNNVKEIMNVDGIVANDSLVCKICDKFFTRRENLIFHIRTAHNGQKLFQCNICNKTLSDQNSLVDHIKSHSSSIQCKNCNGHLQQTRSKNHKCRMPCTFTCEYCDAEFALKHALSTHRRIHFEKPDLIIELTSENRFKISQRPYVCYICSRSYKNRFGLRDHLKNTHGPKVVRTCEICNKSYMTKKAFKEHNLNVHPKSKKYKCDVCGKAFVARHLVTRHMLKHTGEKKYQCEDCGKFFQMSYTLKLHRKIHLDDKSFQCHDCGKKFITKGNLQIHVKTHFKKKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00465264;
90% Identity: -
80% Identity: -