Basic Information

Insect: Prosopocoilus inquinatus
Gene Symbol: -
Assembly: GCA_036172665.1
Location: CM069876.1:45005684-45007174[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0083 0.52 11.8 2.2 1 23 3 25 3 25 0.92

2 17 0.035 2.2 9.9 8.1 1 23 31 53 31 53 0.98

3 17 6.1e-06 0.00038 21.7 0.9 1 23 59 81 59 81 0.98

4 17 0.0013 0.083 14.3 1.1 1 23 87 109 87 109 0.97

5 17 0.16 9.9 7.8 2.8 1 23 115 137 115 137 0.97

6 17 4.5e-05 0.0028 18.9 0.6 1 23 143 165 143 165 0.98

7 17 7e-06 0.00044 21.5 0.7 1 23 171 193 171 193 0.98

8 17 0.028 1.7 10.2 6.0 1 23 202 224 202 224 0.98

9 17 0.00014 0.009 17.4 3.5 1 23 230 252 230 252 0.99

10 17 0.026 1.6 10.3 6.7 1 23 261 283 261 283 0.98

11 17 0.00048 0.03 15.7 0.3 1 23 289 311 289 311 0.98

12 17 0.00018 0.011 17.0 6.1 1 23 320 342 320 342 0.98

13 17 0.00023 0.014 16.7 0.8 1 23 348 370 348 370 0.98

14 17 0.0058 0.36 12.3 3.2 1 23 379 401 379 401 0.98

15 17 0.0036 0.23 13.0 0.5 1 20 407 426 407 429 0.94

16 17 2.5e-05 0.0016 19.7 4.4 1 23 438 460 438 460 0.98

17 17 0.00015 0.0096 17.3 3.2 1 23 466 488 466 488 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0083	0.52	11.8	2.2	1	23	3	25	3	25	0.92
2	17	0.035	2.2	9.9	8.1	1	23	31	53	31	53	0.98
3	17	6.1e-06	0.00038	21.7	0.9	1	23	59	81	59	81	0.98
4	17	0.0013	0.083	14.3	1.1	1	23	87	109	87	109	0.97
5	17	0.16	9.9	7.8	2.8	1	23	115	137	115	137	0.97
6	17	4.5e-05	0.0028	18.9	0.6	1	23	143	165	143	165	0.98
7	17	7e-06	0.00044	21.5	0.7	1	23	171	193	171	193	0.98
8	17	0.028	1.7	10.2	6.0	1	23	202	224	202	224	0.98
9	17	0.00014	0.009	17.4	3.5	1	23	230	252	230	252	0.99
10	17	0.026	1.6	10.3	6.7	1	23	261	283	261	283	0.98
11	17	0.00048	0.03	15.7	0.3	1	23	289	311	289	311	0.98
12	17	0.00018	0.011	17.0	6.1	1	23	320	342	320	342	0.98
13	17	0.00023	0.014	16.7	0.8	1	23	348	370	348	370	0.98
14	17	0.0058	0.36	12.3	3.2	1	23	379	401	379	401	0.98
15	17	0.0036	0.23	13.0	0.5	1	20	407	426	407	429	0.94
16	17	2.5e-05	0.0016	19.7	4.4	1	23	438	460	438	460	0.98
17	17	0.00015	0.0096	17.3	3.2	1	23	466	488	466	488	0.98

Sequence Information

Coding Sequence: ATGATATTCAAGTGTCACAAGTGCGATTCAAAGTTTGCGTCCGGAAACGATTTGAAAAATCACCTCCCCAcacataccggcgagaaaccgttcagctgcGACCGTTGCGAATACAGATGTCGACATCGCTGGCATCTCAAGCAACATGTgttgacgcacaacagcgagaGCCAATTTAAATGCGGTCTTTgcgattctaaattcaaaaCGGCCAAAAACCTGAAGGCTCACATGGTGACGCACAGCGATGAGAAGCAGTTTAGCTGCGacgtttgcgattacaagtctCGACGCGCCGATAATATGAAGCTGCACAAGTTaaggcacaccgacgagaagcggTTCAGTTGTActctgtgcgattataaatgcttGGAAACGACGGCGCTTAAACGGCACATGTTGAGCCACAACAGCGAGAAGTCGTTTGTCTGCGGAGTTTGCGACAGTAAATTCGTGCAAATGGCCCACTTGAGACGGCACATGTTGATACACATCGGCGACAGGCCGTACAGCTGTCAAGTTTGCGATTACAAGGGTCGAGACGCCTCTCAATTGAAGCGGCACATGTCGACGCATTTTCCCGACACGGCCGAGAAGCGGTTCAGTTGTGACGTTTGCGATTACAAAAGCCATCGCAGCGAGCACATGAAAAGACACAAActgacgcacaccggcgagaaaccgttccaGTGTGATCTTTGCGATCACAAGAGTCGAGATAGCTCGATGTTGAAACGACACAGACTGACGCATTCCGAAGACGCCGCCGATTTGCGGTTTAGTTGTAACCTTTGCGACTACAAATGCCAACATAACGAACTACTGAGAAGACATAAGTTGAGACATGCCAACTGGAAGCCGTTCGAATGTGAGCTTTGTGATTATAGGGGGCGAGACATCTCGGTGTTGAAGCGACACATGTTGACACATTTCCCCGACGACGCCGACAAGCGGTTTAgttgcgacctttgcgattacaagtgtcaACGAAACGAACATCTGAAAAGACACATGCTGACGCACACCGCCGAGAAGCCGTTCAATTGTGATCTGTGTAATTACAGGGGGCGAGACAGCTCGGTATTAAAGCGACACATGCTGACACACGCCGACGAGATCTCCGGGAATCGATTCAGTTGCGACcgttgcgattacaaatgtcaGCTAAACGAACAGTTGACGAGTCACATGTTAACGCACatcggcgagaagccgttcgagTGTGAGCTTTGCGATTACAGTGGGCGGGACATCTCGCAGTTGAAGCGACACAGGTGGAAACACTTTTCTGACGCCCGCGAGAGGCGGTTCAGTTGTAACCTCTGCGAAAGCAAATTCCGGCGGAACGAACACTTGAGAAAACACATGTTGACACACTCCGGCGAGAAGCCcttcagttgtgacctttgcgattataaatgccgacaaaaGTGGGATTTGAAGAAGCATTGGCTAACGCACGGCCGAAAGGAAGCTGCTCAGTTGTGA
Protein Sequence: MIFKCHKCDSKFASGNDLKNHLPTHTGEKPFSCDRCEYRCRHRWHLKQHVLTHNSESQFKCGLCDSKFKTAKNLKAHMVTHSDEKQFSCDVCDYKSRRADNMKLHKLRHTDEKRFSCTLCDYKCLETTALKRHMLSHNSEKSFVCGVCDSKFVQMAHLRRHMLIHIGDRPYSCQVCDYKGRDASQLKRHMSTHFPDTAEKRFSCDVCDYKSHRSEHMKRHKLTHTGEKPFQCDLCDHKSRDSSMLKRHRLTHSEDAADLRFSCNLCDYKCQHNELLRRHKLRHANWKPFECELCDYRGRDISVLKRHMLTHFPDDADKRFSCDLCDYKCQRNEHLKRHMLTHTAEKPFNCDLCNYRGRDSSVLKRHMLTHADEISGNRFSCDRCDYKCQLNEQLTSHMLTHIGEKPFECELCDYSGRDISQLKRHRWKHFSDARERRFSCNLCESKFRRNEHLRKHMLTHSGEKPFSCDLCDYKCRQKWDLKKHWLTHGRKEAAQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -