Basic Information

Insect: Prosopocoilus inquinatus
Gene Symbol: -
Assembly: GCA_036172665.1
Location: CM069879.1:12067438-12072405[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00061 0.038 15.4 1.4 2 23 268 289 268 289 0.97

2 14 0.059 3.7 9.1 0.6 2 23 296 317 295 317 0.96

3 14 2.4e-06 0.00015 22.9 4.3 1 23 323 345 323 345 0.99

4 14 0.039 2.4 9.7 0.1 2 23 352 374 351 374 0.94

5 14 7.1e-06 0.00044 21.5 0.2 1 23 379 401 379 401 0.98

6 14 0.00038 0.024 16.0 1.0 1 23 410 433 410 433 0.95

7 14 0.0013 0.079 14.4 0.8 1 23 441 463 441 463 0.97

8 14 7.1e-08 4.4e-06 27.8 0.6 2 23 470 491 469 491 0.98

9 14 3.7e-05 0.0023 19.2 3.9 1 23 497 519 497 519 0.99

10 14 0.0027 0.17 13.4 2.2 1 23 525 548 525 548 0.96

11 14 0.007 0.44 12.0 0.2 1 23 595 617 595 617 0.98

12 14 5.9e-06 0.00037 21.7 2.7 1 23 623 645 623 645 0.99

13 14 0.00033 0.021 16.2 3.1 2 23 655 676 654 676 0.97

14 14 4.5e-05 0.0028 18.9 2.3 1 23 682 704 682 704 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00061	0.038	15.4	1.4	2	23	268	289	268	289	0.97
2	14	0.059	3.7	9.1	0.6	2	23	296	317	295	317	0.96
3	14	2.4e-06	0.00015	22.9	4.3	1	23	323	345	323	345	0.99
4	14	0.039	2.4	9.7	0.1	2	23	352	374	351	374	0.94
5	14	7.1e-06	0.00044	21.5	0.2	1	23	379	401	379	401	0.98
6	14	0.00038	0.024	16.0	1.0	1	23	410	433	410	433	0.95
7	14	0.0013	0.079	14.4	0.8	1	23	441	463	441	463	0.97
8	14	7.1e-08	4.4e-06	27.8	0.6	2	23	470	491	469	491	0.98
9	14	3.7e-05	0.0023	19.2	3.9	1	23	497	519	497	519	0.99
10	14	0.0027	0.17	13.4	2.2	1	23	525	548	525	548	0.96
11	14	0.007	0.44	12.0	0.2	1	23	595	617	595	617	0.98
12	14	5.9e-06	0.00037	21.7	2.7	1	23	623	645	623	645	0.99
13	14	0.00033	0.021	16.2	3.1	2	23	655	676	654	676	0.97
14	14	4.5e-05	0.0028	18.9	2.3	1	23	682	704	682	704	0.98

Sequence Information

Coding Sequence: ATGAGTAACGAAATAATGCAATTATGCAGACTTTGTTTAGTGAAAGACCAAGCGAACGTTCCTATTTTCGCAGAGCACAACGACAGACAAATATTTGTGAAAATTACCGCGTGCCTGCCTATCAGGGTCTCTAAAGATGACAGTTTACCCAAAAAGATTTGCGACCCCTGCCTGGAGAAATTAGATTCGCTGTATCAATTTTGGAACACGACTGCGAATGCGGAGAAGCAGTTACTGACATGGTTGGGGGAAGCCGTTGCAGACACGGAATTCAAGGTGATTCAAGAGGCTCTGCCCCCCATACAAACAGAGATACATTCCATCAAGCAGGAAGAGTTAGATCCTCTGGATAGTGTGCTGGAGGATGAGAGTTTCGTCTCATGCCCCCCTACACAATCACTCATTCAAGAGCCAGTAGGATTCACCGAATCTCcagTGGGCATTGAGGCGGAAGGTTTTCGAAACAACCGTTTCCTGAAAGTAACTCGGGATTACTCTGCGTCTGCCCCCGCAAAAAGGCGGAAGCTGCAAGTTGTTCCCAAATTAGTGGTGGTTAACGATGATAATGCAAATAGCGGCAAAGACATTCACAGACCTTCAATAGCGACTGTTATCGTTAAGACTGAGAAAGACAATGAAAGTATTGATGCCGAGGATATGAGTAAAAACCCGCAGATAAATTTCGTGCAAAATGAAATGCACGGCAAAGAACAATCAGAGGTGTTTGGGGTGCAAAAGGATGCCCACGAGAAAATTCTTCAGAAAAAGTCGGCCAAGTTATTTCAAGTACCGAGCACGGGGCAGTGCCAAATTTGCGCGAAGGTTTTCCTACGAAGGGGCCACCTAAAAAGGCACATGCTGGCCCACACAGAGGAGAGGCCGATCTCCTGTGATGTCTGCTTCATGCGTTTCAAGGACAAGTTCGCGATGGGGGCGCACAGGAAATACCACAGCGACGCCAAACCCTTCAAATGCAACACTTGTGACAAGACCTTCAAGCGCAAGGTCTCCTTGGAATATCACTACCGGCGACACATCAAGGATTACAAGATTACGTGCGAGATTTGCAACGCTGGGTTTTACACGGATGCCGATTACAAGTTGCACATGGGTTCTAGGCACGGCCAAAGCAGTTACGTCTGCCCGATTTGCAACAAAGCCCTGTATAATAAGGACGGGTTGAATAAGCACATGCTGCAACATGCCGATGATTACAAAGAGGCGAAGTACAAGTGTGATTTGTGCGGGAAGAGTTTCTTGCAGGAGAGGTATTTGAAGAATCACATCGATAACCAGCACACTGATGGCTTGCGCAAGGAGTACGTCTGTGATTTGTGTGGGAAAAAGCTTTGCTCCGGCACGAGTTTGAGGGCGCATCAATTATTACACGAGGGTATTAAACCCAACAAGTGCGGGATATGCGGGAAGGGTTTCAATTCGAAATCAAATTTGACAGTCCACTTGCGCACTCATACAGGCGATAGGCCCTACAGGTGTGAACACTGCAGTAAGGCCTTCACACAGAGAAACACTTACGTTATTCACATGAGGTATCACACTGGTGAACGGCCTTATGTATGTCAGTTATGTGATACTGGTTTTATTAGCCGAACCACTTTAAATTTACatcacaaaaataaacataacatAAAACACAAGACTTACAGCTCGCTTCGAGTACAGAAAACGGAAGAAAAgttcttcaaaaacaaaacgatcATAAACAGTCCGGCCACCTCCAAACACAATTCTAGCCACCACACCGGCGGCGATTCAAAGCAATACAATTGCAACCTCTGCAGTTACAGGGGCACCGAAGCCCCAAGCTTAAAAAAGCACATGTTAATACACATTGGCGAAAGACTCTTCAAGTGTGACCTTTGCGACTACAGGTGCAGGACGTCCGAGGACTTGGAAAGGCACATGCTGACGCACGCGGGGGAAAACCGTGATAAGCCCTTGAAGTGTAACCTCTGCGATTACCGGTGCAGTTTCTCAGCGTACTTAAAAAAGCACATACTGACTCACACCGGGGAGAAGCCGTTCAAGTGCGAcgtctgcgattacaaatgcaatCAGCCCTGGAGCTTGAAGAGGCACATGGTTCGACATGCCTCGAAAAAGCCGGCGAAGCGCAACGCTCGAAACAAAAAGAAGTCAGGTCGATCTAATAGAAAGTCATAA
Protein Sequence: MSNEIMQLCRLCLVKDQANVPIFAEHNDRQIFVKITACLPIRVSKDDSLPKKICDPCLEKLDSLYQFWNTTANAEKQLLTWLGEAVADTEFKVIQEALPPIQTEIHSIKQEELDPLDSVLEDESFVSCPPTQSLIQEPVGFTESPVGIEAEGFRNNRFLKVTRDYSASAPAKRRKLQVVPKLVVVNDDNANSGKDIHRPSIATVIVKTEKDNESIDAEDMSKNPQINFVQNEMHGKEQSEVFGVQKDAHEKILQKKSAKLFQVPSTGQCQICAKVFLRRGHLKRHMLAHTEERPISCDVCFMRFKDKFAMGAHRKYHSDAKPFKCNTCDKTFKRKVSLEYHYRRHIKDYKITCEICNAGFYTDADYKLHMGSRHGQSSYVCPICNKALYNKDGLNKHMLQHADDYKEAKYKCDLCGKSFLQERYLKNHIDNQHTDGLRKEYVCDLCGKKLCSGTSLRAHQLLHEGIKPNKCGICGKGFNSKSNLTVHLRTHTGDRPYRCEHCSKAFTQRNTYVIHMRYHTGERPYVCQLCDTGFISRTTLNLHHKNKHNIKHKTYSSLRVQKTEEKFFKNKTIINSPATSKHNSSHHTGGDSKQYNCNLCSYRGTEAPSLKKHMLIHIGERLFKCDLCDYRCRTSEDLERHMLTHAGENRDKPLKCNLCDYRCSFSAYLKKHILTHTGEKPFKCDVCDYKCNQPWSLKRHMVRHASKKPAKRNARNKKKSGRSNRKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00465218;
90% Identity: -
80% Identity: -