Pinq024073.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Prosopocoilus inquinatus
Gene Symbol
-
Assembly
GCA_036172665.1
Location
CM069876.1:44744858-44772294[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 36 0.042 2.6 9.6 4.4 1 23 47 69 47 69 0.96
2 36 0.00036 0.023 16.1 3.3 1 23 75 97 75 97 0.98
3 36 0.0036 0.23 12.9 0.3 3 23 105 125 103 125 0.96
4 36 0.00027 0.017 16.5 1.7 1 23 131 153 131 153 0.98
5 36 1.6 1e+02 4.6 5.7 1 23 159 181 159 181 0.96
6 36 0.1 6.3 8.4 2.4 2 23 265 286 264 286 0.97
7 36 0.0075 0.47 12.0 2.1 1 23 292 314 292 314 0.98
8 36 0.0084 0.52 11.8 9.2 1 23 320 342 320 342 0.97
9 36 3.4 2.1e+02 3.6 4.1 1 23 348 370 348 370 0.93
10 36 0.039 2.4 9.7 1.1 1 23 376 398 376 398 0.97
11 36 0.0055 0.34 12.4 3.8 1 23 404 426 404 426 0.99
12 36 1 64 5.2 1.8 1 23 432 454 432 454 0.97
13 36 9.7e-08 6.1e-06 27.3 0.9 1 23 503 525 503 525 0.99
14 36 0.0015 0.093 14.2 4.6 1 23 531 553 531 553 0.98
15 36 0.0068 0.42 12.1 0.4 2 23 560 581 559 581 0.97
16 36 0.12 7.4 8.2 0.6 1 23 586 608 586 608 0.96
17 36 0.024 1.5 10.4 3.9 1 23 614 636 614 636 0.99
18 36 1 63 5.3 3.9 1 21 642 662 642 667 0.93
19 36 0.00018 0.012 17.0 1.4 1 23 718 739 718 739 0.99
20 36 0.0013 0.083 14.3 2.7 1 23 745 767 745 767 0.99
21 36 0.00048 0.03 15.7 0.9 1 23 773 795 773 795 0.98
22 36 0.67 42 5.8 2.0 1 23 801 823 801 823 0.95
23 36 0.0068 0.42 12.1 1.8 2 23 830 851 829 851 0.96
24 36 0.0016 0.1 14.1 2.9 1 23 857 879 857 879 0.98
25 36 0.022 1.4 10.5 1.2 1 23 885 907 885 907 0.98
26 36 0.99 62 5.3 2.9 1 23 913 935 913 935 0.98
27 36 0.84 52 5.5 0.4 1 11 941 951 941 954 0.84
28 36 0.18 11 7.6 5.6 1 23 986 1008 986 1008 0.98
29 36 0.0038 0.24 12.9 2.1 1 23 1014 1036 1014 1036 0.97
30 36 0.18 11 7.6 1.8 1 23 1042 1064 1042 1064 0.98
31 36 0.0055 0.35 12.4 0.6 1 23 1069 1091 1069 1091 0.97
32 36 0.05 3.1 9.4 0.2 1 23 1097 1119 1097 1119 0.98
33 36 0.68 42 5.8 2.4 2 19 1126 1143 1125 1147 0.93
34 36 0.00069 0.043 15.2 0.1 1 23 1153 1175 1153 1175 0.97
35 36 0.0051 0.32 12.5 0.6 1 23 1181 1203 1181 1203 0.98
36 36 0.02 1.3 10.6 5.6 1 23 1216 1238 1216 1238 0.99

Sequence Information

Coding Sequence
ATGGTCGTGGTCGAAGAATTTTTTGGCCATCACAGGAGATGCTTTACCCAGAAGGACTTGGAGAATGTTTTTCGTAAGCGTTGCGTCGTCGTTTTGACTCGCCGCGAATCAACGGGAACGAAGGAACAAGACAAGAGACACGAATGCGATATTTGCGGCTATAAATGTAAGCACCTGGGTGTTTTGAAGAACCACCTCTTCATACACACCGGTGAGAAACCGTTTAAGTGTAACGAGTGCGATTATAGGTGCAACTTTCGCGGAAATTTACGTAAACATGTGTTGATacacaccgatgagaagccTTTCGGATGTCAGATATGTGAATTGAAATTCAGAACCgcgcaacaattaaaaaatcacgGTTTAGTGCACACCGGTGAAAAACCGTTTAAATGTGTCAAGTGCGATTATAAGACTAGTCAGCGTGGAAATATGCGACGACATTTAATGGTCCACAATAACGAAAAACCTTTCAGTTGCAGCAAGTGCGATTATAGTTGTAGAGGTTTGCACAGATTTAAAGCGCACGTTTCGCAGCACAACGGTGAAAATCCGTTTATGTGTAGCAAATGCGATTACAGGAGACGCATTACTCAGAAAGacttggaaaatatttttcgcagACGTTGCTACGTCGTCTTGAACCGTTGCGAAGTGCCAACCGCAGAAAAACAACAGAAACTCGGTAACTGCGAGATTCTGTACAGATGCGATCACTGCTGTTACAAGTGCAAGAAGCTCGAAACGTTCGAGACTCATCTGGCGACGAAGCACACCGTCCTACCTCTAAAATGTAACatatgcgattataaatgcgtAAAGTCAGAGATCTTAAGAAATCATGTTAAGAGGCACATCGAGGAAAAACCGTTTAAATGCGAGAAATGCGACTACAAAACCAGCAAACCTAATTCTCTGCTTGAACACTCAAAGAAACACACTAGCGAAAAGCCGTTCGCATGTAACATATGCGACTTTAGATGTAAACACAAGCACAATCTAAAAACCCACGTTAAgaaacacaccggcgaaaaaccGTTCAAGTGCAGCAAGTGCGGATATTGCTGCTGGGAACTTGCAATCTTACGTAAACATTTAATGACACACGGTGGCGAAAAGcctttcaaatgtaacatatgCGATTTTAGAACTATGTACCGAAACGGTTTGAAAACCCACGTCTTGCTGCACACCGGTGAGAAACCGTTTAAGTGCAGCAAATGCGATTACCAGTGCAGAGAGCGTGGAGTGTTAAGGCGACATTTAATGACGCACGTTAAGGAGAAGCCTTTCAGATGTAACGCGTGCGATTTCAAAACTGTCTACCGACACGTCTTGAAAAGCCACGTCCTCATACACACCGGTGAGAAACCGTTTAAGTGTAGCAAatTAAACGAAAACGCCTCGACGAATCTCGCCCGTAAACGCTTCGTCACCGCCGGCTTGATCTGCTTCGGCCAACCACCGAAGGCCAAAACGATCAAACCCCCCACCGAAAGCCTATTCAGATGCGtcatttgcgattataagttcACGCAACCGGCGAACTTAAAACGTCACATGAtgacgcacaccggcgaaaaaccGTACGCATGTCACGCGTGCGATCGCCGATGCAGGACCAAGCAGAACTTAAAAGAGCACGTCATgacgcacaccgacgaaaaACCGCTTAAATGCGGCGACTGCGAGTACAGGGCCCGGACGCACAGCGCCCTAAACGCGCACCTGGTGACGCACACCGGAAACTGGTTCGCGTGCGGCGCTTGCGGTTACAAGTGTAAGAGCGCCGTTCGCTTAAAGTTGCACGCGATGACGcataccgacgagaaaccgttcaaaTGCACCGCGTGCAGCTACAGGTGTCGGTTAAAATCGACTTTAAGAGATCACATTTTGACGCACACCGGCGGGAAACCGTTTAAATGTACGGCATGCGAGTACGAATGCAAAACTCGCAGGAGTTTCTCCCGACATCTTGAAAGGCGTACCGAGCATTCGCTGACACATACCAGCGAAAATCATACCAAGTGTGAAGCTTTGTGGTTCggGCACCGAGAAGATCCCCTGTCGAGACGGTTCAGTTTCAGCGACCTCTGCTCGGCTCAGAACAAGAAAAGGGGCCGAAAGAAGCTCCCCGACGTTGTCTTCAAGTGCCCCCTCTGCGACTTCACGACCCGAGCCGGAACTCTAAAGAGACACATGCggaaacacaccggcgagaaaccgttcaaaTGCGACTTGTGCGACTTCAGATGCAGCATCTCCTCGAACTTGCGCAGCCACGTGCTGACGCACAGCGTCGAGAGGCTCTACAAgtgcgacctctgcgattatcGCAGCAAGGTCCCCGCGCAGCTAAAGCGACACACGTTGAAACACACCGGCGCGAAGGCGTTCAAATGTCACGTCTGCGATTACGCCAGCTCATGCGTCAACGCGTTAAAACGGCACGCGTTGATCcacaccggcgaaaagccgTTGAACTGTAAGCTTTGCGATTACAGGAGCGCAAGCTCGTGGCATATAAAGCGGCACATGCTGACGCACGCCAATCAAAAGACGTTCAAGTGCAGCTTGTGCGATTTCCGGTGTAATGCATCGGGAAACTTGAAGAAGCACATGACGGTGCATACCGCCGAGAAACCTTTCAAGTGTAATTCCTGCGAGTACCGGAGCAGGGATCGCGCAAGCTTGAAGCTGCACGCGCTGAAACACAGCGGCGAGAAGCCCTTCAAGTGCACGGTGTGCAGTTACGAATGTCGCTGGCCTACGAATTTAAGGTTTCATATGTTGACGCATACCGGCGAGATGCCGTACGAATGTAAGGATTGCGGCAAAAAgcGTAACCGAAATCTCTCGGCGTCGGCGTCGCCCTGTTTCGTTTTCTCCACTCCCCAGGCGACGCcccaaacaaaagagaaacctGTAAAAAGAACGGACGAGAAATTCTTCAAATGCAACCTCTGCGACTACAACAGCTATTGCACCCGCAATTTGAAGAGACACATGAtgacgcacaccggcgaaaaaccGTTTAAATGCGACACGTGCGGCTTCAGGAGCAGGACGTCCACAAGCCTGAAAAACCACTCGGAAATGCACAATACTGAAAAGCTTCACAAGTGCAGCGCATGCGATTACGAGACCTACGTGCTCGGTCTATTCAAGCGGCACATGTTGAGACACCGCGGAAACATCTTCAAGTGCAACCTCTGCGACTACGCGACCTGGCGGCAGAGCGGTCTGAAGAGGCACTTGGTGAGACACACCGACGAAAAACCGTTCGAATGTGACGTGTGCGACTTTAAAAGCAACGCCCTTCCGAATTTAAAGGCGCACAAGTTGACGCACAACGCCGAGAAACTCCTCAGGTGCACCGTTTGTGATTACAAGTGCAATTATCCTTTGCTTTTAAGGCGACACTTCTGGAAGCACACTCAAGAGAAGCCGTACAAGTGTAACATCTGCAACTATGCAAGTCGTTATCCGGGCGCCTTGAAAAGTCATTTGTTGGCACACGCCGGCGAAAAGCCGTTCAAGTGTAGCCTTTGCGATTTCAGGGCGACGAGTCCTGCGTACCTCAGGCAGCACAAGGCGACACACAAGAGTGGGAATCGGAAACCCGCCGATGAGGAGTGGTACAAATGTAATCTGTGCACTAAAAAGTATAAGTATTCTAAGTGTTTAGATACGCATGTGTTGACGCACACTGACGAAAAGCGACCGACCATCTGA
Protein Sequence
MVVVEEFFGHHRRCFTQKDLENVFRKRCVVVLTRRESTGTKEQDKRHECDICGYKCKHLGVLKNHLFIHTGEKPFKCNECDYRCNFRGNLRKHVLIHTDEKPFGCQICELKFRTAQQLKNHGLVHTGEKPFKCVKCDYKTSQRGNMRRHLMVHNNEKPFSCSKCDYSCRGLHRFKAHVSQHNGENPFMCSKCDYRRRITQKDLENIFRRRCYVVLNRCEVPTAEKQQKLGNCEILYRCDHCCYKCKKLETFETHLATKHTVLPLKCNICDYKCVKSEILRNHVKRHIEEKPFKCEKCDYKTSKPNSLLEHSKKHTSEKPFACNICDFRCKHKHNLKTHVKKHTGEKPFKCSKCGYCCWELAILRKHLMTHGGEKPFKCNICDFRTMYRNGLKTHVLLHTGEKPFKCSKCDYQCRERGVLRRHLMTHVKEKPFRCNACDFKTVYRHVLKSHVLIHTGEKPFKCSKLNENASTNLARKRFVTAGLICFGQPPKAKTIKPPTESLFRCVICDYKFTQPANLKRHMMTHTGEKPYACHACDRRCRTKQNLKEHVMTHTDEKPLKCGDCEYRARTHSALNAHLVTHTGNWFACGACGYKCKSAVRLKLHAMTHTDEKPFKCTACSYRCRLKSTLRDHILTHTGGKPFKCTACEYECKTRRSFSRHLERRTEHSLTHTSENHTKCEALWFGHREDPLSRRFSFSDLCSAQNKKRGRKKLPDVVFKCPLCDFTTRAGTLKRHMRKHTGEKPFKCDLCDFRCSISSNLRSHVLTHSVERLYKCDLCDYRSKVPAQLKRHTLKHTGAKAFKCHVCDYASSCVNALKRHALIHTGEKPLNCKLCDYRSASSWHIKRHMLTHANQKTFKCSLCDFRCNASGNLKKHMTVHTAEKPFKCNSCEYRSRDRASLKLHALKHSGEKPFKCTVCSYECRWPTNLRFHMLTHTGEMPYECKDCGKKRNRNLSASASPCFVFSTPQATPQTKEKPVKRTDEKFFKCNLCDYNSYCTRNLKRHMMTHTGEKPFKCDTCGFRSRTSTSLKNHSEMHNTEKLHKCSACDYETYVLGLFKRHMLRHRGNIFKCNLCDYATWRQSGLKRHLVRHTDEKPFECDVCDFKSNALPNLKAHKLTHNAEKLLRCTVCDYKCNYPLLLRRHFWKHTQEKPYKCNICNYASRYPGALKSHLLAHAGEKPFKCSLCDFRATSPAYLRQHKATHKSGNRKPADEEWYKCNLCTKKYKYSKCLDTHVLTHTDEKRPTI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-