Basic Information

Insect: Prosopocoilus inquinatus
Gene Symbol: -
Assembly: GCA_036172665.1
Location: CM069874.1:356291-357916[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0005 0.032 15.6 1.4 1 23 75 97 75 97 0.96

2 14 5.2e-05 0.0033 18.8 0.3 1 23 141 163 141 163 0.97

3 14 6.7e-07 4.2e-05 24.7 3.5 1 23 187 209 187 209 0.99

4 14 2.2e-07 1.4e-05 26.2 0.9 1 23 215 237 215 237 0.98

5 14 0.00016 0.01 17.2 0.7 1 23 243 265 243 265 0.98

6 14 2.7e-06 0.00017 22.8 4.8 1 23 271 293 271 293 0.98

7 14 7.1e-05 0.0044 18.3 2.7 1 23 299 321 299 321 0.97

8 14 6.1e-06 0.00038 21.7 1.3 1 23 327 349 327 349 0.98

9 14 0.0061 0.38 12.3 0.2 1 21 356 376 356 377 0.93

10 14 3.4e-06 0.00021 22.5 0.8 2 23 385 406 384 406 0.97

11 14 8.7e-05 0.0055 18.0 2.5 1 23 412 434 412 434 0.98

12 14 1.9e-05 0.0012 20.2 5.6 1 23 440 462 440 462 0.98

13 14 6.3e-05 0.0039 18.5 1.6 1 23 468 490 468 490 0.96

14 14 0.00032 0.02 16.3 0.2 1 23 496 518 496 518 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0005	0.032	15.6	1.4	1	23	75	97	75	97	0.96
2	14	5.2e-05	0.0033	18.8	0.3	1	23	141	163	141	163	0.97
3	14	6.7e-07	4.2e-05	24.7	3.5	1	23	187	209	187	209	0.99
4	14	2.2e-07	1.4e-05	26.2	0.9	1	23	215	237	215	237	0.98
5	14	0.00016	0.01	17.2	0.7	1	23	243	265	243	265	0.98
6	14	2.7e-06	0.00017	22.8	4.8	1	23	271	293	271	293	0.98
7	14	7.1e-05	0.0044	18.3	2.7	1	23	299	321	299	321	0.97
8	14	6.1e-06	0.00038	21.7	1.3	1	23	327	349	327	349	0.98
9	14	0.0061	0.38	12.3	0.2	1	21	356	376	356	377	0.93
10	14	3.4e-06	0.00021	22.5	0.8	2	23	385	406	384	406	0.97
11	14	8.7e-05	0.0055	18.0	2.5	1	23	412	434	412	434	0.98
12	14	1.9e-05	0.0012	20.2	5.6	1	23	440	462	440	462	0.98
13	14	6.3e-05	0.0039	18.5	1.6	1	23	468	490	468	490	0.96
14	14	0.00032	0.02	16.3	0.2	1	23	496	518	496	518	0.97

Sequence Information

Coding Sequence: ATGCGTTCGGCGGCTGCAGAAAATAGAATACAAAAGCATGTTGAAGAACGTAAACAAACGGAAGGTGTTTTCGATCTCGCAGAGTTATTCGAAACCCCCGCGAGCACTTATGATCAGCTAACAACGAGTAATGTGAGCGATTCAGGTTACTGGTGTGCGCAGTGCAACCAGAGTTTTCCAAACAGTTTATTACACATCAGGTCACACATTTACAGAAAGCCGCATAAGTGTGAGGAATGTGGGAAGTTATTTAACGAAAAGGAAAAGTTAATTAAGCATAGTGCTTCGCATGGCTGCAACAGCGTAAACGATGGAGATGACAAGGTTAATCCAAACGCAGATGATGCGGAGCgtaaatgtgaaattaatttgaaagacgAGTTGGCTGCGCAACAGAAGACAGCGCATGCGACGAAGCTTTTCGAATGTAAAATCTGTGAGCAGTCCTTTGCTCTGAAGGTCGAGTTGAAATCGCATATGTCGTTGCATGCCAACAAGAAACCGTATTTTTGTAAGTGTTGCAGTCAGGGGGAACATGTCGCTTCGCGCAAGTCATTATTTCAATGTGAAACCTGCGGCAAGTGCTTCAGCGTCAAGACCTACTTAATCAATCACTTAAGAACGCACTCAGACGCAAGGCCCTACGATTGCACGGTCTGTGACAAGTCGTTTCGCACGCCCAACGGCTTGCGCACGCACATGAAATCCCATTTAGATGAGAAACCTTTCGAGTGCCCCTTTTGCAAGCTGAAGTTCAGATCTAACGGCGATAAGACCGTCCACATTCGGATCCACACCGGTAATAAACCGCATAAATGCAGCTACTGCGATCAGGCTTTCACGAGGGCCCAACACCTTAAACGTCACTTGATAACCCACACGGGCGAGCGGCCCTTTCATTGCAACTTGTGCACCAAAGCGTTCAGCGAGAAAGCCAGCTTGAAAAACCACCTCCTCCGTCACAGCGGTACTAAACCCTACCGTTGCAAAATCTGCGATAAACAGTACAGTTTGAGGAGCAGCCTGCAATCGCATCTCAATATTCACCAACATAATAAAGACGCTTTCGCTTGCGGCACCTGCAAGAAACTCTTCACTTCTCAACCGAGTCTCGCTCAACACGTCAAGTCCTGCAACGGAATGAAAGCTTTGGTCTGTGAAGTCTGCGAGCGAAGCTTCAGCTCGAAACGGTTCCTTGAGAATCACATGCGTTCGCACACGGGGGAAAAGCTGTTTCAATGCGAGACCTGCGGAAAATGCCTGGCTCACAAAAACAGCCTCGAGGGGCACATACGGTTGCACAGCGACTTGAGACCGTTCGAGTGCAAGTACTGCCACAAGCGTTTCAACACGCAGGGGTACCTCAATGTGCACAAGCGATATCACACAGGAGAGAAGCCCTTCGCTTGCACCATATGCGAGAAGCGGTTCGTGGAGCGGAACCATCTAAATAGGCACGTGCAGTTGCACAACGGCCCGAGGCCGTACATTTGTTTGGTATGCCGTAAGACATACGCGAGCAAGGCTGACCTGAACGAGCACGAGAAGATTCACAAGGGGGTGCAACGCAAGCGAGTGACCAGGATTAAGTGCATCgctgaagaaaaagaagaaaacaatacCTGA
Protein Sequence: MRSAAAENRIQKHVEERKQTEGVFDLAELFETPASTYDQLTTSNVSDSGYWCAQCNQSFPNSLLHIRSHIYRKPHKCEECGKLFNEKEKLIKHSASHGCNSVNDGDDKVNPNADDAERKCEINLKDELAAQQKTAHATKLFECKICEQSFALKVELKSHMSLHANKKPYFCKCCSQGEHVASRKSLFQCETCGKCFSVKTYLINHLRTHSDARPYDCTVCDKSFRTPNGLRTHMKSHLDEKPFECPFCKLKFRSNGDKTVHIRIHTGNKPHKCSYCDQAFTRAQHLKRHLITHTGERPFHCNLCTKAFSEKASLKNHLLRHSGTKPYRCKICDKQYSLRSSLQSHLNIHQHNKDAFACGTCKKLFTSQPSLAQHVKSCNGMKALVCEVCERSFSSKRFLENHMRSHTGEKLFQCETCGKCLAHKNSLEGHIRLHSDLRPFECKYCHKRFNTQGYLNVHKRYHTGEKPFACTICEKRFVERNHLNRHVQLHNGPRPYICLVCRKTYASKADLNEHEKIHKGVQRKRVTRIKCIAEEKEENNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -