Pinq002903.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Prosopocoilus inquinatus
Gene Symbol
-
Assembly
GCA_036172665.1
Location
CM069869.1:65688929-65697657[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 2.3 1.4e+02 4.1 0.5 2 20 161 179 160 179 0.96
2 25 0.0088 0.55 11.7 3.1 1 23 185 207 185 207 0.95
3 25 0.19 12 7.6 0.7 2 21 284 303 283 304 0.93
4 25 0.044 2.8 9.5 1.0 1 23 308 330 308 330 0.96
5 25 7.1 4.4e+02 2.6 1.8 2 19 389 406 388 406 0.96
6 25 0.00064 0.04 15.3 7.3 3 23 407 427 407 427 0.99
7 25 0.0011 0.07 14.6 0.6 1 23 436 458 436 458 0.97
8 25 8.8e-05 0.0055 18.0 2.2 1 23 464 486 464 486 0.97
9 25 4.4e-05 0.0027 19.0 2.1 1 23 492 514 492 514 0.98
10 25 0.00035 0.022 16.1 2.2 1 20 520 539 520 543 0.95
11 25 0.0001 0.0065 17.8 0.1 1 23 549 571 549 571 0.94
12 25 1.1e-05 0.0007 20.8 4.2 1 23 578 600 578 600 0.98
13 25 9e-05 0.0056 18.0 5.0 1 23 606 628 606 628 0.97
14 25 2.9 1.8e+02 3.8 0.2 2 20 704 722 703 724 0.94
15 25 0.046 2.8 9.5 1.0 1 23 728 750 728 750 0.96
16 25 0.017 1.1 10.8 0.4 2 21 801 820 800 821 0.93
17 25 0.086 5.4 8.6 1.3 1 23 825 847 825 847 0.97
18 25 7 4.4e+02 2.6 1.3 2 21 867 886 866 887 0.93
19 25 6.6e-05 0.0041 18.4 7.4 1 23 897 919 897 919 0.99
20 25 0.00078 0.049 15.0 2.0 1 23 943 965 943 965 0.98
21 25 1e-05 0.00063 21.0 1.1 1 20 971 990 971 991 0.96
22 25 0.00094 0.059 14.8 0.3 3 23 1002 1022 1000 1022 0.91
23 25 4e-05 0.0025 19.1 2.6 1 23 1029 1051 1029 1051 0.98
24 25 7.1e-06 0.00044 21.5 5.0 1 23 1057 1079 1057 1079 0.97
25 25 3.6e-05 0.0022 19.3 4.0 1 23 1085 1107 1085 1107 0.98

Sequence Information

Coding Sequence
ATGGCTAAAGTATGTAGGCTTTGCTTGAAAATAATAGGCGATGCGTATTATTCCATCGATGAAAACGCTGTAGTGAGAAGTCGaaacaaaattatgattttaatgCCAGAACTGGAACTCAACGTTGTCGCCGAGCCTGTTCTTTGCTCCTTATGCTACGGTACGTTACATGTCGCATACGAATTCAAATGCAGCTGCTTGGCCAACGAGCAAAGAATTACCGAGTATTTGAAGAACGATAAGCGGCCCCCAGTGAATTTATGCGACTTATTGGAAGAAACCGATTCGAAGAATGTGATGTCACCGGGATTAACGAGCGAAAACTTTGGAATAAATGTAAATGCGTTGGAGCCggtgaagaaagaaaatattttaaagccaGAGCCGCTGGAGGTTTTGTGTGAGGTTGAGAATGTGTACGCTGACTCATTTAAGGAAACGAATGCGGAAAGGAATGAGGCCCCAGTTAAAGGTGGGATGAAATGTACGAAATGTTCCAGTGAATTTATCGCATTAAAGGATTATAGAAAGCACATGCCACAATGTACAAACTATGAGTGTGAtacatgtaataaaaaattcaagttaaagAGCAGATTTGTAAAACATAAGTCAGCACATCGTACGGATGCTGGGAAAGATATGGAGACCGCACCAAAAGATACAGACAGGGAAATGAGTACAAGTCCTGAACCAGAACAAGATGTAAATAATCAACCGCTAAATAAAAACCATGTGAGTCCTGAGCCAGAGCAAGATAAAAGTAGTGACTCAGAAAGTAAAGTATGTGAAAGTATCATTCCAAAAGAAGATATAAGCGATCTGTCTCAGGTGTCTACAGGAAGTGTCAAGTGTTCAAATTGCTCCACTGAGTTTACAATATCCAAACTGTATAGGAAACATTTAGAAAAATGCTCTCCCTACGAGTGTGATGTGTGTAACAAAAAATTTATGTTAGAGGGTAGATTTTTACGTCATAAATTATCACATAATACTAGTGGCAAGAAAAGTAAAGGCTGCAGAGTACGTAATTTGCCGAATAAATTAACACAAAGCACCGAtgaagaaaaaagtgtaaaagaaGAGGATGTCAGTGTGAACCCCGACGCAGATCCGGACAACACCAcggaaaaaaacagtgaaactGAAATTAAGCTTGGGATTAAATGTTCTAAGTGCCGCAATAAATTTATGCTGAAAAAAGATTATAAAAGACACTGCCCGACTTGCGACAAAATGTTTGCAACAAAGCATCACTTGTGTGCACACAAACAAACACACTTGAACAAGATAAGGGAGAGGCGACACGTGTGTGAGATTTGTGGGAAAAAGTTTGCGGCTTTCGTAGTTTTACGCAGGCATAGAATTACGCACTCTCAAGAgaagaagttcttctgcaagaTCTGTGATAAGGGTTTCAACATCAAAATGTATTTACAGCAGCACATGAAGAGGCATGTGGGTGAAAAACCGTACGTATGTGACACTTGCAATTCGTGTTTTGCCTCGAAAAGTAATTTGGCGGAACATTATCGCAGTCACACCGGAGAAAGACCTTATAAGTGCATGATGTGCGAAAAGAGCTTTGCGCAAAGCAGCACATTAAGGGTGCACGTGCAGTGCACGCACTCAAACGAAAAACCCTTCGCCTGtgaaGTTTGCGGAAAAAGATTCCCTCTGAAAGGCAACCTTCGAGCACATTCCGCTGTGCACATGGAAAAGGTCGAAAAATTTTCTTGCCCTTACTGTGACAAGATTTTTCACAAGAACAGTTATCTGAAGCAACATATTAAGAGACACACAGAAGAGCCAACACATATGTGTACTTTATGTGAGAAAGGTTTTTTTACATCTCATGAATTgaagaaacatatgaggattCACACAGAAGAAACAGATTCAAAGACTATAATTGACACTACTTTATTGACCGAGAATTTTGAAGCAAATATAAATGTGTTGGATGTGGTAAAGAAAGAAAGTGTGTTAAAACCGGAACCCCTGGAAGTTTTATGtgattttgcaagtgtgtaccAAGATTCCTCTGAGGAAACAAATGAGACTGGTGAAGGTGATAAGAGCAGTGAAACTCCAATAAAAGATGGCATtaagtgttcaaattgttctAGTGACTTCGCAGTCTTGAAAGAATACAGAAAACACTTAGCGCAATGCGCACAATATGCATGTGATATGTGCAATAAAAAGTTTATGTTGAAAACTAGGTTTCTCAGCCATATAGCTTCTCATAATGCAGACATGAAGGAGTGTATGTACAGTGAGTCAGACaaggaaaaaagtttaaattgtaAACCTGAAGAAGATAAAGTAACTAGACAGGGTATAAGTCCTAAGCCAGAAGAGGATAAAAGCAATCAGGCAGTAATTAAGGGGGGTGTTAAATGTTCGAATTGCTCTACAGAGTTTACAGTTTGGAAGGAGTACAGGAAACATTTAGAGAAATGTTCGCCTTATGAGTGTGATGTATGCAGCAAAAAATTTATGTTAGAGGGTAGATTTCTACGACATAAACAGTCGCATAAAATAACtggagagaaagagaaaagtgATGATGCCTTGCAAATTAACTGCGGCATTAAGTGTTCTAAGTGCCAAAATAAATTTCTGCTTAAAAAAGATTACATGAGACACATAAAGCAATGTGCTCCCTTCGAATGGCGAAAACCTTTCAAGTGCCCCATGTGTGAAAAAATGTTTGCAACGAAACATCACTTATGCGCGCACAAACAGACGCATTTGAATAAGCAAAGGGAGAGGCGGCACGTGTGCGAACAGCATGTGAAGAAGCATACAGGTGAGAAACCATACGTTTGTGACGTATGCAATTCGTGTTTTGTCTCAAAGAGTCGGTTAGTAGAGCATTACCGCAGTCACACCGGAGAAAGGCCTTATAAATGTAAGATGTGCGACAAAAGCTTTGCGCAAAGTAGCACGCTAAGAGTACACGTGCACTGCACTCACTTAAACGAGAAGCCCTTCGGATGTGAGGTGTGCGGGAAAAGATTTAATCTGAAAGGCAACCTTCGAGCACATTCAGTTTTGCATATGGAAAACGCAGAAAAATTTCCTTGCAGCTATTGCGGGAAAGTTTTCCATATAAACAAGGACTTAAAGCGGCATGTTAAGAGGCACATAGGACAGCCAACTCACATGTGTACCGTTTGCGGTAAAGGTTTCTTTACATCTCACGAATTAAAAAAGCACATGAGAAGCCACACCGGTGAAAAACCTTTCGAGTGTGAAGTCTGCCATCAGAGATACAGTCAGAGTTATAACTTGCACGTGCATATGAAGGTGCATTCGAAGGGTTCATGA
Protein Sequence
MAKVCRLCLKIIGDAYYSIDENAVVRSRNKIMILMPELELNVVAEPVLCSLCYGTLHVAYEFKCSCLANEQRITEYLKNDKRPPVNLCDLLEETDSKNVMSPGLTSENFGINVNALEPVKKENILKPEPLEVLCEVENVYADSFKETNAERNEAPVKGGMKCTKCSSEFIALKDYRKHMPQCTNYECDTCNKKFKLKSRFVKHKSAHRTDAGKDMETAPKDTDREMSTSPEPEQDVNNQPLNKNHVSPEPEQDKSSDSESKVCESIIPKEDISDLSQVSTGSVKCSNCSTEFTISKLYRKHLEKCSPYECDVCNKKFMLEGRFLRHKLSHNTSGKKSKGCRVRNLPNKLTQSTDEEKSVKEEDVSVNPDADPDNTTEKNSETEIKLGIKCSKCRNKFMLKKDYKRHCPTCDKMFATKHHLCAHKQTHLNKIRERRHVCEICGKKFAAFVVLRRHRITHSQEKKFFCKICDKGFNIKMYLQQHMKRHVGEKPYVCDTCNSCFASKSNLAEHYRSHTGERPYKCMMCEKSFAQSSTLRVHVQCTHSNEKPFACEVCGKRFPLKGNLRAHSAVHMEKVEKFSCPYCDKIFHKNSYLKQHIKRHTEEPTHMCTLCEKGFFTSHELKKHMRIHTEETDSKTIIDTTLLTENFEANINVLDVVKKESVLKPEPLEVLCDFASVYQDSSEETNETGEGDKSSETPIKDGIKCSNCSSDFAVLKEYRKHLAQCAQYACDMCNKKFMLKTRFLSHIASHNADMKECMYSESDKEKSLNCKPEEDKVTRQGISPKPEEDKSNQAVIKGGVKCSNCSTEFTVWKEYRKHLEKCSPYECDVCSKKFMLEGRFLRHKQSHKITGEKEKSDDALQINCGIKCSKCQNKFLLKKDYMRHIKQCAPFEWRKPFKCPMCEKMFATKHHLCAHKQTHLNKQRERRHVCEQHVKKHTGEKPYVCDVCNSCFVSKSRLVEHYRSHTGERPYKCKMCDKSFAQSSTLRVHVHCTHLNEKPFGCEVCGKRFNLKGNLRAHSVLHMENAEKFPCSYCGKVFHINKDLKRHVKRHIGQPTHMCTVCGKGFFTSHELKKHMRSHTGEKPFECEVCHQRYSQSYNLHVHMKVHSKGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-