Pinq024440.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Prosopocoilus inquinatus
Gene Symbol
-
Assembly
GCA_036172665.1
Location
CM069876.1:49572133-49580545[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 45 1.8 1.1e+02 4.5 0.2 2 20 42 60 41 63 0.92
2 45 0.00051 0.032 15.6 4.0 1 23 69 91 69 91 0.98
3 45 0.00016 0.01 17.2 2.3 1 23 97 119 97 119 0.98
4 45 0.053 3.3 9.3 4.3 1 23 125 147 125 147 0.96
5 45 0.25 15 7.2 3.9 1 23 153 175 153 175 0.98
6 45 0.5 31 6.2 4.7 1 23 181 203 181 203 0.97
7 45 0.049 3.1 9.4 2.1 1 21 209 229 209 230 0.93
8 45 0.16 10 7.7 2.0 1 23 248 270 248 270 0.97
9 45 8.7e-06 0.00054 21.2 0.4 1 23 290 312 290 312 0.98
10 45 0.0096 0.6 11.6 1.8 1 23 318 340 318 340 0.98
11 45 0.0031 0.19 13.2 1.0 1 23 346 368 346 368 0.98
12 45 0.0083 0.52 11.8 1.9 2 23 375 396 374 396 0.97
13 45 0.023 1.4 10.4 3.8 1 23 402 424 402 424 0.97
14 45 0.011 0.68 11.5 2.2 1 23 430 452 430 452 0.95
15 45 0.19 12 7.5 2.1 1 20 458 477 458 479 0.93
16 45 0.0039 0.24 12.9 2.3 1 23 513 535 513 535 0.97
17 45 3.1 1.9e+02 3.7 4.0 1 23 541 563 541 563 0.97
18 45 0.018 1.1 10.8 0.6 1 23 569 591 569 591 0.97
19 45 0.85 53 5.5 1.9 3 23 599 619 597 619 0.96
20 45 0.26 16 7.1 1.8 1 23 625 647 625 647 0.96
21 45 0.35 22 6.7 4.9 3 23 655 675 653 675 0.95
22 45 0.00038 0.024 16.0 1.4 1 23 681 703 681 703 0.98
23 45 0.0032 0.2 13.1 2.3 1 23 709 731 709 731 0.97
24 45 7.5 4.7e+02 2.5 0.4 1 11 737 747 737 761 0.64
25 45 0.65 40 5.9 0.1 3 23 769 789 768 789 0.92
26 45 0.031 1.9 10.0 0.3 1 23 795 817 795 817 0.98
27 45 0.00027 0.017 16.5 2.6 1 23 823 845 823 845 0.97
28 45 0.0062 0.39 12.2 3.6 1 23 851 873 851 873 0.97
29 45 0.64 40 5.9 1.1 3 20 879 896 879 898 0.96
30 45 0.02 1.2 10.6 1.1 1 23 911 933 911 933 0.98
31 45 0.0026 0.16 13.4 1.1 2 23 940 961 939 961 0.96
32 45 0.0063 0.4 12.2 0.9 2 23 968 989 967 989 0.97
33 45 0.00024 0.015 16.7 0.5 1 23 995 1017 995 1017 0.98
34 45 0.00047 0.03 15.7 4.0 1 23 1023 1045 1023 1045 0.98
35 45 0.00078 0.048 15.1 3.9 1 23 1051 1073 1051 1073 0.97
36 45 0.00073 0.046 15.1 1.7 1 23 1107 1129 1107 1129 0.97
37 45 0.1 6.5 8.4 2.3 1 23 1135 1157 1135 1157 0.96
38 45 0.00083 0.052 15.0 1.5 1 23 1187 1209 1187 1209 0.96
39 45 0.0086 0.54 11.8 4.7 1 23 1215 1237 1215 1237 0.97
40 45 0.14 8.8 7.9 4.6 1 23 1242 1264 1242 1264 0.97
41 45 0.29 18 7.0 1.2 6 23 1272 1289 1271 1289 0.98
42 45 0.16 9.9 7.8 1.4 1 23 1296 1318 1296 1318 0.96
43 45 7.6 4.8e+02 2.5 2.2 1 23 1329 1351 1329 1351 0.92
44 45 0.0026 0.16 13.4 3.6 3 23 1359 1379 1357 1379 0.97
45 45 0.0027 0.17 13.4 1.9 3 23 1387 1407 1385 1407 0.96

Sequence Information

Coding Sequence
ATGTCAGATTTGCTTTGTTTCAGATGTCGCTGGACTTccgaatataaaattattgtggatgAAAAAATTGAAGGGCGCTTAGGCCATCACGCGCCGACAcataccgacgagaagccgcCTATCAAGTGCGTCACGTGCGATTACGAATGTGGAAGCTCCGAAGAACTGAGCGAGCACTTGCCAATCCACGCCGACGAGAAACCATTTCGCTGCGTCGTTTGCGACTACAAATGTCGCAAGTCCACGCTACTGACGCGGCACATgttaacgcacaccggcgaaaaaccCTTCAGctgcgacctctgcgattacaagtgccgtcGGGCCGGGTACTTGAAAGAGCACATGCTAAcccacaccggcgagaagcccttCGCCTGCGACCTCTGCGACTTCAAATGTCGACACGTCAGCAACTTGAAACAACACGGACTgaagcacaccggcgagaagatGTTCAAGTGCGAcatttgcgattacaagtgcggCCTTAAGAGACGTCTGAAGCAGCACGTGTACACGCACACGGGCGAGAAGCGGTTCTGCTGCGATCTGTGCGGTTACAAGTGCCTCGAGAAGCTCGACCTGAGGCGGCACATgctgacgcacaccggcgaaaagccgTTCGCCTGCGATCTGTGCAATTACAGGTGCACGCAAGCCGGATCTTTGAAGCTGCACAGgtGCCGAAGCAGGACGTCTTTGAGGTCGCACGGGTTGAAACACACCGGGGATAGACCGTTTTGCTGCGACGTTTGCGTGTACAGAGCGCGAGACCGCAACGCTCTGAAACGGCACAAGTTGATGCACtcgggcgagaagccGTATCCAGGCGTTTTCGAGTTCAAATTGGAGGCCCCAAGGCCATTCGAATGTCCGACGTGCGGTTCTAAATTCACAACGAAAAGAAACTTGGTAGATCACATGCtgatacacaccgacgagaagccgttcaaaTGTGCCGTCTGCGATTATAAAAGTCGCCTGTCCGGACATCTGAAACTGCACATGGTGAAACACAGCGACGAGAAGCCTTTCAGTTGCGACGCCTGCGATTACAGATGTCGCGTTCCCGGACAACTCAAGCAGCACCTACTGACGCACACCAACGAGGAGCCCCTTCGGTGCGccgtttgcgattacaaatgtcgaCTGGCGTCGAGACTGAGGAAGCACATGCTGATGCACACCGCCGAaaaaccgttcagttgcgacctctgcgattacaagtgccgacGGGTCGCGCATCTGAGAGAGCACAAgctgatacacaccggcgagaaacctttcgcttgcgatctttgcgactTTAAGTGTCGACATGCCGGCAACCTGAAGCAACACGGGTTAATACACACGGGCGAGAAGCCGCATGCCTGTGACGTTTGCGATTTCAGGAGTCGACATCGCAATGCTCTGAAGCGCCACAGATTTCAATGGACATTCAAATCCGAAGCCGCGGACGAAACGGCTACTACTTTCGAAAATGAATGGCGTATAGAAAAGCATGAGCTGACGCACGCCTACGAGAAGCTATACACCTGCGTCgcttgcgattataaatgtcaaaCATCCAGTCAGCTGAAGAAGCACATGGTGATACACCCTAACGAAATGCCCTTTCGTTGCGCGACCTGCAACTTTAAGTGCTTGTACAGGTCGCTTTTGGAACAGCACACgctgacgcacaccggcgagaaaccgttcgcttgcgatctctgcgattacagAAGCGTGAAATCCGGAAATATGAAGCGACACTCGCTGACGCACACCGGAGACAAGCCGCTCGCTTGCGACCTTTGCGAATACAAGTGTCGAGACAGGACGGCTTGGAAGatgcacaagttaaagcacaccgGCGAAAGACCGTTTTGCTGTCGGATTTGCGATTATAGGGGCCAAAGAGCCGTCGATTTGAAACAGCACAacttaacgcacaccgacgagatgCCGCTGGCGTGCGAGTTTTGCAATTACCGATGCCGGCACCTCGCGAGCTTGAAAGTGCACAGATTCAAGCACACGGGCGAGAAGCCTTACGCCTGCGACGTTTGCGGTTATAGATGCCGGGATGCCAGAAATCTGAGCCAGCACAAATTAActcacaccgacgagaagcctttcgcctgcgacctttgcgattttAGGTGCCGGCAGGCTGCGAACTTGAAGCAGCACAAATTgaggcacaccgacgagaagccgttcgttTGCGATGTTTGCGGTTTCAGATATCAGCGGATAACCAAATCTCAAACCGAAGCGCACGCGACGACGCACgccaacgagaagccgttcggatGCGTCGCTTGCGGCTACAAATGTCAAATAGCCGGACAACTAAAAGCGCACATgttgatacacaccggcgagaaaccgttcactTGCGATCTCTGCGTTTACAAAAGCGGACGCGCGGGCGATCTAAAAAAACATAGACTGAtccacaccggcgagaagccattCGCCTGCGgtctctgcgattacaaatgccgcaATTCCAGCAACCTAAGGGAACACAGGTTGAcccacaccgacgagaagcccttcacctgcgatctttgcgattacacgTGTCAAAACAGCAGATATTTGAAGCGGCACGCGTTGTCGCACGCGAAGTCGCTCGGCTGCGAACTCTGCGATTACAGGTGCGGCCGAGTCGATTACTTGAAGCGGCACAGATACCAACAGATTCCCAAATTCAAAACTGCACAAGAAAAGGCGTTCGAGTGCCCCGCCTGCACTtccaaatttaaaatcgaagCACATTTAAAAAGTCACCTGATGACGCACGCCGACGAGAAGCTGCTGAAATGCCTCATCTGCAATCGGAAGCTTCGGCGAGCCGACTTCCTCGCGCGGCACATGTTCAAGCACACCCAAGACGCCCCGCTCAGgtgcgacctctgcgattacaagtCCAGATCGCTTCAAAGTCTGAAACGGCACGCcctaacgcacaccgacgagaagccgttctcCTGCGACCTCTGCGACTACAAGAGCAGGCTGCCCGAAAACCTCAAGCGCCACATTTTAACGCACAGCGAGGAGACACCGTTCTCCTGCGAGCTCTGCGGCGACAAGTTCAAGCGACTTCATTATCTAAAGCGGCACATGCTGAAACACACCGCCGAAAAGCAGTTCGCGTGTAGTCTCTGCGATCACAGATTCCACGGCGCTTACAGTTTGAAGCGACACATGATGACGCACAGCGGCGCGAAGCCCTTCCTCTGCACGGTCTGCAGCTTCAAGTGCCTGCACAGGCAAACCATGGAACGCCACGTgctaatacacaccggcgagaaaccgttcagttgcgacctttgcgattacaaatgccgccAGGCCGGGAACTTGAAACTGCACAGgctgatacacaccggcgagaagcctttcgcttgcgacctctgcgattataagtgcagAGAGAAGGTTTCCTTGAGACTGCATAAGTTAAACCACGCCGGCGATAAGCCGGTTTGCGACGTGAAATGCCTGGACGAGAAGACGCTGAAACGGCACGTGTtgatacacaccgacgagaaactgTTCGCTTGTGagctctgcgattacaaatgtagGCGAGCCGCGTACCTGAAGCAACACATGTCGGGGCATGCGGGCGAGAAGCCTTTCGCTTGCGATCACTGCGAGTACAAGTGTCGAGATAGGGGATCATTGAAACTGCATCAGTTGAAACATGCTGATAAGCCGTTTTGTTGTGAGATTTGCAATGTGAGATTCCTGCATAGGAAAACCTTAGCGCGGCATATGGTGAAGCACAGCGGCGAAAAACCACTCgcttgcgattacaaatgccgacaggCCGAGCGTTTGAAGCGGCACAGgttaacgcacaccggcgagaagcctcTTTTCGCTTGCGCtctctgcgattacaagtgtcgAGGCAGGGAATATCTGAAACTGCACGCGTTAAAGCACGCCGGCGAACAAGCTGTTGATGATAAGCCGTTTGCTTGCAAGGTTTGCGACGTGAAATTCCTGTGCAAGAAGACCTTGAAGCAGCACGTgttaatacacaccgacgagaaaccgtacggttgtgacctttgcgattacagaTGCAGGCGACCCGCGCACCTGAGAAGTCACAGGTTGACGCACACGGGCGAGAAGCCCATCGCTTGCGatgtttgcgattacaagtgtcgAAACACCGGAAACTTGAGGAAACACAAGTTGTCGCACCAGCCACTTGATTCTTCTAATATTTGA
Protein Sequence
MSDLLCFRCRWTSEYKIIVDEKIEGRLGHHAPTHTDEKPPIKCVTCDYECGSSEELSEHLPIHADEKPFRCVVCDYKCRKSTLLTRHMLTHTGEKPFSCDLCDYKCRRAGYLKEHMLTHTGEKPFACDLCDFKCRHVSNLKQHGLKHTGEKMFKCDICDYKCGLKRRLKQHVYTHTGEKRFCCDLCGYKCLEKLDLRRHMLTHTGEKPFACDLCNYRCTQAGSLKLHRCRSRTSLRSHGLKHTGDRPFCCDVCVYRARDRNALKRHKLMHSGEKPYPGVFEFKLEAPRPFECPTCGSKFTTKRNLVDHMLIHTDEKPFKCAVCDYKSRLSGHLKLHMVKHSDEKPFSCDACDYRCRVPGQLKQHLLTHTNEEPLRCAVCDYKCRLASRLRKHMLMHTAEKPFSCDLCDYKCRRVAHLREHKLIHTGEKPFACDLCDFKCRHAGNLKQHGLIHTGEKPHACDVCDFRSRHRNALKRHRFQWTFKSEAADETATTFENEWRIEKHELTHAYEKLYTCVACDYKCQTSSQLKKHMVIHPNEMPFRCATCNFKCLYRSLLEQHTLTHTGEKPFACDLCDYRSVKSGNMKRHSLTHTGDKPLACDLCEYKCRDRTAWKMHKLKHTGERPFCCRICDYRGQRAVDLKQHNLTHTDEMPLACEFCNYRCRHLASLKVHRFKHTGEKPYACDVCGYRCRDARNLSQHKLTHTDEKPFACDLCDFRCRQAANLKQHKLRHTDEKPFVCDVCGFRYQRITKSQTEAHATTHANEKPFGCVACGYKCQIAGQLKAHMLIHTGEKPFTCDLCVYKSGRAGDLKKHRLIHTGEKPFACGLCDYKCRNSSNLREHRLTHTDEKPFTCDLCDYTCQNSRYLKRHALSHAKSLGCELCDYRCGRVDYLKRHRYQQIPKFKTAQEKAFECPACTSKFKIEAHLKSHLMTHADEKLLKCLICNRKLRRADFLARHMFKHTQDAPLRCDLCDYKSRSLQSLKRHALTHTDEKPFSCDLCDYKSRLPENLKRHILTHSEETPFSCELCGDKFKRLHYLKRHMLKHTAEKQFACSLCDHRFHGAYSLKRHMMTHSGAKPFLCTVCSFKCLHRQTMERHVLIHTGEKPFSCDLCDYKCRQAGNLKLHRLIHTGEKPFACDLCDYKCREKVSLRLHKLNHAGDKPVCDVKCLDEKTLKRHVLIHTDEKLFACELCDYKCRRAAYLKQHMSGHAGEKPFACDHCEYKCRDRGSLKLHQLKHADKPFCCEICNVRFLHRKTLARHMVKHSGEKPLACDYKCRQAERLKRHRLTHTGEKPLFACALCDYKCRGREYLKLHALKHAGEQAVDDKPFACKVCDVKFLCKKTLKQHVLIHTDEKPYGCDLCDYRCRRPAHLRSHRLTHTGEKPIACDVCDYKCRNTGNLRKHKLSHQPLDSSNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-