Pinq024460.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Prosopocoilus inquinatus
Gene Symbol
-
Assembly
GCA_036172665.1
Location
CM069876.1:49720167-49729046[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 48 0.1 6.5 8.4 7.4 1 23 18 40 18 40 0.97
2 48 0.00093 0.058 14.8 5.0 1 23 46 68 46 68 0.98
3 48 0.015 0.97 11.0 2.9 1 23 74 96 74 96 0.96
4 48 0.036 2.2 9.8 3.3 3 23 104 124 102 124 0.96
5 48 0.017 1.1 10.8 1.3 1 23 130 152 130 152 0.96
6 48 0.017 1 10.9 2.7 1 23 158 180 158 180 0.98
7 48 0.0064 0.4 12.2 2.4 1 23 186 208 186 208 0.98
8 48 0.094 5.9 8.5 4.5 1 23 247 269 247 269 0.97
9 48 0.0061 0.38 12.2 0.5 3 23 277 297 275 297 0.96
10 48 0.03 1.9 10.1 3.5 1 23 303 325 303 325 0.97
11 48 0.0028 0.18 13.3 0.5 3 23 333 353 331 353 0.96
12 48 0.025 1.5 10.3 2.2 2 23 360 381 359 381 0.96
13 48 0.17 10 7.7 7.5 1 23 387 409 387 409 0.96
14 48 0.0074 0.47 12.0 2.8 1 23 415 437 415 437 0.98
15 48 0.93 58 5.4 4.6 2 23 444 465 443 465 0.96
16 48 0.5 31 6.2 1.4 1 23 471 493 471 493 0.96
17 48 0.019 1.2 10.7 1.3 1 23 500 522 500 522 0.97
18 48 0.0026 0.16 13.4 3.0 1 23 528 550 528 550 0.98
19 48 3.4e-05 0.0021 19.3 0.8 2 23 557 578 556 578 0.96
20 48 0.0021 0.13 13.7 2.9 1 23 584 606 584 606 0.98
21 48 0.3 19 6.9 5.0 1 23 612 634 612 634 0.95
22 48 0.091 5.7 8.5 3.6 1 23 659 681 659 681 0.97
23 48 0.075 4.7 8.8 2.2 1 23 687 709 687 709 0.96
24 48 0.22 14 7.3 6.9 3 23 717 737 715 737 0.98
25 48 0.063 3.9 9.0 3.6 2 23 744 765 743 765 0.97
26 48 0.23 15 7.3 0.8 2 23 809 830 808 830 0.96
27 48 0.042 2.6 9.6 1.8 1 23 836 858 836 858 0.96
28 48 0.19 12 7.5 0.4 1 23 864 886 864 886 0.96
29 48 0.53 33 6.1 0.5 1 23 891 913 891 913 0.97
30 48 0.007 0.44 12.1 3.6 1 23 935 957 935 957 0.97
31 48 0.52 33 6.2 2.2 1 23 962 984 962 984 0.97
32 48 0.00046 0.029 15.8 0.6 1 23 990 1012 990 1012 0.98
33 48 0.032 2 10.0 4.1 1 23 1018 1040 1018 1040 0.96
34 48 0.022 1.4 10.5 0.2 1 23 1086 1108 1086 1108 0.98
35 48 0.035 2.2 9.9 3.1 1 23 1114 1136 1114 1136 0.92
36 48 3.1e-06 0.00019 22.6 3.3 1 23 1142 1164 1142 1164 0.99
37 48 1.2 73 5.1 0.3 3 23 1172 1192 1170 1192 0.95
38 48 0.056 3.5 9.2 2.6 1 23 1197 1219 1197 1219 0.97
39 48 0.017 1.1 10.8 0.6 1 23 1225 1247 1225 1247 0.98
40 48 0.012 0.75 11.3 9.1 1 23 1253 1275 1253 1275 0.98
41 48 0.041 2.5 9.6 3.2 1 23 1281 1303 1281 1303 0.98
42 48 0.022 1.4 10.5 3.2 1 23 1309 1331 1309 1331 0.97
43 48 0.12 7.4 8.2 1.0 1 23 1337 1359 1337 1359 0.98
44 48 1.5 93 4.7 0.6 1 23 1365 1387 1365 1387 0.96
45 48 0.00015 0.0091 17.4 0.6 1 23 1424 1446 1424 1446 0.98
46 48 0.0009 0.056 14.9 6.3 1 23 1452 1474 1452 1474 0.97
47 48 0.0016 0.1 14.0 3.6 1 23 1480 1502 1480 1502 0.98
48 48 0.033 2 10.0 4.8 1 23 1508 1530 1508 1530 0.96

Sequence Information

Coding Sequence
aTGCTCAGCAACTTGACCCAGCACAAGTtgaaacacaccggcgagaagagGTTCTGCTGCGATTTCTGCGGTTATACGTGTCGATACGCCGTCACTTTCAACCGGCACAGGCAACGGCATACCGGCGTGAAGCCGTTCAAGTGCCACGTCTGCGATTACAGCTGCAGGCAGGTCGCGAGCCTGAGACAGCACATGTTCatgcacaccgacgagaaaccgttcacctgcgatctctgcgattacgCGTGCCGGAACACCATGACCTTAAAGCGACACAAGCTGtggcacaccggcgagaagccgttcggctgcgacctctgcgattataaatgccgagacCTCGCAAACTTGAGGAAGCACAAGTTCAAGCACTCCATcgaaaagccgttcagctgtgacGTTTGCGATTTCAAGAGTCGACAGGTCGACAGCTTGAGGCGACACAAGTTacaacacaccggcgagaaaccctACGCTTGTGATCTCTGCGAGTATAAATGCCGCCAGCTCAACGGTTTGAAGCGACACAAgctgacgcacaccggcgagcaACCGTACAGTTGCGATCAGTGCGATTATAAGGGCCGACGGCTCAGTTACTTGAAACAGCACAAGTTGAAACATTCGCGAGAAGCCGGTACGGTGCGTCGTCAGCGGAACACCAACGCCGGAAGCGCACACGAAGAAACAACCGAACGCCGAATAcgtgattctaaatttaaaaccgacgagaagccgttcacttGTGACGCGTGCGATTTCAAATGCAAACGCCGCTACTACCTGAAAGAGCACAAATTggtacacaccgacgagaagccgttcggctgTGACGCGTGCGATCTTAAATTCAAGAGCCTCGCGAATTTGAAAGTGCACAAATCAACGcacgccgacgagaagccgttcagttgcgacgCGTGCGACTTTAAATGCAGACGCTCCTACGACCTGCAATCCCACAAGTTAatgcacaccgacgagaagccgttcggctgTGACGCGTGCGATCTTAAATTCAAACGCCTCGCGAATCTGAGAGTGCACAAACTAACACACACTGACGAGAAGCCGCTTCGCTGTGAcatttgcgattttaaatgccgatACCCCAGAAGTTTGAGGCTGCACAAgttgatacacaccggcgagaagccgcacagttgtgacctctgcgattacacATGCCGACACCTCAAGAGTTTGAAAACtcacaaattaatacacaccggcgagatgCCGTACAACTGCgagctttgcgattacaagtgccggcGGGTTGGGGAATTGAAAACGCACAAGTTAActcacaccgacgagaaaccgttgaGTTGCGACGCGTGCGAATTCAAATGCAAGCACCTCGCAAGTTTGAGGCGgcacaagttaacgcacaccggtgagaagccgttcagttgtgacgcttgcgattataaatgccgagatCTCAGACGCTTGAAAGAGCACGCgctgatacacaccggcgagaagccgaggttcagttgtgatctttgcgattacaagacCCGGGATCTCGCACACTTGAAAGGgcacaaattaatacacaccgacgagaagccgttcagctgcgaTGCGTGCGATTTCAGGTGCAAGCGCCCCGTAAATCTGAGAAGGCACAAGCTAACGCACACGGACGAGAAGCCGTTGAGCTGCGgcgtttgcgattataagtgccgggATCCTTCGAATTTGAGACAGCACATGTTAATACACGCCGAGGAGAAGCTGTTCagctgtgacctttgcgatttcaAAAGTCGGCACGCCGGATATTTGAAGAAGCATATGTTGAGgcacaccggcgaaaagccgTACAGTTGCGAGCTTTGCGACTTTAAGTGTAGTTACCTTGGGAAGTTGAAACGACACAAATCATTTCACgccgatgagaagccgttcagttgtgacacgcaTCAGCGGATCCCTAAAGCCGAAAGCGTGCAAAAAGAAACGTTCGAATGTCGAACAtgcgattctaaatttaaatcgcGCCTGTGCTTGCGCAGACATGCCCTggtacacaccgacgagaagcctttCAGTTGTGACGCGTGCGCGTTCAAATTCAAGCGTCGCTTCGACTTGAAACAGCACAAATCAGTGCACaacgacgagaagccgttcggctgTGACACGTGCGATTTCAAGTGCAAACGCCGGACGCATCTGAGAGAGCACAAATTGACGCATACCGACGAGAAACCCCTCCGCTGTGGTAtatgcgattttaaatgccggTATCACAGAGGTTTGAAGCTGCACATGTTAATACACACGGGCGAGAAGCCGTGTCAACGCGTCCCGATGGCTCCAGCTCCAACCGAGAACAAGAAGACATCCGAACACGATTTTAAATCCAAATCTCGCGCAAATCTCTCGGCAcgtaccggcgagaagccgctgagctgcgacctctgcgattataaatgtcaacCAGGCGAAAATTTGAAGACACACCAATTAATCCAcgccggcgagaaaccgttcttTTGTGGTATTTGCGGTTATAGATGCAGACTCGTCCGGAGTTTGAAGCTGCACATGTTGCTGCACACCGACGAGCGGCCGTTCAGCTGTGACGTGTGCGGTTTTAAGTCCGCACGCCTCGCGCGTTTGAAATACCACAGGTTAGCGCACGATCGGAAGCCGTTCACTTGCGGcgtttgcgattataaaacCCCATGGCTCAGAAATTTGAAGGTGCACAAGTTGAAACATAGACAGAAACAGCGCAATTACATGAGTAAACATAAATCAACGCGCACCGGCGAGAAGAAGCCGTTCGCTTGTGACAAGTGCGACGTTAAATGTAAAACCCTCGAATATTTGAAGAAACACAAACTGACGCACACCGAGAAACCGTTCTTTTGTGGTATTTGCGATTTTAAGTGCCGATGGCCGAAGAGCTTGAGCATGCACATGTTAAGACACACCGACGacaagccgttcagttgcgatctttgcgattataaaggcCGACGGGCCGAATACTTAAGATCTCATATgttgacgcacaccggcgagaagccgttcagctgcgattgttgcgattataaatgccgaagcCTCGGTGCTCTGAAACGCCACATGATGGTGCACACGGGCGAAAAGCCATGTCCATGGATGTCCAAAGCCAACACCGTGGAACACATAACTGTGGAATGTCGCATTTGCGACGCCAAATTCAAAGCACACGCCGAAGGCCACGCGCcgaaacacaccggcgagaagcaaTTCAAATGCCTCGAGTGCGGTTTCGAAAGCCGGTGGGCCGCGTCTCTGCAACGCCACATGCTGAGACACACCGGCGAAAAGTCCTTCGACTGCACCGTTTGCGGTTGTAAATGCGAACGGGCGTCGGTTTTGAGAAGGCACATGTGGACGCACGCCGATAAAAAACCGTTCAAGTGCGATCTCTGCGAGAACACCTTTCGACGCCCCTCGCACTTACGGCAGCACATGATGACGCACACCAGCGAGAAGCCTCTGGCTTGCGATGCTTGCGATTATAGATGCGGAGATCCCGCACGCTTGAGACAACACAAATTAATACATTCCGAGAAGCAGTTTAAATGCACGATCTGCAGCTACCAGTGCCGACTTGAGAGCAGCTTGAAGCTGCACTTAAGCGCGCACACGGGAGAGAAGCGGTACTCTTGTgacgtttgcgattataaaagcGTTTACGCAAACTCGCTTAAAATACACAAGTTGAAGCACACCGGAGAGAAGCctttttgttgtcatttttgCGGCTTCAGGTGCCGACAGAGAGGTGAACTGAAGCGGCACCTGCTGACGCACACCGAGGAGAAGTCGTTCAAGTGCGACGTTTGCGACTTCAAGTGCCTGCTCAAAGACGGCCTGAAGCGACATCTGCGCACGCACTCGGACGAGAAACCGTTTGCCTGCGACGtctgcgattttaaatgtcgaGTTAAGAGTTCCCTGAAGCTGCACAAGCTGAAGCACACCGGCGAAAGGCCGTATCACTGCgctctttgcgattacaagggCGCGGCGAGCAGATCGCTGAAGCAGCACATGCTGAGACACACCGGCGAGAGACCTTAcgcttgcgatctttgcgactACACGAGCCAACTTGCGATAAGATTAAAGCGACACAAGCTCAAACACGCCGCGAACTTTGAAGTCGTGGATATAGAAACACCCCCTGTATATGATTCTAGTTCGGAAACTGAGGCACACGCGCCGACACCTGCCGAAGTTGAACTTGAAAAGAGGTTCAAATGTGCCGTTTGCGACTACCGGTGCGTAGTGGCCGGAAACCTAAAGAAGCACATGTTGATACACACGGACGAGAAGCCCTTTCGTTGCACCGTCTGCGACTACAAGTGTCGACAGTCTTCGCACCTGAGGAGGCACTCCCtcatacacaccgacgagaaaccttTCCGCTGCGCCgattgcgattacaagtgcggGCGAGCCGAGCACCTGAAGAAGCACAGattgatacacaccggcgagaagcccttCGCTTGCGACGTTTGCAGTTATAAGTGCCGACATACCGGGAACTTGAAGAAACACAAATTAATTCACCGTTGA
Protein Sequence
MLSNLTQHKLKHTGEKRFCCDFCGYTCRYAVTFNRHRQRHTGVKPFKCHVCDYSCRQVASLRQHMFMHTDEKPFTCDLCDYACRNTMTLKRHKLWHTGEKPFGCDLCDYKCRDLANLRKHKFKHSIEKPFSCDVCDFKSRQVDSLRRHKLQHTGEKPYACDLCEYKCRQLNGLKRHKLTHTGEQPYSCDQCDYKGRRLSYLKQHKLKHSREAGTVRRQRNTNAGSAHEETTERRIRDSKFKTDEKPFTCDACDFKCKRRYYLKEHKLVHTDEKPFGCDACDLKFKSLANLKVHKSTHADEKPFSCDACDFKCRRSYDLQSHKLMHTDEKPFGCDACDLKFKRLANLRVHKLTHTDEKPLRCDICDFKCRYPRSLRLHKLIHTGEKPHSCDLCDYTCRHLKSLKTHKLIHTGEMPYNCELCDYKCRRVGELKTHKLTHTDEKPLSCDACEFKCKHLASLRRHKLTHTGEKPFSCDACDYKCRDLRRLKEHALIHTGEKPRFSCDLCDYKTRDLAHLKGHKLIHTDEKPFSCDACDFRCKRPVNLRRHKLTHTDEKPLSCGVCDYKCRDPSNLRQHMLIHAEEKLFSCDLCDFKSRHAGYLKKHMLRHTGEKPYSCELCDFKCSYLGKLKRHKSFHADEKPFSCDTHQRIPKAESVQKETFECRTCDSKFKSRLCLRRHALVHTDEKPFSCDACAFKFKRRFDLKQHKSVHNDEKPFGCDTCDFKCKRRTHLREHKLTHTDEKPLRCGICDFKCRYHRGLKLHMLIHTGEKPCQRVPMAPAPTENKKTSEHDFKSKSRANLSARTGEKPLSCDLCDYKCQPGENLKTHQLIHAGEKPFFCGICGYRCRLVRSLKLHMLLHTDERPFSCDVCGFKSARLARLKYHRLAHDRKPFTCGVCDYKTPWLRNLKVHKLKHRQKQRNYMSKHKSTRTGEKKPFACDKCDVKCKTLEYLKKHKLTHTEKPFFCGICDFKCRWPKSLSMHMLRHTDDKPFSCDLCDYKGRRAEYLRSHMLTHTGEKPFSCDCCDYKCRSLGALKRHMMVHTGEKPCPWMSKANTVEHITVECRICDAKFKAHAEGHAPKHTGEKQFKCLECGFESRWAASLQRHMLRHTGEKSFDCTVCGCKCERASVLRRHMWTHADKKPFKCDLCENTFRRPSHLRQHMMTHTSEKPLACDACDYRCGDPARLRQHKLIHSEKQFKCTICSYQCRLESSLKLHLSAHTGEKRYSCDVCDYKSVYANSLKIHKLKHTGEKPFCCHFCGFRCRQRGELKRHLLTHTEEKSFKCDVCDFKCLLKDGLKRHLRTHSDEKPFACDVCDFKCRVKSSLKLHKLKHTGERPYHCALCDYKGAASRSLKQHMLRHTGERPYACDLCDYTSQLAIRLKRHKLKHAANFEVVDIETPPVYDSSSETEAHAPTPAEVELEKRFKCAVCDYRCVVAGNLKKHMLIHTDEKPFRCTVCDYKCRQSSHLRRHSLIHTDEKPFRCADCDYKCGRAEHLKKHRLIHTGEKPFACDVCSYKCRHTGNLKKHKLIHR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-