Pinq024245.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Prosopocoilus inquinatus
Gene Symbol
-
Assembly
GCA_036172665.1
Location
CM069876.1:47221053-47231565[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 31 0.021 1.3 10.6 0.5 2 23 58 79 57 79 0.96
2 31 0.33 21 6.8 2.5 1 23 86 108 86 108 0.97
3 31 0.0066 0.41 12.1 0.6 1 23 114 136 114 136 0.97
4 31 0.68 42 5.8 0.9 1 23 142 164 142 164 0.97
5 31 0.0011 0.07 14.6 1.1 3 23 172 192 172 192 0.98
6 31 0.0011 0.066 14.6 3.6 1 23 198 220 198 220 0.99
7 31 0.019 1.2 10.7 0.2 1 23 300 322 300 322 0.97
8 31 0.0042 0.26 12.7 0.7 1 23 357 379 357 379 0.97
9 31 9.9e-05 0.0062 17.9 1.0 1 23 385 407 385 407 0.98
10 31 0.00048 0.03 15.7 1.9 3 23 415 435 415 435 0.99
11 31 0.013 0.79 11.2 4.8 1 23 441 463 441 463 0.99
12 31 0.061 3.8 9.1 3.0 2 23 546 567 545 567 0.97
13 31 0.0067 0.42 12.1 1.5 1 23 573 595 573 595 0.95
14 31 0.018 1.1 10.7 9.1 1 23 601 623 601 623 0.97
15 31 0.042 2.6 9.6 0.3 1 23 629 651 629 651 0.97
16 31 0.011 0.71 11.4 2.9 3 23 659 679 657 679 0.98
17 31 2.7e-05 0.0017 19.6 1.5 1 23 685 707 685 707 0.98
18 31 0.00037 0.023 16.1 2.3 2 23 714 735 713 735 0.97
19 31 0.0034 0.21 13.0 5.6 1 23 741 763 741 763 0.99
20 31 0.00046 0.029 15.8 3.2 1 23 769 791 769 791 0.99
21 31 0.00026 0.016 16.5 5.5 1 23 797 819 797 819 0.99
22 31 0.00055 0.034 15.5 1.4 2 23 880 901 879 901 0.97
23 31 0.0033 0.21 13.1 5.4 1 23 907 929 907 929 0.97
24 31 0.002 0.13 13.7 10.8 1 23 935 957 935 957 0.98
25 31 0.01 0.65 11.5 3.0 1 23 963 985 963 985 0.98
26 31 0.0029 0.18 13.3 1.2 1 23 991 1013 991 1013 0.98
27 31 4e-05 0.0025 19.1 0.3 1 23 1019 1041 1019 1041 0.98
28 31 1.7e-05 0.0011 20.3 2.7 2 23 1048 1069 1047 1069 0.97
29 31 0.0048 0.3 12.6 6.0 1 23 1075 1097 1075 1097 0.98
30 31 0.00058 0.036 15.5 4.2 1 23 1103 1125 1103 1125 0.99
31 31 0.00026 0.016 16.5 5.5 1 23 1131 1153 1131 1153 0.99

Sequence Information

Coding Sequence
ATGGGACCTGAACAAAACAAGCGCGGCTCTCTTTCTCATTTTGATTGTGAACAGAAACTCGATTGCGCATGGTTAAGTGATGACGTGAAGCTGCTCGAATACGATCCTTGCGATTACAAATTCCAACCAATCGCAAGCATGGAGGCCCAACCCAAAAAGAAAAGGCCTCTCAGCTGTCAGGTTTGCGAACACGAAGCATCGAACGGCGAAGATTTAAAAAGGCACatgttaacacacaccgacgaaatGCGCCGCTTCGTCTGCGACCGTTGCGCGTACAAGTGCAACGCGGACTCGGTTTTGAAGAAGCACATGCGcaagcacaccggcgagaaaccgttcgcttGCGATCTGTGCGCTAAGAAATTTAACATCCTCGGAAACATGAAAAGGCACAGgctgacgcacaccggcgagaaaaaGTTCGTTTGCGACGCGTGCGGTTACAAGAGTTATTGTTCGGGGAACCTGAAGCTCCATTTGGCGACGCACAGAACCGAAAAGGCGATTGGCTGTGCcgtttgcgattttaaatgcgcCAGACCTGCCTACCTGAAGAAGCACATgctgacgcacaccggcgagaaaaaCTACAAGTGCCATCTCTGCGCTTACGAATGCAATCGATCCGGCAATTTACGGGCGCACTTGTccacgcacaccgacgagaggCCTTTTAAGTGCGGGCGTTGCAAATACACGAGCAAGACGGCCCGATGTTCTGGAATTTCTGCGTCTGCTGGAACTAAACCGAGGAAGCAAGACTCTCCTTTTGACGAAGATAAACCCGATTACGTATGGTTAAATGATGACGTCCAGTTAATGGAAGATGATCCTTTCCATTACAAATTCCAACCAATCGGAAGCAAGGAGGCccatcacaaaaataaaaagcctTTCAACTGTCAGGTTTGCAATTACGAAGCAGTGAAAGGCGAAGATTTAAAAAAGCACATGTTAACACACGCCGACGAGATGCGCCGCTTCGTCTGCGACCGTTGCGCCTACAAGTGCCACGCGGTCTCGATTTTAAAGCTGCACATGCGgaagcacaccggcgagaaaccgttcgcttGCGACCTGTGCGCCAAGAAATTCAACCTGCTCGCGAACATGAAAAGGCACAGgctgacgcacaccggcgagaaaaaGTTCGTTTGCGACGTGTGCGGTCACAAGAGCCGGCGCTCGTCGGACCTGAAGCTCCACTTGGCGACGCACAAAAGCGAAAAGCCGATCGGCTGTGCCATTTGCGATTTTAAGTGCGCCAGAGCTTCGTACCTGAAGAAGCACATgctgacgcacaccggcgagaaaaaCTACAAGTGCCATCTTTGCGCTTACGAATGCAGTCAATTCGGAAATTTAAGGTCGCACTTGTccacgcacaccgacgagaggCCTTTTAAGTGCGCGCGTTGCGAATACACGAGCAAGACGGCCCGGTGCCCTGGAAATCTCGAATCCACAATTTCGAAGATAGAAACACTGGAACACGTCGATTTTGAACCTCTTGGCGGCAAACCGAATGACATACTATTAGATGAAGGGATGAAACAATTGGTTTGGGATAACACGAGCCAACCAATCGGAAGCACAGAGCATTTGAAAATCGTTTCCAACGAGGAACTCATCACTTGTAAGATTTGTGATCACAAATTCCTGTTACGCAGATATCTGTACAGACACATGTTGACCCATGCCGATGTGAAGTCGTTCGTCTGCGTACCTTGCGGTTACAAATGCAGAAACATGTGGACTTTGAAAGAGCACATGCGAACCCATACCGACGAGACGCCTCACTGCTGTAAAATCTGCGATTACAAAACTCGACATTCCGCCGGCTTGAAACATCACATGTTAACGCATACCGACGGCAAGCGGTTTATTTGCGATCGTTGCGGTGATAAATTCTACGTGGAAGCGGTCTTGAGGCGGCACATGCTGAAGCACACcagcgagaaaccgttcggttgcgaCCTGTGCGCCAAAAAATTCAACCATCTCGACAGCATGAAAAGGCACAGgctgacgcacaccggcgagaaaaaATTCGTCTGCGACGTGTGTGGGCATAAGACTAACCGTTCGTCGAATCTGAAGCTCCATATGGTAACGCATCAAGAGGAGAAGCCGATCGAGTGCACCatctgcgattttaaatgcgCCAGGCTTACGTACCTTAAGAAGCACATgctgacgcacaccggcgagaaacacTACAAGTGCCACCTTTGCAGTTACGAGTGCAGTCAATTCGGGAATTTAAAGTCGCACttgttaacgcacaccgacgagaaatcGTTTAAGTGCGATCGCTGTGAATACGCGTGCAAAACGGCCAGATATTTGAAGCTGCACATGCGGGTGCATTccgatgagaagccgttcaaaTGTAAACATTGCAAATACGCGTCTAAGTTTCAAGGTAATTTACAGAAACATATGACGACGCACGAAAAAATTGCTCTTGCatgcCCTGGAAATCCTCCTGATTCTACAATTACGAAGATAAAAACGCCGGAACCCGATGACGTACTGTTAGGTGAAGAGACGAAGCAGTTCGTTCGGGATGACACGAGCCAACCAATCAAAAGCACCGAGCACAGGAAGACCAGTTCCAAGGAAAAGCCCGTCACCTGTGAGATTTGCGATTATAGATTCCCGTGCCGCGCAAGCCTTAAAAGACACATGCTGACCCACACCGACGAAAAGCCGTTCGCTTGCGAACACTGCAGTTACAAATGCAGAAACCTCTGGAACTTGAAACAGCACGTGCGAAGACACACCGACGAGATGCCTTACTGCTGCAGCATTTGCGGTCACAAGTGCCGACAGTCCTCAAGCTTGAAACACCACATGTCAACGCACACCGACGACAAGAAGTTCGTTTGCGATCGTTGCGGTTACAAGTGCTACTTAGAATCGGTCTTGAAGCGCCACATGCAGAAGCACACCAGCGAGAAACAGTTCAGTTGCGACCTGTGCGCCAAAAAGTTTAACCTTCTCGGCAACATGAAAAGGCACAGGCTGACGCACGCCGGCGAGAAGAGGTTCGTTTGCGACGTGTGCGGGTACAAGACTAACCGTTCGTCGGATCTGAAGCTCCATTTGGCGACGCACAAAGGCGAGAAACCGATCAAGTGTATGATCTGCGATTTTAAGTGCGCCAGGCCTTCGTACCTGAAGAGGCACATGCGGAcccacaccggcgagaaacgcCACAAGTGCCATCTTTGCGGTTACGAATGCAGCCAATTCGGAAATTTAAGCTCGCACTTGTTGACGCActccgacgagaagccgttcaagtGCGAACGTTGCAAATACGCGTGCAAAACGGCAAGATATTTGAAACTGCACATGCGAGTGCATTCCGATGAGAAGCCGTTTAAATGTAAACATTGCAAATATGCGTCCAAGTTTCAAGGTAATTTACAGAAACATATGACGACGCACGGAAAAACTGCTCTTGTGTCAAAGCGTGCGCCGTCCTATTCAGATGAGAATTCTGCCTAA
Protein Sequence
MGPEQNKRGSLSHFDCEQKLDCAWLSDDVKLLEYDPCDYKFQPIASMEAQPKKKRPLSCQVCEHEASNGEDLKRHMLTHTDEMRRFVCDRCAYKCNADSVLKKHMRKHTGEKPFACDLCAKKFNILGNMKRHRLTHTGEKKFVCDACGYKSYCSGNLKLHLATHRTEKAIGCAVCDFKCARPAYLKKHMLTHTGEKNYKCHLCAYECNRSGNLRAHLSTHTDERPFKCGRCKYTSKTARCSGISASAGTKPRKQDSPFDEDKPDYVWLNDDVQLMEDDPFHYKFQPIGSKEAHHKNKKPFNCQVCNYEAVKGEDLKKHMLTHADEMRRFVCDRCAYKCHAVSILKLHMRKHTGEKPFACDLCAKKFNLLANMKRHRLTHTGEKKFVCDVCGHKSRRSSDLKLHLATHKSEKPIGCAICDFKCARASYLKKHMLTHTGEKNYKCHLCAYECSQFGNLRSHLSTHTDERPFKCARCEYTSKTARCPGNLESTISKIETLEHVDFEPLGGKPNDILLDEGMKQLVWDNTSQPIGSTEHLKIVSNEELITCKICDHKFLLRRYLYRHMLTHADVKSFVCVPCGYKCRNMWTLKEHMRTHTDETPHCCKICDYKTRHSAGLKHHMLTHTDGKRFICDRCGDKFYVEAVLRRHMLKHTSEKPFGCDLCAKKFNHLDSMKRHRLTHTGEKKFVCDVCGHKTNRSSNLKLHMVTHQEEKPIECTICDFKCARLTYLKKHMLTHTGEKHYKCHLCSYECSQFGNLKSHLLTHTDEKSFKCDRCEYACKTARYLKLHMRVHSDEKPFKCKHCKYASKFQGNLQKHMTTHEKIALACPGNPPDSTITKIKTPEPDDVLLGEETKQFVRDDTSQPIKSTEHRKTSSKEKPVTCEICDYRFPCRASLKRHMLTHTDEKPFACEHCSYKCRNLWNLKQHVRRHTDEMPYCCSICGHKCRQSSSLKHHMSTHTDDKKFVCDRCGYKCYLESVLKRHMQKHTSEKQFSCDLCAKKFNLLGNMKRHRLTHAGEKRFVCDVCGYKTNRSSDLKLHLATHKGEKPIKCMICDFKCARPSYLKRHMRTHTGEKRHKCHLCGYECSQFGNLSSHLLTHSDEKPFKCERCKYACKTARYLKLHMRVHSDEKPFKCKHCKYASKFQGNLQKHMTTHGKTALVSKRAPSYSDENSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-