Basic Information

Insect: Prosopocoilus inquinatus
Gene Symbol: -
Assembly: GCA_036172665.1
Location: CM069876.1:47250786-47258759[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.04 2.5 9.7 2.3 6 23 2 19 1 19 0.96

2 26 0.01 0.64 11.5 3.1 1 23 25 47 25 47 0.98

3 26 0.00028 0.018 16.4 0.3 1 23 53 75 53 75 0.97

4 26 0.0029 0.18 13.2 2.5 1 23 81 103 81 103 0.98

5 26 0.00023 0.014 16.7 1.8 2 23 110 131 109 131 0.97

6 26 0.0025 0.16 13.5 5.6 1 23 137 159 137 159 0.99

7 26 0.0047 0.29 12.6 3.1 1 23 165 187 165 187 0.99

8 26 0.00017 0.01 17.2 2.3 1 23 193 215 193 215 0.99

9 26 0.0022 0.14 13.6 2.5 1 23 301 323 301 323 0.98

10 26 0.0082 0.51 11.8 3.4 1 23 329 351 329 351 0.98

11 26 0.0011 0.066 14.6 0.7 1 23 357 379 357 379 0.98

12 26 0.0021 0.13 13.7 4.4 1 23 385 407 385 407 0.98

13 26 0.00079 0.049 15.0 2.0 1 23 415 437 415 437 0.99

14 26 0.00019 0.012 17.0 1.6 1 23 443 465 443 465 0.99

15 26 1.2e-05 0.00075 20.8 2.0 1 23 471 493 471 493 0.99

16 26 0.0001 0.0064 17.8 1.3 1 23 499 521 499 521 0.99

17 26 0.0018 0.11 13.9 2.0 1 23 591 613 591 613 0.97

18 26 2.3e-06 0.00014 23.0 0.8 1 23 619 641 619 641 0.98

19 26 0.00058 0.036 15.5 0.4 1 23 647 669 647 669 0.98

20 26 0.00061 0.038 15.4 4.9 1 23 675 697 675 697 0.98

21 26 0.0032 0.2 13.1 3.0 1 23 722 744 722 744 0.98

22 26 0.00023 0.014 16.7 2.5 2 23 751 772 750 772 0.96

23 26 0.002 0.12 13.8 1.9 2 23 779 800 778 800 0.94

24 26 0.00011 0.0066 17.8 1.4 1 23 806 828 806 828 0.98

25 26 0.0029 0.18 13.2 5.7 1 23 834 856 834 856 0.98

26 26 0.00031 0.019 16.3 0.7 1 20 862 881 862 884 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.04	2.5	9.7	2.3	6	23	2	19	1	19	0.96
2	26	0.01	0.64	11.5	3.1	1	23	25	47	25	47	0.98
3	26	0.00028	0.018	16.4	0.3	1	23	53	75	53	75	0.97
4	26	0.0029	0.18	13.2	2.5	1	23	81	103	81	103	0.98
5	26	0.00023	0.014	16.7	1.8	2	23	110	131	109	131	0.97
6	26	0.0025	0.16	13.5	5.6	1	23	137	159	137	159	0.99
7	26	0.0047	0.29	12.6	3.1	1	23	165	187	165	187	0.99
8	26	0.00017	0.01	17.2	2.3	1	23	193	215	193	215	0.99
9	26	0.0022	0.14	13.6	2.5	1	23	301	323	301	323	0.98
10	26	0.0082	0.51	11.8	3.4	1	23	329	351	329	351	0.98
11	26	0.0011	0.066	14.6	0.7	1	23	357	379	357	379	0.98
12	26	0.0021	0.13	13.7	4.4	1	23	385	407	385	407	0.98
13	26	0.00079	0.049	15.0	2.0	1	23	415	437	415	437	0.99
14	26	0.00019	0.012	17.0	1.6	1	23	443	465	443	465	0.99
15	26	1.2e-05	0.00075	20.8	2.0	1	23	471	493	471	493	0.99
16	26	0.0001	0.0064	17.8	1.3	1	23	499	521	499	521	0.99
17	26	0.0018	0.11	13.9	2.0	1	23	591	613	591	613	0.97
18	26	2.3e-06	0.00014	23.0	0.8	1	23	619	641	619	641	0.98
19	26	0.00058	0.036	15.5	0.4	1	23	647	669	647	669	0.98
20	26	0.00061	0.038	15.4	4.9	1	23	675	697	675	697	0.98
21	26	0.0032	0.2	13.1	3.0	1	23	722	744	722	744	0.98
22	26	0.00023	0.014	16.7	2.5	2	23	751	772	750	772	0.96
23	26	0.002	0.12	13.8	1.9	2	23	779	800	778	800	0.94
24	26	0.00011	0.0066	17.8	1.4	1	23	806	828	806	828	0.98
25	26	0.0029	0.18	13.2	5.7	1	23	834	856	834	856	0.98
26	26	0.00031	0.019	16.3	0.7	1	20	862	881	862	884	0.93

Sequence Information

Coding Sequence: ATGTGCAATCACAAGACTCGTTTCGCCGACAATCTAAAAAAGCACatgttaacgcacaccgacgagatgCGCTTCGTCTGCGACCGTTGCGGTTACAAATGCCAGGCAGACTCAACCTTGAAGCAGCACATGCGgaagcacaccggcgagaaaccgttcgcttGCGATCAGTGCGCTCAAAAGTTTAACGTGCTCGGAAACTTGAAGAGGCACATattaacgcacaccggcgagaaaaaATTCAGTTGCGATATCTGCGGCCACAAAAGTCGCCGACTGTCAGACCTAAAATTCCACATGCTGACGCATAAAGACGAGAAACCAATAAAATGTGCcatttgcgattttaaatgcgcCAGAGCTACGTATCTGAAGAAGCACATGTTGACGCACACGGGCGAAAAACACTACAAGTGCCACCTTTGCAGTTACGAATGCAGTCAATTCGGAAATTTAAAGTCGCACttgttaacgcacaccgacgagaagtcGTTTAAATGCGAACGTTGTGAATACGCATGCAAGTCGGGCAGGTATTTAAAATTGCACATGCGGGTGCATTCCGACGAGAAGCCTTATAAGTGTGACCTTTGCAAGTATGAGTCTAAGTTTCAAGGTAACTTACAGAAACATATGACGACGCACGACAAACTCCTCAAGTGTAACGTCCGCGAATACACATCCAAGTCGGCTAAGTGCGCCGGGTTTCCCCCATCTACGTCACTTCCAAAAGTAAGCGCGTCCGAGCAAGGCACGTGCGATTTCGACTTGAAACCTTTCGATTTCTCCCACAATTACGTGTGGTTAACCGAAGGGTTCAAGCTGTTCGAATCCGATCCCTGCGATTCCAACAAGTTCCAACCAATCGgaagcaagaagaagaaagagaagcCCAAGCCCTTCAAGTGCGAAGTGTGCGATCACAAATACCGATTCATCGAGGATCTAAGAAAGCACGAGCTGACACATTCCGACGAGCTGCGCTTCATCTGCGACCGCTGCGGCTACAAATGCCGCACGGTCTCGATTTTAAAGCAGCACATGCGCAAACACACCGGCGAGCAACCGTACAGTTGCGACCTCTGCGCTCAGAAATTTAACCTGCTCGGAAATATGAAGCGGCACATgctgacgcacaccggcgagaagaaATTCAGCTGTGAAtcttgcgattacaagtgccggcGGTTGACGGAcctgaagcgccatctcttgaaaCACGACAACCAACACGCGAAGCCGTTCAAGTGCACGGTTTGTGATTATAAATGCGCGCTCCCCATGTATTTAAAGCAGCACATGATAACGCACACGGGCGAAAAGCACTACAAATGCCACGTTTGCCCTTACGAATCCAATCGGTCGGGGAATTTGAGGCTGCACTTGCTGAAGCATACCGATGAGAAGCCGTTTAAGTGCGAGCATTGTGATTACGTGAGCAAGACGGCCAGGTATTTGCAAATACACATGCGAGTGCAttccgacgagaagccgtttaaGTGCGACCTTTGCGAGTACGCCTCGAAGTTTCAAGGTAACTTACAGAAACATATGACGACGCACGAGGAAGTGCTCGGGTGCAAAGTTTGCAAGTACACGTGTAAATGTTCTGCAATTTCGGACGCGACGATACCTGAACCCGACTTCACGTTTCTCGAATGTAAACCCGATTACGATTCGTTGAACGAAGTCGCGCGGCCGCAGCCGGTCGCCTGCGACAACGCGCGCCAGCCAATCGGACGCAAGAAGACGCATTCCGGCCAGAAGCTCTACAGCTGCGACGTTTGCGATTACACAAGCCGGTTCTCCGGAAACTTGAGGAACCACAAGTACAAACACACCGACGAAAAGCTCTTCATCTGCGACCGTTGCGGTTCGAGTTATCGCTCCGCCGTAAATTTAAAACGCCACATGCGAACACATACCGAGGAGAAACCGTATAGCTGCGACCTGTGCGCTCAGGCGTATCAAAAATCCGCAAGTTTGAAGCGGCATATgttgacgcacaccggcgagaagccgttcagttgtgaatattgcgattacaaatgccagCGTTTAAGAGACCTAAAGCGTCACATGCTGAAACATAACGGCGATTTTGATAATACAAGCCAATCCATCGGAAGCCAGAAAGAAGTCCAGGCTGGTGATGAATTGTCGTTCATTTGCGACCGTTGCGGTTTCAAATGCCGCACGGGCGTGCTTTTGAGACAGCACATGCGGAAACACACCGACGATGAACCGTTAAGCTGCCACCTgtgcaatcaaaaatttaaatacgccGTCACTCTGCAAAGACACATGTCACTGCACGGCGACGAGAAGCCGCTGACTTGCGAATTTTGCGATTACGTGTGCCGGCGTTTGTCGGATCTGAAACAGCACAAGGTGATACATagcggcgagaagccgttcaagtGTGAGATTTGCGACTACAGATGCGCACTGCCCGCGTATTTGAAACGGCACATGTCGTCGCACACCGCCGGCCGGAAACACAAATGTCATCTCTGCAGTTACGAATGCAGTCGGCCTGCGAGTTTAAACTTGCACATGCTGAAGCATTCCGACGAGAATCCTTTCAGCTGCGAACTTTGCGGGCAAGGGTTTAAGACGGCTGGATGTTTAAAACAGCACATGCCAGTTCATTCCGTCGAGAAGAAAACTGTTTAA
Protein Sequence: MCNHKTRFADNLKKHMLTHTDEMRFVCDRCGYKCQADSTLKQHMRKHTGEKPFACDQCAQKFNVLGNLKRHILTHTGEKKFSCDICGHKSRRLSDLKFHMLTHKDEKPIKCAICDFKCARATYLKKHMLTHTGEKHYKCHLCSYECSQFGNLKSHLLTHTDEKSFKCERCEYACKSGRYLKLHMRVHSDEKPYKCDLCKYESKFQGNLQKHMTTHDKLLKCNVREYTSKSAKCAGFPPSTSLPKVSASEQGTCDFDLKPFDFSHNYVWLTEGFKLFESDPCDSNKFQPIGSKKKKEKPKPFKCEVCDHKYRFIEDLRKHELTHSDELRFICDRCGYKCRTVSILKQHMRKHTGEQPYSCDLCAQKFNLLGNMKRHMLTHTGEKKFSCESCDYKCRRLTDLKRHLLKHDNQHAKPFKCTVCDYKCALPMYLKQHMITHTGEKHYKCHVCPYESNRSGNLRLHLLKHTDEKPFKCEHCDYVSKTARYLQIHMRVHSDEKPFKCDLCEYASKFQGNLQKHMTTHEEVLGCKVCKYTCKCSAISDATIPEPDFTFLECKPDYDSLNEVARPQPVACDNARQPIGRKKTHSGQKLYSCDVCDYTSRFSGNLRNHKYKHTDEKLFICDRCGSSYRSAVNLKRHMRTHTEEKPYSCDLCAQAYQKSASLKRHMLTHTGEKPFSCEYCDYKCQRLRDLKRHMLKHNGDFDNTSQSIGSQKEVQAGDELSFICDRCGFKCRTGVLLRQHMRKHTDDEPLSCHLCNQKFKYAVTLQRHMSLHGDEKPLTCEFCDYVCRRLSDLKQHKVIHSGEKPFKCEICDYRCALPAYLKRHMSSHTAGRKHKCHLCSYECSRPASLNLHMLKHSDENPFSCELCGQGFKTAGCLKQHMPVHSVEKKTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -