Pinq024514.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Prosopocoilus inquinatus
Gene Symbol
-
Assembly
GCA_036172665.1
Location
CM069876.1:50509730-50514508[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.00045 0.028 15.8 0.2 1 23 264 286 264 286 0.98
2 20 0.00015 0.0092 17.3 4.4 1 23 291 313 291 313 0.97
3 20 0.00059 0.037 15.4 0.3 1 20 319 338 319 340 0.93
4 20 0.0059 0.37 12.3 0.6 3 23 348 369 347 369 0.94
5 20 0.0074 0.46 12.0 4.4 1 23 374 396 374 396 0.98
6 20 0.034 2.1 9.9 0.8 2 23 406 428 405 428 0.95
7 20 0.00014 0.0088 17.4 0.1 1 23 433 455 433 455 0.98
8 20 1.5e-06 9.4e-05 23.6 0.2 1 23 461 483 461 483 0.98
9 20 3.1e-05 0.0019 19.5 0.1 1 23 489 512 489 512 0.94
10 20 2.4e-05 0.0015 19.8 0.9 1 23 518 540 518 540 0.98
11 20 0.043 2.7 9.6 1.1 1 23 1002 1024 1002 1024 0.97
12 20 0.00013 0.0079 17.5 0.1 1 23 1029 1051 1029 1051 0.98
13 20 7.6e-05 0.0048 18.2 1.4 1 21 1057 1077 1057 1078 0.94
14 20 0.00013 0.0079 17.5 1.7 1 23 1086 1109 1086 1109 0.97
15 20 4.7e-05 0.0029 18.9 2.3 1 23 1114 1136 1114 1136 0.99
16 20 0.00051 0.032 15.6 0.3 2 23 1146 1168 1145 1168 0.95
17 20 0.00015 0.0091 17.3 0.1 2 23 1174 1195 1173 1195 0.97
18 20 8.4e-06 0.00053 21.2 0.1 1 23 1201 1223 1201 1223 0.98
19 20 0.00034 0.021 16.2 0.4 1 23 1229 1252 1229 1252 0.96
20 20 3.8e-05 0.0024 19.2 2.2 1 23 1258 1280 1258 1280 0.98

Sequence Information

Coding Sequence
ATGGTGGAACGAACGTACCTCATTCCGGAAACCTCTTTATACCAGGACATGCGCGGGAAACTGCTGACGACTGGTGAATCTCGGTTAATAAAAACGCCGGTGGCGCAAGTGAAGACCGCCACCGAAAGCAATGATTCGCAAGTGCGGTTCACCCCGAATTTGGCGAATTTGAGTCGACGTTTAAAATCGACGGTGTCGGTAAGTCCGGGCGGTAATGGATCTTTGGCGGCGCCCTCTTCGACAGCGTCGGGCGCCATCAGCGGAAACAACCCCCAAGCAAACCCCCAGGGTGTTTCAATTCGGAAGCTGCTTCTAAAAGGAGTGCAAGAAGGTAGCGTGGGGGTTAGTGGAACTCCGAACAGTAGCTCACAAGCGCATTTCCAGGAGACGTTGGGGGGAAGTCCGGAGGTTCAAGCGACGGCGGCATCAGCTCACGCACAAAATGAAAAGCCACAGGGTGTTACGAACCAAAGTCATTCGTTGCTGTTGCAAAATCCGTCTGGGATTGAGAGAAAATCGCAGCAACTTCACGTAATTGAGATGGTTCAACCCCCAAATGAAAAGCGCGATTTAGAAGATAAGGCGACGCCTTCTCAAACAGAAACCAATAAGTTGATTTACGGCCAGCCGATTATAAAGAAGATTGCTTTAAACCCGAGTTTTTTACAATCGAATTCCTCGCAGGATGTCGCTTTGGTCCCCTCCGGCGGCTCTGACTCGAGCGACGGCGACGGGTCGAGTTTTCGCCGAGTTAAGTCACCGCCTGGAGCTAAGCGCCACTCGGGGATGTACAGGTGCAAGACTTGCGCGTTGAGCTTCGCCACCCCGGGCAAGCTCGCAACTCACATGTACgtgcataaaaagaaaaagcacaAGTGCGAGCGGTGCGGAAAAGCTTTCCACACGTCGAGCCACCTGAACGGGCACATGGTGGTCCACTCGGTCGACAAGAATTTTCCCTGCGGCGTCTGCGGGAAAATCTACAAGACGAAGGCGTCGCTGAAGGTGCACTCTTGCGTCGATGCAGTCAGGGAGAGGAGCTGCGGCATCTGCGGCAGGCAGTTTCGTAAATTGCAAGCCCTCAAGGACCACTTCACCACGGAACACTTGAAAGTAAAACACAAATGTAACATCTGCAAGAAGGAGTACCGCCTGATTAAGTCGCTGAGGGAGCATAGGAAAACGCACGACCCTCTTTTCATCGCCCCCACGTTGAAATGCGACCGGTGCGAGGCGACGTTCGGGAACAGGATGACCTTGAGAAACCACAAGTTGAAAGTGCACGAGGGCGTGTCGTTCGTGTGCGACATCTGCGGCAAGGAGATCAACTCCTCGGCCAGTCTCCTGATTCACACGaggacgcacaccggcgagaagccgttcgtgTGCGAGACTTGCGGCAAGGGCTTCATTTCGAAGGGATTGTTGAGAACGCACATTCGCGTGCACACCAAGGAGAAGCCGTATCCGTGCAAGGTGTGCGGCAAGCGATTTTCGCAGCCGGGGTCGGTGAAAACCCACGTGATGGGCGTCCACCGAGGCGAAAGGCGTTTCCAGTGCGACATTTGCGGCAAGAAGTACGCGACGAAAGCCGATATGAAAACGCACACGAAACTCCACGGGATTCCCTTGGCGGTTAGCAAGAGGAAACCCTCTGCGAACGTGAAAAAGTACTACAAGGTTCTGCTCAAGTCCGTCAACAAAGTCACCAAGAGGGTGGTGGAGCGCACCTATCTTATTCCGGAGTCCGCTCTGGACCAAGACGTGCGTAAGAACTTACAAGCGACGGCCGAAACCAACTCGCAAGTGCGGTTTGTTCCGAATCTGGCGCTGGGCCGGCATTTAAAGTCGACGCTGTTGGCAAGCCTGAACCACAAAACTCTGACGCCCTCTCAAACCCAGGCTACGGTACTGGACGCCTTCAGCAAGGATAACTCGCGAGCCGTGAACGTCGAGAGGCAATTTTCAATTCGGAAGCCGCTTCATCATCATGGAGCACAAAAAGCTGTCGGCGGGAGAATTCGGCGTCTAAAATCGACTTTCCCTGCGAATTATGAGAATAAAGCATTGACGTCCTCTTACGATCACTCTCGAAACGTGTTAACGTCGACGCGAGCGCAAGCGCAAGCTCTTGTGCCGGACCGACGAAAAGCTACTGTCCAAAACCAAGAAACAGTTATCGTCCAAAACCAACAACAAGCTGTTTTCCTGAACCAACAGGAGCCTATTgcccaaaaccaacaaaaaccTGGTGTCCAAACCCAAAGAAAAGCTGTGCTCCGTAACCAACGGGAAGCTACCGTACAGGACCAACAAAATAAAGTGGTGGTTGCGAGCCGGTATAACCCTCAGGGTCTCTTAATCCGTGAGTTTCCCTTACGCGGTTACTACCAGGGGGAGAATCCGGCGGTCGGCAGACGAAATAATCCGTCGCAAACCGCCTTccagaaccaaccgagtaacGTTGCGCGGATGAGTCAGAATTTACGTAATCCAAGCCGCTCCCTCGAGGAGGAGACGTTGCGGGGAAGCCCGCGAGTTAACCCGACGGCACTAAATAAGTTGCAGGGCGGAAACAACCTGCCGGCTCAGTTCGCCCAAAACCAACCTACGGACGTTACGGTTCAGAAAAGACCCCAGGCGCGCGTCGCCCCCTCGAATCCACcgcaaaaatcaaatcaaaatctgTTTGTTGCATTGCGCCGGCGTCGCTACGATTCGGCGGCCAATCGAACAACAACAACACCGCCGTTGGTCAATTTGCAAAAAACTTCGTCTTCCTCCTCTTCGACGCAAGATGAAGAAGACGAGGAACTCGAGATGGGCAACGGCCCACAAGCACAGCGTGACCAGCCAATTATAAACAAGATAATCCTCCTCCAAACGAACAAGTCGTCTCCGGTGCCGCCGACTCGATCCGTTTCGAACCAACCACGAGGGGTTATCGGACACCCCCCGAGAATTAAACCAACGCCTGGGGTTCCCGGACACTCCCCGGTGGCGTACAAGTGCAAAACCTGCGCGCAAAACTTCGACACTCTTGGGAAACTGAGGGGGCACAGGTATGTGCACAGGAAGCGGCCGTACGAGTGCGAGCGCTGCGGAAAATCGTTTCCCATCTTGAGCCGGCTCAACGTCCACATGTCGATCCACATGGAGGAGAAGAAGTTCCGCTGCGACGTCTGCGGGAAGATATACAAGACGAAGAGCTCGCTGAGGCTCCACGCGTGCACGAACACCATCACGGAGGGGGGCTACGCCTGTAAAATCTGCAGCAGGAAGTTCTACCGGTTGCAGAGCCTCAAGAATCACGTGAAGACCGTGCACCTGAACGTGAAATATAAGTGCGGGGTCTGCCACAAGGAGTACCGCCAGAGCGGTTCGCTGAAGATACACGAGAGAAGGCACGATCCCCATTTCGTGGCGCCCGAGTTGAAGTGCGAGCGGTGCGGGGCGACGTTCACGTTCAAGGCCGCGCTGACGCAGCACAGGTTGAGCGTGCACGAGGGTAAACTGATCGTGTGCGACGTCTGCGGCAAGGGGATCACCTCCTGGACCAGCTTCCAGAGTCACTTGaggacgcacaccggcgagaagccgttcgtgTGCGAGACCTGCGGCAAGGCGTTCGGCTCGAGGAAGTTACTCATCATACACATCCGCATACATACTAAAGAAAAGCCGTACCCGTGCAAGCTGTGCGGCAAGAGATTCTCGCAGTTTGGTTCGGCGAAGATCCACCTGCTGAGGGTGCACCGACGCGAAAAGCAGTTTCGCTGCGATATTTGCTCGAAGATGTTCATGTCGAAGGCTCAGCTGAAGACCCACACGAAATCGCACGGCATTCCCTCATCAGAGTTGGGAACTAAGGCCAAGATCATCAAGAGTTGA
Protein Sequence
MVERTYLIPETSLYQDMRGKLLTTGESRLIKTPVAQVKTATESNDSQVRFTPNLANLSRRLKSTVSVSPGGNGSLAAPSSTASGAISGNNPQANPQGVSIRKLLLKGVQEGSVGVSGTPNSSSQAHFQETLGGSPEVQATAASAHAQNEKPQGVTNQSHSLLLQNPSGIERKSQQLHVIEMVQPPNEKRDLEDKATPSQTETNKLIYGQPIIKKIALNPSFLQSNSSQDVALVPSGGSDSSDGDGSSFRRVKSPPGAKRHSGMYRCKTCALSFATPGKLATHMYVHKKKKHKCERCGKAFHTSSHLNGHMVVHSVDKNFPCGVCGKIYKTKASLKVHSCVDAVRERSCGICGRQFRKLQALKDHFTTEHLKVKHKCNICKKEYRLIKSLREHRKTHDPLFIAPTLKCDRCEATFGNRMTLRNHKLKVHEGVSFVCDICGKEINSSASLLIHTRTHTGEKPFVCETCGKGFISKGLLRTHIRVHTKEKPYPCKVCGKRFSQPGSVKTHVMGVHRGERRFQCDICGKKYATKADMKTHTKLHGIPLAVSKRKPSANVKKYYKVLLKSVNKVTKRVVERTYLIPESALDQDVRKNLQATAETNSQVRFVPNLALGRHLKSTLLASLNHKTLTPSQTQATVLDAFSKDNSRAVNVERQFSIRKPLHHHGAQKAVGGRIRRLKSTFPANYENKALTSSYDHSRNVLTSTRAQAQALVPDRRKATVQNQETVIVQNQQQAVFLNQQEPIAQNQQKPGVQTQRKAVLRNQREATVQDQQNKVVVASRYNPQGLLIREFPLRGYYQGENPAVGRRNNPSQTAFQNQPSNVARMSQNLRNPSRSLEEETLRGSPRVNPTALNKLQGGNNLPAQFAQNQPTDVTVQKRPQARVAPSNPPQKSNQNLFVALRRRRYDSAANRTTTTPPLVNLQKTSSSSSSTQDEEDEELEMGNGPQAQRDQPIINKIILLQTNKSSPVPPTRSVSNQPRGVIGHPPRIKPTPGVPGHSPVAYKCKTCAQNFDTLGKLRGHRYVHRKRPYECERCGKSFPILSRLNVHMSIHMEEKKFRCDVCGKIYKTKSSLRLHACTNTITEGGYACKICSRKFYRLQSLKNHVKTVHLNVKYKCGVCHKEYRQSGSLKIHERRHDPHFVAPELKCERCGATFTFKAALTQHRLSVHEGKLIVCDVCGKGITSWTSFQSHLRTHTGEKPFVCETCGKAFGSRKLLIIHIRIHTKEKPYPCKLCGKRFSQFGSAKIHLLRVHRREKQFRCDICSKMFMSKAQLKTHTKSHGIPSSELGTKAKIIKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-