Pinq024241.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Prosopocoilus inquinatus
Gene Symbol
-
Assembly
GCA_036172665.1
Location
CM069876.1:47164934-47175161[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 36 0.058 3.7 9.2 1.5 1 23 108 130 108 130 0.98
2 36 0.0036 0.23 13.0 1.6 1 23 136 158 136 158 0.98
3 36 0.00096 0.06 14.8 3.0 1 23 164 186 164 186 0.98
4 36 0.0085 0.53 11.8 2.0 3 23 194 215 192 215 0.96
5 36 0.00035 0.022 16.1 1.8 1 23 222 244 222 244 0.98
6 36 0.0015 0.096 14.1 3.6 1 23 252 274 252 274 0.99
7 36 0.049 3.1 9.4 5.0 1 23 280 302 280 302 0.98
8 36 0.0011 0.069 14.6 2.4 1 23 308 330 308 330 0.98
9 36 0.016 1 10.9 1.4 1 23 375 397 375 397 0.98
10 36 0.00075 0.047 15.1 1.1 1 23 403 425 403 425 0.97
11 36 0.00047 0.03 15.7 3.6 1 23 431 453 431 453 0.98
12 36 0.0001 0.0065 17.8 1.3 2 23 461 482 460 482 0.96
13 36 0.3 19 6.9 4.4 1 23 488 510 488 510 0.98
14 36 0.0015 0.091 14.2 1.4 2 23 517 538 516 538 0.97
15 36 0.3 19 6.9 6.4 1 23 544 566 544 566 0.98
16 36 0.00067 0.042 15.3 2.1 1 23 572 594 572 594 0.99
17 36 0.00036 0.023 16.1 2.4 1 23 600 622 600 622 0.99
18 36 0.016 1 10.9 1.5 2 23 697 718 696 718 0.96
19 36 0.0077 0.48 11.9 3.4 1 23 724 746 724 746 0.98
20 36 0.00041 0.026 15.9 2.9 2 23 753 774 752 774 0.96
21 36 0.0054 0.34 12.4 0.7 1 23 780 803 780 803 0.94
22 36 3.5e-06 0.00022 22.4 0.4 1 23 809 831 809 831 0.98
23 36 3.7e-05 0.0023 19.2 1.7 1 23 837 859 837 859 0.98
24 36 0.00012 0.0076 17.6 2.7 1 23 865 887 865 887 0.98
25 36 0.0025 0.16 13.4 5.0 1 23 893 915 893 915 0.98
26 36 4e-05 0.0025 19.1 3.1 1 23 921 943 921 943 0.99
27 36 0.00085 0.053 14.9 0.9 1 23 949 971 949 971 0.99
28 36 0.0082 0.51 11.8 1.8 1 23 1021 1043 1021 1043 0.98
29 36 0.00012 0.0074 17.6 1.8 1 23 1049 1071 1049 1071 0.98
30 36 0.00073 0.045 15.2 1.5 1 23 1077 1099 1077 1099 0.98
31 36 4.9e-05 0.003 18.8 3.5 1 23 1105 1127 1105 1127 0.98
32 36 0.1 6.3 8.4 4.1 1 23 1133 1155 1133 1155 0.97
33 36 0.00027 0.017 16.5 0.5 2 23 1162 1183 1161 1183 0.97
34 36 0.0065 0.41 12.2 5.4 2 23 1190 1211 1189 1211 0.98
35 36 0.00086 0.054 14.9 2.2 1 23 1217 1239 1217 1239 0.99
36 36 0.0032 0.2 13.1 2.0 1 23 1245 1267 1245 1267 0.98

Sequence Information

Coding Sequence
ATGCATCATTTATTTCCTTTACGGCGATTCGCAACCTCTTATACGGATATTAGTACCATCATCGGCGTAACATTCGAAGATGTGTTATTAACTGTTATTAATGCACGCGACAAACAGAAGTGGCCCCAAAGTGCTGCCTTGGGGCACTCCAAAATCAATACGTTCTGCAAATTCGGTTGCTCGCTCCgtcgaaaatcaatttttaaatcgaactTGCTCAGattcTCCGAATTTCGTACGCCTGCAATTCCCGAACACGTCCGAGCCGTTCCCGACCTTGAATCTCCCGAATACGTGCTGTTAAATAACGGCGCGAAGCGATACTTttgcgacctctgcgattacaaatgcgaACCGCTCGAAAGCATGAGACAGCACTTGAGGATCCACTCCGGCGAGAAGCCCTTTTCCTGCGCGATCTGCAATTACAAGTGCAGATTCCCCGCAAGtctgaaacagcacgtgctgaTGCACACCGACGACAAGCAGTTCGTCTGCGACCGCTGCGGTCACGCGTGCCGCGAGGCGGGTACCTTGAAGAAGCACATGCAGAAACACGCCGGCGAGAAGCTATTCGGCTGCGACCGGTGCGAGCTGAAGTTTCAGCACTCCGGAAACTTGAGCAGGCACATCCGCGagaaacacaccggcgagaagcagCCGTTCGTGTGCgagctttgcgattacaaaactCGCCGCTTGGCAACTCTAAAGCGCCACATGTTCAAACACGAAGACGGTTACGAGAAGCCATTCAAGTGCGAGCTCTGTGATTACCGGTGCGTGCAAGCTGCGTGTTTGAAACGGCACGTgctgacgcacaccggcgaaaagAACTACAAGTGCCACCTTTGCAGTTACGAGTGCAATCGGGCGCCGAATTTGAGGTTGCACTTTTtgaagcacaccgacgagaagccattCAACTGCGAACGTTGCGACTACAAAGGCAAAACGGCCAGGCATTTACAAATGCACATGCGAGTACATTCAGAGGAGATACCGTTTAAGTGTAAAGTTTGCAAATGGCCTAAATCTCCAATTCTAAGCACAACCGAATACAACAGGAAAGGTGCCGAATACGTACTGAATTACAAGCTGTTAAGTAACGGCGTGCGGCTGTTCgtttgcgatctttgcgattacaaatgcgaACCGGTTAGCAGCATAAAGCAGCACATGAAGACCCAttccgacgagaaaccgttcgccTGCGAGATCTGCGATCACCGATCTCGATTCGCCGGGAGCCTAAAACAGCACatgttaacgcacaccgacgagaagcttTTCGTCTGCGATCGTTGCGCTTACAAGTGCCGCACGGCGTCTAGCTTGAAACAGCACATGCGAAGACACGACACGGACGCGAACCCGCTCAGCTGCGACCTGTGCGATCAGAAATTTAGATACGCCGAGAATTTGAAAAGGCACAAGCtaaaacacaccggcgagaagcctttCACCTGTGAAACCTGCGATCGCAAGTTTCTACGCTTGGACTATCTGAAATGCCACATGCTGAGACACAACAGCGAGAAACCGATCAAGTGCGCCCTGTGTGATTTTAAGTGCGCGCAGCTTGCGTATTTGAAACGGCACATGTTAACTCATACCGGCGAGAAACGTTACAAATGCCACCTTTGCAGCTACGAATGCAGTAAATCGTTCAAtatgaccttgcacgtgttaaAGCACAGCGACGAGAGGCCGTTTAAGTGCGACCGTTGTGAATACGCGAGCAAAACGCGGAGATACTTGAAACTGCACATGCGCGTGCATTcggacgagaaaccgttcaagtGCGACCTCTGCAAATACGAGTCCAAGTTTCAAGGTAACTTACAGAAACACATGACGACTCACGAGAATCTACTCAAGTGTAATGTCTGCGAGTACACGTGTAAATGCTTTGGGATTTCTAAGTCTGCAATTCCAAACATAGGGAAAATTGAACATGCCTTATTGGCTTCTGATTTTAAATCTCCTGAAAACCTACTGTCAAATGACAACGACTTGAAGCATGACTGCGAAAGCACAGCGCAGAAAGCTCAACGCAAGAAGATCCGTTCCAAACAGAAGCCGCTCAACTGTGAGATTTGCGAGTACAAATGCCGATTGCCGGGAAAATTTGAGCGACACATGTTGAGACACACCGACGCGAAGCCCTTCACCTGCGAGACTTGCGATTACAAGAGCCGATTCTTCGGAAAATTAAAGCGGCACATGCTGAAACACACCGCGGCAAAGCCGGTCGTCTGCGAGCGTTGCGACTACAAATGCAGAGACCGCTCAACTTTAAAACGGCACATGCTCCAACACACCGGCGAGACGCCTTACAGCTGCGCGATTTGCCCTTACAAGTGTCGCTCCGCCGGAAGTTTGAAGCAACACGCCGCGTCGAAGCACACCGGCGACAAGCCGTTTATTTGCGACCGCTGCGGTCAGAAATTCCCCAGGGAAGGTGCCTTGAAGCAGCACATGCGCACGCATTCCAGCGAGAAACCCTTCACTTGCGATCTATGCCCGCAAAAATTCAGAGATTCCGGAAAACTGAAACGGCACAAGCTGACACACTCGGGCGTGAGACAGTTCAGCTGTGACCACTGCGATTTTAAACTGCAACGCGCGTCGGATCTGAAACGCCACATGCTGACCCACAAAGGCGAGAAACCGTACGAGTGTGCGctctgcgattttaaatgcgCGCACTCTACGTACTTGAAGCGGCACATGATGAGGCACACCGGCGAGAGAAAATTCAAGTGTAATATTTGCGGCCACGAATGCAATCAGGCTTCGAATTTGAGGTTGCACTTGttgacgcacaccgacgagaggCCGTTTAAGTGCGGACGTTGCGAATACGCGAGCAAAACGGCGAGGTATTTGAAATTGCACATGCGAGTGCATTCGGATGAGAAGCCTTTTAAGTGTAAGCTTTGCAAATTGTCTGAATTTTGTGAACCTCCCATTTTGGGTTTGAAGAAAACCGAGCACGGCCAAAGCGCTCTCGAATAcgtaccgaaatacgtattattaaataacggCGTGAGGCTGTTCGTTTGCGAACTGTGCGATTACACGTGCCAACCGATGAGCAGCATAAAACAGCACATGAGGACCCATTCCGACGAGAAACCCTTCGTCTGCGAGATCTGCAATCACAGAACTCGATTCCCGGGAACCCTGCAAAAGCACATGATGACGCACAGCGACGAGAAGCCCTTCGTCTGCGACCGTTGCGCTTACAAAACCCGCACGGCGTCAACCTTGAAGATGCACATGCGAAGACACACCGGCGAGAGACCGTTTACTTGCGATCTGTGCGAGCAGAAATTTCAACAGTCCGGACATTTGAAGAGGCACATGTCGACGCACACCGTCGACAAGCCGTTCAGCTGCGAAcagtgcgattataaatgccgacgcaTGGATATTCTCAAACACCACATGATCGTGCATAAGAAAGAGAAGCCGATAGAATGCgccctttgcgattacaaatgcgcAAATCCCGTGTATCTGAAGCGGCACATGCTAACCCACACCGGCGAGAGACCCCAGAAATGCCATCTTTGCAGTTACGAGTGCAATCGGAGCGAAAACTTAAAGTCACACTtattaacgcacaccgacgagaagccgtttaaGTGCGAACATTGTGAATACGCAAGCAAATCGGCCAGGTATTTGAAATTGCACTTGCGAGTGCATTCGGATGAGAAACCGTTTAAGTGCGACGTCTGCAAATACGCGTCCAAGTTTCAAGGTAATTTACTGAAACATAAGACGACGCACGAGAAACTGCTCAAGAACTCTTCCTGA
Protein Sequence
MHHLFPLRRFATSYTDISTIIGVTFEDVLLTVINARDKQKWPQSAALGHSKINTFCKFGCSLRRKSIFKSNLLRFSEFRTPAIPEHVRAVPDLESPEYVLLNNGAKRYFCDLCDYKCEPLESMRQHLRIHSGEKPFSCAICNYKCRFPASLKQHVLMHTDDKQFVCDRCGHACREAGTLKKHMQKHAGEKLFGCDRCELKFQHSGNLSRHIREKHTGEKQPFVCELCDYKTRRLATLKRHMFKHEDGYEKPFKCELCDYRCVQAACLKRHVLTHTGEKNYKCHLCSYECNRAPNLRLHFLKHTDEKPFNCERCDYKGKTARHLQMHMRVHSEEIPFKCKVCKWPKSPILSTTEYNRKGAEYVLNYKLLSNGVRLFVCDLCDYKCEPVSSIKQHMKTHSDEKPFACEICDHRSRFAGSLKQHMLTHTDEKLFVCDRCAYKCRTASSLKQHMRRHDTDANPLSCDLCDQKFRYAENLKRHKLKHTGEKPFTCETCDRKFLRLDYLKCHMLRHNSEKPIKCALCDFKCAQLAYLKRHMLTHTGEKRYKCHLCSYECSKSFNMTLHVLKHSDERPFKCDRCEYASKTRRYLKLHMRVHSDEKPFKCDLCKYESKFQGNLQKHMTTHENLLKCNVCEYTCKCFGISKSAIPNIGKIEHALLASDFKSPENLLSNDNDLKHDCESTAQKAQRKKIRSKQKPLNCEICEYKCRLPGKFERHMLRHTDAKPFTCETCDYKSRFFGKLKRHMLKHTAAKPVVCERCDYKCRDRSTLKRHMLQHTGETPYSCAICPYKCRSAGSLKQHAASKHTGDKPFICDRCGQKFPREGALKQHMRTHSSEKPFTCDLCPQKFRDSGKLKRHKLTHSGVRQFSCDHCDFKLQRASDLKRHMLTHKGEKPYECALCDFKCAHSTYLKRHMMRHTGERKFKCNICGHECNQASNLRLHLLTHTDERPFKCGRCEYASKTARYLKLHMRVHSDEKPFKCKLCKLSEFCEPPILGLKKTEHGQSALEYVPKYVLLNNGVRLFVCELCDYTCQPMSSIKQHMRTHSDEKPFVCEICNHRTRFPGTLQKHMMTHSDEKPFVCDRCAYKTRTASTLKMHMRRHTGERPFTCDLCEQKFQQSGHLKRHMSTHTVDKPFSCEQCDYKCRRMDILKHHMIVHKKEKPIECALCDYKCANPVYLKRHMLTHTGERPQKCHLCSYECNRSENLKSHLLTHTDEKPFKCEHCEYASKSARYLKLHLRVHSDEKPFKCDVCKYASKFQGNLLKHKTTHEKLLKNSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-