Pinq024076.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Prosopocoilus inquinatus
Gene Symbol
-
Assembly
GCA_036172665.1
Location
CM069876.1:44815388-44840878[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 45 0.019 1.2 10.7 1.1 2 23 10 31 9 31 0.97
2 45 0.0065 0.41 12.2 4.1 1 23 37 59 37 59 0.91
3 45 0.096 6 8.5 3.9 1 23 65 87 65 87 0.97
4 45 0.64 40 5.9 0.7 1 23 93 115 93 115 0.96
5 45 6e-06 0.00038 21.7 0.3 1 23 121 143 121 143 0.99
6 45 0.0044 0.28 12.7 3.2 1 23 149 171 149 171 0.98
7 45 0.00085 0.053 14.9 3.1 1 23 177 199 177 199 0.97
8 45 3.3 2.1e+02 3.6 5.2 1 23 242 264 242 264 0.98
9 45 0.0026 0.16 13.4 2.2 1 23 270 292 270 292 0.97
10 45 0.00013 0.0081 17.5 0.2 1 23 298 320 298 320 0.98
11 45 0.015 0.94 11.0 0.4 3 23 328 348 326 348 0.89
12 45 0.002 0.12 13.8 5.2 1 23 354 376 354 376 0.99
13 45 1.3e-05 0.00082 20.6 1.0 1 23 382 404 382 404 0.99
14 45 0.0002 0.013 16.9 4.1 1 23 410 432 410 432 0.99
15 45 0.02 1.3 10.6 2.4 1 23 438 460 438 460 0.98
16 45 1.9 1.2e+02 4.4 3.6 1 23 466 488 466 488 0.98
17 45 0.18 11 7.6 0.4 1 23 493 515 493 515 0.98
18 45 0.00025 0.016 16.6 1.2 1 23 521 543 521 543 0.99
19 45 0.061 3.8 9.1 1.1 1 23 585 607 585 607 0.98
20 45 0.0021 0.13 13.7 1.7 1 23 641 663 641 663 0.98
21 45 0.00017 0.011 17.1 2.5 1 23 678 700 678 700 0.98
22 45 1.9e-06 0.00012 23.3 1.6 1 23 715 737 715 737 0.98
23 45 0.00095 0.059 14.8 2.9 1 23 743 765 743 765 0.96
24 45 0.0087 0.55 11.8 1.2 1 23 771 793 771 793 0.98
25 45 0.066 4.1 9.0 2.7 1 23 835 857 835 857 0.98
26 45 0.84 53 5.5 0.2 1 23 863 885 863 885 0.93
27 45 0.00041 0.025 15.9 1.3 1 23 891 913 891 913 0.98
28 45 0.0099 0.62 11.6 0.5 1 23 928 950 928 950 0.98
29 45 8.2e-05 0.0051 18.1 3.9 1 23 956 978 956 978 0.98
30 45 0.76 48 5.6 2.6 1 23 984 1006 984 1006 0.97
31 45 0.33 21 6.8 0.8 1 23 1012 1034 1012 1034 0.96
32 45 0.00031 0.019 16.3 1.6 1 23 1040 1062 1040 1062 0.98
33 45 0.001 0.065 14.7 3.1 1 23 1068 1090 1068 1090 0.97
34 45 10 6.2e+02 2.1 1.2 1 13 1096 1110 1096 1112 0.76
35 45 0.77 48 5.6 0.5 1 23 1157 1179 1157 1179 0.96
36 45 0.018 1.1 10.8 3.7 1 23 1185 1207 1185 1207 0.99
37 45 0.00031 0.02 16.3 0.9 1 23 1213 1235 1213 1235 0.97
38 45 0.014 0.85 11.2 2.4 1 23 1241 1263 1241 1263 0.97
39 45 0.022 1.4 10.5 0.6 1 23 1269 1291 1269 1291 0.97
40 45 0.00094 0.059 14.8 0.8 1 23 1297 1319 1297 1319 0.98
41 45 0.00029 0.018 16.4 2.0 2 23 1326 1347 1325 1347 0.97
42 45 0.0007 0.043 15.2 3.9 1 23 1353 1375 1353 1375 0.98
43 45 0.49 30 6.3 5.1 2 23 1382 1403 1381 1403 0.96
44 45 0.0025 0.15 13.5 0.5 1 23 1409 1431 1409 1431 0.98
45 45 0.52 32 6.2 6.3 1 23 1437 1459 1437 1459 0.97

Sequence Information

Coding Sequence
ATGAAACACACCGGTGAAAAACCATTGAAATGTAACGTGTGCGATTTTCGAAGCAGATACCAACAGTCGTTAGACAAACACGTTTTGACGCACAGCGATGAGAAACCGTTCAAGTGCGACAGGTGCGATTACAGTTGCAGAACTCGCTCTTATTTGCTTCGACACAGCGTGCTACATGAAGATAAGAAACCGTTCAAATGTAGCGAGTGCGATTTTAGATGTAAAACTAAACAAGGTGTGAGACAGCACAGTGCGACGCACACCGATGAGAAACCGTTTAAGTGTATCAAGTGCGATTACAGGGGCAGGTCGAGTACAGATTTAGGTCGACATGTAACGATGCACACCGGTGAGAAGCCTTTCCAATGTAACGTGTGCGATCGCAGGTTTAGAATTTCAGGAAATTTGAAGGTCCACATTGCGACACACAGCGATGAAACACCGTTTAAATGCGACAGATGCGATTATAGGTGTAAAGTACGTGGAGATTTACGTCAGCATGTAATGAGACACGGCGATGAAAAACCTTTCAACTGCCGGGTATGCGGTTTTAGGTGTAAAACTCAAGACTCATTAAGATCGCATATTTTGTCGCACACCGATGAAAAACCgaAACGCGTTGCTCGGAATTCCCCGGAGAAAATTTTTCGCAAACGTTGCGTCGTCGCCTTGATTCGCTGCCAACCACCCGACGAAAGAAAGCAACTCGACCGCCAAAAGAAATACAGATGCGATTTCTGCGGCTACAAGTGTCACGCACGTACAATATTAAACCGACATATAAtgaaacacaccggcgagaaacctttCAAATGTACCGTGTGCGATTTTAGAACATTCCACGCGAAAGAGTTGAAGATCCACATgttgatacacaccggcgagaaaccgttcgagTGCGCCGAATGCGATTATAGGGCTAGAACGCAGGGGAATTTACGTCGGCACTTGTTGATACACACTAACGACAGGCCTTACGAATGTATCGCGTGCGATTATAAGAGTCGGACCGCGCAGAATTTGAAAAATCACATCATGACGCACagcgacgagaaaccgttcaagtGCGGCAAGTGCGATTATAGTTGTAAGGTGCGCGGACATTTAGGGCGACACTTAAAGACCCACAACGGCGAGAGGCCCTTCAAATGTAACGTATGCGGCGCTAAATTGAAGACCTCGCAGAATTTGAAAAAGCACATCCTAACGCACACCGATGTTAAACCGTTCCAGTGTGAGAAATGCGATTACAAGTGCAGGTACCAGGCGAGTTTAATGAAGCACTTGAtgacacacaccgacgagaggCCTTTCAAGTGTAACACCTGCGATTTTAGGTGCAGGCAAGCGGAGGTTTTAAGAGAGCACGTCTTGAGGCACACcggtgagaagccgttcagGTGCGGCAAGTGCAGTTACAGGGGCAGACAGCGCAGAAGCATGCACCTTCACTTGCTGAGCCACATCGAAAAGCCGTTCCAATGTGACGCGTGCGATTTTAAAAGCAGGACTTCGGAGATTTTAAAAAGCCACATGTTGATACACACCGACGAAAGACCGTTCAAATGCGGCAAGTGCGAATACGCCGCCAGGAAACGTGAGAACTTACGTAAACACCAGAGGGTACATAACAGCGATAAGCCGTACAAgagACGATTCACCCAGAATGACCTGGAGAATATTTTTCGTAAACGTTGCGTCATCGTTTTGACTCGCTGTGAATCAATCGAAAAAAAGCAACCCAAGAGGAAATACGAATGCGACGCTTGCGGCTACGAGTGTACCGCACTTGCAACGTTACGCAGGCATAAAAAGCAACATACCGACGAGAAACCTTTCGAATGTAACGCGtgcgattttaaatgtttaCGCCGAGGAATTTTGAAGAACCACCTTATGATACACACCGGTGAAAAGTCGTTTAGTTGTAACCAGTGCGATTATAGTAGCAATTTGCGCGAAAATTTTCGTCAACACTTGCGGATACACAGGAATGAGAAGCCTTTCGTTTTGCACACCGGTGAGAAACCGTTTAAGTGTAGCGATTGCGATTATAGGTGCAATGTGCGTGGAAATTTACGCAAACACTTGCTGATACACACCAAGGAAAAGCCTTTCAAGTTGCACACCGGTGAAAAACCGTTTAAGTGCAGCAAGTGCGATTACAGGTTCGCAGATCCTGGCCATTTACGTCGACACTTGATGATCCACAATAATGAAAAGCCTTTCAGATGTAACTTGTGTGATTATACTTGTAGAAGTTCATACTATTTGAAAGCGCACGTTTCGGCACACTCCGGCGAACAGCCGTTTAAGTGCAGCAAGTGTGATTACAAGTCTGGAATGCGCGGAAATTTACGTCAACACTTAACGATCCACGATAACGAAAAGCCTTTCAGgagACGCTTCACCCAGAAAGACCTGGAGAACATTTTTCGTAAGCGTTGCGTCATCGTTTTGAATCGCTGCGAATCAATCGAAAAACATCAAcgcaaaaacaaacacaaatgcGACACTTGCGACTACGAGTGTCGCGCACTTGCAACACTAGCCAGACACAAAAagaaacacaccggcgagaaacctttCAAATGTAACGTGTGCGATTTCGGATGCGGAAGCCCGGGAATTTTAAAGGACCACCTTgtgatacacaccggcgagaagccgttcaagtGTAACGAGTGCGATTACAGGAGCAGCGTTCGTAAAAATTTACGTCAGCACGTGCTGATGCACGCTGCGAAAAAGCGTTATCAATTGCACACCGGTGAAAAACCGTTTAAGTGTGGCAAGTGCAATTTCAAGTCCGCACAGCTTGGATCTTTAAGGCAACACGTGATGATCCACACCGATGAAAAGCCTTTCAAATGTACCACATGTAATTACACATGTAGAAGGCCAGACAGTTTGAAAGCACACATTTTCACGCACACCGGTGAAAAGCCGTTTAAGTGTAGCAAGTGCGATTACAAGTCCGTATGGCTTCATAATTTACGTCAACACTCGATGATCCACAATAATCATAAGCCTTTCGCGTGTAACGCATGTAATTATAGAGGTAGAACTTCAGAAAAGTTGAAATTACACAATTTGACGCACTCCGGCGAAAAGCCGTTTAAGTGTAGCTTGTGTGATTACAAGTCCAGAAATCGCGGAAATTTACGTAATCATTTGACGGTCCACAGAACCGAAAAGCGTTTCGCGTGTAACATATGCAACTATAGATGTAGAACTGCACAGAGTTTGAAATCACACATTTTcacgcacaccggcgaaaagccgTTTAAGTGTAGCAAGTGCGATTACAGgAGGCGCTTTACCCAGAAAGACCTGGAGAACGTTTTTCGCAAGCGTTGCGTCATCGTTCTGACTCGCTGCGAATCAATCGAAAAACGTCAACGCGAAAAGAAACACGCACTTGCAACGTCAGGCGGACATAAGGCGAAACATATTGGCGAGAAACCTTTCGAATGCAACGTATGCGATTTTAAATGTGGAGGGCCGGGAATTTTGAAGAACCACCTTCTGAGACACACCGATGAAAGACCGTTTAAGTGCACCCAGTGCGATTATAGGAGCTGTTGGCGTGGAAATTTACGTCAGCATATGCTGACACACACCAATGAAAAGCGTTTCCGATGTGACACGTGCGAATTGAAATTCAGAACGGCACAGCAATTAAAAAGACATGGCTTagtgcacaccggcgagaagccgtttagGTGTAGGAAGTGCGATTACAAGGCTTCACAGCGTGCACATTTACGTGTACACTCAATGATCCACGATAATGAAAAACCTTTCGCGTGTGACACGTGTGATTATAGAGGCAGATCTTCccagaaattgaaattacacgttttgacgcacaccggcgagaagccgttcaaaTGCGGCAAGTGCGATTACAAGTCTGCACGAGAGAGTCAGTTACGTCTGCACACGATGATCCATAATAACGAAAAGCCTTTGAGGTGTAACATATGTGGTTACAGATGTAGAATTTCATCGAATTTGAAATCACACGTgttgacgcacaccggcgagaagccgtttaaGTGTAGCCAGTGCGATTACAAGGCTGCACAGCGTTCGCATTTACGCCACCACATAATGATCCACAATAGTGAAAAGCCTTTGAGATGTAAAACATGTAGTTATAGTTGCAGAACTACATCTAGATTAAAAGTTCACAGTTTGAGGCACACCGGTGAAAAGCCGTTTAAGTGTAACAAGTGCGATTACAAGTCTGCAGCGCGTGGAAATTTACGTCTACATTTAATGATCCACAATGATGAAAAACCTTTCACATGTAAAACGTGTAGTTATAGTTGCAGAACTTCAAATAGATTAAAAATGCACAGTTTGAGGCACACCGGTGAAAAGCCGTTTAAGAGTAGCAAATGA
Protein Sequence
MKHTGEKPLKCNVCDFRSRYQQSLDKHVLTHSDEKPFKCDRCDYSCRTRSYLLRHSVLHEDKKPFKCSECDFRCKTKQGVRQHSATHTDEKPFKCIKCDYRGRSSTDLGRHVTMHTGEKPFQCNVCDRRFRISGNLKVHIATHSDETPFKCDRCDYRCKVRGDLRQHVMRHGDEKPFNCRVCGFRCKTQDSLRSHILSHTDEKPKRVARNSPEKIFRKRCVVALIRCQPPDERKQLDRQKKYRCDFCGYKCHARTILNRHIMKHTGEKPFKCTVCDFRTFHAKELKIHMLIHTGEKPFECAECDYRARTQGNLRRHLLIHTNDRPYECIACDYKSRTAQNLKNHIMTHSDEKPFKCGKCDYSCKVRGHLGRHLKTHNGERPFKCNVCGAKLKTSQNLKKHILTHTDVKPFQCEKCDYKCRYQASLMKHLMTHTDERPFKCNTCDFRCRQAEVLREHVLRHTGEKPFRCGKCSYRGRQRRSMHLHLLSHIEKPFQCDACDFKSRTSEILKSHMLIHTDERPFKCGKCEYAARKRENLRKHQRVHNSDKPYKRRFTQNDLENIFRKRCVIVLTRCESIEKKQPKRKYECDACGYECTALATLRRHKKQHTDEKPFECNACDFKCLRRGILKNHLMIHTGEKSFSCNQCDYSSNLRENFRQHLRIHRNEKPFVLHTGEKPFKCSDCDYRCNVRGNLRKHLLIHTKEKPFKLHTGEKPFKCSKCDYRFADPGHLRRHLMIHNNEKPFRCNLCDYTCRSSYYLKAHVSAHSGEQPFKCSKCDYKSGMRGNLRQHLTIHDNEKPFRRRFTQKDLENIFRKRCVIVLNRCESIEKHQRKNKHKCDTCDYECRALATLARHKKKHTGEKPFKCNVCDFGCGSPGILKDHLVIHTGEKPFKCNECDYRSSVRKNLRQHVLMHAAKKRYQLHTGEKPFKCGKCNFKSAQLGSLRQHVMIHTDEKPFKCTTCNYTCRRPDSLKAHIFTHTGEKPFKCSKCDYKSVWLHNLRQHSMIHNNHKPFACNACNYRGRTSEKLKLHNLTHSGEKPFKCSLCDYKSRNRGNLRNHLTVHRTEKRFACNICNYRCRTAQSLKSHIFTHTGEKPFKCSKCDYRRRFTQKDLENVFRKRCVIVLTRCESIEKRQREKKHALATSGGHKAKHIGEKPFECNVCDFKCGGPGILKNHLLRHTDERPFKCTQCDYRSCWRGNLRQHMLTHTNEKRFRCDTCELKFRTAQQLKRHGLVHTGEKPFRCRKCDYKASQRAHLRVHSMIHDNEKPFACDTCDYRGRSSQKLKLHVLTHTGEKPFKCGKCDYKSARESQLRLHTMIHNNEKPLRCNICGYRCRISSNLKSHVLTHTGEKPFKCSQCDYKAAQRSHLRHHIMIHNSEKPLRCKTCSYSCRTTSRLKVHSLRHTGEKPFKCNKCDYKSAARGNLRLHLMIHNDEKPFTCKTCSYSCRTSNRLKMHSLRHTGEKPFKSSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-