Pinq024441.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Prosopocoilus inquinatus
Gene Symbol
-
Assembly
GCA_036172665.1
Location
CM069876.1:49581562-49589144[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 47 0.00068 0.042 15.2 0.9 2 23 10 31 9 31 0.97
2 47 0.00086 0.053 14.9 4.0 2 23 39 60 39 60 0.98
3 47 0.11 6.9 8.3 6.6 1 23 66 88 66 88 0.98
4 47 0.00013 0.0078 17.6 3.9 1 23 94 116 94 116 0.98
5 47 2.1e-05 0.0013 20.0 2.4 1 23 123 145 123 145 0.98
6 47 0.63 40 5.9 1.5 1 23 155 177 155 177 0.97
7 47 0.019 1.2 10.7 3.3 1 23 183 205 183 205 0.98
8 47 0.083 5.2 8.7 1.4 2 23 212 233 211 233 0.96
9 47 0.078 4.9 8.8 2.4 1 23 239 261 239 261 0.95
10 47 4.6 2.9e+02 3.2 7.5 1 23 267 289 267 289 0.95
11 47 0.00045 0.028 15.8 2.3 1 23 295 317 295 317 0.98
12 47 7.5e-06 0.00047 21.4 1.3 1 23 322 344 322 344 0.97
13 47 0.023 1.4 10.4 0.8 1 23 350 372 350 372 0.97
14 47 5 3.1e+02 3.1 2.2 1 23 378 400 378 400 0.96
15 47 5.4e-05 0.0034 18.7 0.2 1 23 406 428 406 428 0.97
16 47 0.0072 0.45 12.0 0.4 1 23 434 456 434 456 0.98
17 47 0.0044 0.28 12.7 5.2 1 23 462 484 462 484 0.97
18 47 0.01 0.63 11.6 0.9 1 23 490 512 490 512 0.97
19 47 0.02 1.2 10.6 0.2 2 23 519 540 518 540 0.97
20 47 0.0067 0.42 12.1 0.9 3 23 548 569 546 569 0.94
21 47 0.0023 0.14 13.6 0.3 2 23 576 597 575 597 0.97
22 47 0.39 25 6.5 6.4 2 23 604 625 604 625 0.97
23 47 0.028 1.7 10.2 3.4 3 23 633 653 631 653 0.98
24 47 0.00026 0.016 16.6 4.2 1 23 659 681 659 681 0.98
25 47 2e-05 0.0012 20.1 3.1 1 23 687 709 687 709 0.98
26 47 0.21 13 7.4 2.3 3 23 717 737 715 737 0.96
27 47 0.0019 0.12 13.9 1.2 2 23 744 765 743 765 0.97
28 47 0.044 2.7 9.5 1.4 3 23 773 793 771 793 0.98
29 47 0.25 16 7.2 5.9 1 23 799 821 799 821 0.95
30 47 0.014 0.89 11.1 6.2 1 23 827 849 827 849 0.97
31 47 1 65 5.2 0.5 3 20 857 874 855 875 0.95
32 47 0.00012 0.0076 17.6 0.8 1 23 889 911 889 911 0.98
33 47 0.00048 0.03 15.7 0.6 2 23 918 939 917 939 0.97
34 47 0.00028 0.018 16.4 1.4 2 23 947 968 946 968 0.97
35 47 0.21 13 7.4 6.8 1 23 974 996 974 996 0.98
36 47 0.00089 0.056 14.9 4.8 1 23 1002 1024 1002 1024 0.98
37 47 6.9e-05 0.0043 18.4 2.4 1 23 1030 1052 1030 1052 0.98
38 47 1 63 5.3 6.0 1 23 1058 1080 1058 1080 0.96
39 47 0.57 36 6.0 0.5 3 23 1092 1112 1090 1112 0.95
40 47 0.019 1.2 10.7 1.5 1 23 1118 1140 1118 1140 0.98
41 47 0.00085 0.053 14.9 2.3 1 23 1146 1168 1146 1168 0.98
42 47 0.066 4.1 9.0 5.1 1 23 1174 1196 1174 1196 0.95
43 47 0.32 20 6.8 4.4 1 23 1202 1224 1202 1224 0.98
44 47 0.00015 0.0093 17.3 0.5 2 23 1232 1253 1231 1253 0.96
45 47 0.0042 0.26 12.7 1.4 3 23 1261 1281 1259 1281 0.97
46 47 0.002 0.12 13.8 0.7 1 23 1287 1309 1287 1309 0.98
47 47 0.0032 0.2 13.1 1.4 1 23 1315 1338 1315 1338 0.96

Sequence Information

Coding Sequence
AtgacacacaccgacgagaagctaTTGAAGTGCACCGTCTGCAACAGCGAGTTTCGGCGCGCCGGTTTCCTGTCACGCCACATGCTCAAACACACCCAAGGAACTTCACCCCCCAAATGTGACGTCTGCGGTTACGAATGCAGCACGCGTCACAATTTGAAATACCACTTGATAACGCACacggacgagaagccgttccgCTGCAAACTTTGCGATTACAGGTGCCGAGTTGCCAaaaatttgaagtgtcacatgctaacgcacaccgacgaaaCGCCGTACTCCTGCGAGCTCTGCGGTTGCAAATTCAAACGACTCTCGTATTTGAAGCGACACGCGTtgaagcacaccgacgagacGAGACGATTCAGATGCACTCAATGCGATCGCAAATTCCGCAACGCCTACAGCCTGAAACTTCACGTAATGAGGCACACAGGCGAAAAACCTGACGAGAAGCCCTACGCTTGCGATCtatgcgattacaaatgccgagcAGGTGTATCCTTGAGACAGCATAAGCTAAAACACACCGGTGATAAACCTTTTCACTGCGCGATTTGCAATTACAAGTGCGTATACAAAAGAAACTTGGTGGTGCACGTGTTAACGCACAGCGACGAAAAACCATTAAgttgcgacctttgcgattataaatgcgtACAAGCCGGTCGTTTGAAGCTGCACAGGTTGAGACACAGCGGTGAAAAGCCTTTTGCTTGCGATCTCTGTGATTACAAGTGCCGGCAGCGAAACTCTTTGGCACTGCATAAGGTCAAACACACTGGTGATAAACCGTTTTGTTGTAAGATTTGCAATGTCAAGTGCCTACACGAGAGCAGCTTAAAAAAGCACACGTTGATACACACCGGCAAGAAACTATTCAGTTGTGATCTATGCGATCACAAATCCCGAAGCAAGGAATTACTGAAGCGGCACATGTTGGTACACGGCGAGAAATCATTCGCTTGTGGCCTCTGCGGTTACAAATTCCGAAACAAACAATACCTCAAACGACACATGTCAGTGCACGCGGGCGAAAAGCCATTCAGTTGTGACGCTTGCGATTACAAAACCGTAGACTCCGGAAACTATATGCgacacaagttaaagcacaccgGCGAAAAGCATTTCGCTTGCGACCTTTGTGATTACGCGTGCCTCAGGAAAGAACGCATGAAACAGCACAGGCTGAGCCACTCCGGTGACAAGCCGTTTGTTTGTAGGATTTGCGACGCCGAATTTCCGAGAAGAATGAATCTGAAGCGGCACATTTTattacacaccggcgagaaactgttcagttgtgatctgtgcGAGTACGAAACCCCGGACGCCGGGAACTACAAGAGACACCGATTGAAACATACCGACGCGAAGCCTTTCGCCTGCGACCTTTGCGACTATAAATGCCGAAGGAATGAACACCTGAAAGAGCATCGGTTGAGACACGCCGGCGGCAAACTGTTTAATTGTAAGACTTGCGGCGACATATTTCCGAGAAGATTAAGTTTGCAGCGGCATAGTTTAACACACGCCGGTGAAAACCTACtcagctgtgatctttgcgattacagagCCGTAAAGGCGACGTATTTGAAACAGCACATTTTAAcacataccggcgagaagcctatcgcttgcgatctttgcgattataaatgccgaaagAACGGATATTTAAAGAGACACGTCATCGTGTCACACATCGGCGAGAAGCTATTGAAGTGCACCGTCTGTGACAGCGAGTTTCAGCGGGCCGGCTTCCTGGCACGACACATGCTCAAACACACCCAGGGAACATCACCGAAATGCGCCATCTGCGGTTACGAATGTACAACGCGGCATAATTTGAAGTGTCACGTACtaacacacaccggcgagaagccgttcggctgCAATCTTTGCGATTTCAGGTGCCGCGTTGCCAGAAATCTCAGGCGTCACAAGCTAACGCACGCCAAAGATAAGCCGTACTCCTGCGATCTCTGCAGTCGCAAATTCAAGCTACCTCATTACTTAAAACGACACATGTTGAAGCACACCGACGAGGAACGGTTCAGATGCACTCACTGCGATCGCAAATTTCGCAACGCCTACAGCCTGAACGTTCATGTAATAAAGCACAAGGGCGAGAAGCCTCTCGCTTGCAATctgtgcgattacaagtgccgggCAAGAGAATCCTTGAGACTGCACAAGCTAAAACACACCGGCGATAAGCTTCTTCGCTGCGAGATTTGCAATTACAAGTGCGTGTACAAGAGGAACCTGGCGGTGCACGTCTTGACGCACAGCGACGAAAAACCATTCGgttgtgacctctgcgattataagtgcgcGCAAGCCGGACGCTTGAAACAGCACAGGTTGACGCACGGCGGCGAGAAGCCTTTCGCCTGCGACctgtgcgattacaagtgccggcGGAGAGACTGCTTGAGACTCCACAAGGTGAAACACACCGGGGATAAACCGTTTTGTTGTAAGATTTGCGACGTCAAGTGCCCGCACGAGAGGAGCTTGAAAAAGCACATgctgatacacaccggcgagaaaccgttcggttgtgacgtttgcgattataaaacCGTAAAGGGGACGAATTTGAAAAAACACAGatttGAATGGACGCCCAAGTCCGAACCTGCACAGGAAAGTGCATTTGAATGTCGCGTTTGCAGTTCTGTATTTAAAACTCAGGGGTATTTAAACAGACATGTGATGACACACGCCGACGAGAAGCTATTGAAGTGCACTGTTTGCAACAGCGAATTTCGGCGCGCCGGCTTCCTGGCACGCCACATGCTCAAACACACCCAAGGAACTTCGCAGCTGAAATGTGACGTCTGCGGTTACGAATGTGACACGCGTCAAAATTTGAACAAGCACGTactaacacacaccgacgagaaaccgttctgCTGCAACCTCTGCGATTACAGCTGCCGAGTCGCCGAAAACCTAAAGTGCCACatgttaacgcacaccgacgacaGGCCGTACTCCTGCGTTCTCTGCAACTGCAAGTTCAAACGACTCCCCTACCTAAAGCGGCACATGCagaagcacaccgacgagaaacggTTCAGGTGTGCTCACTGCGATCGCAAATTCCGCAACGCGTACGGCTTGAAGCTTCACGTGATGAGGCACACGGGCGAGAACCGTTTTCACTGCGCGATCTGCGATTTTCAGTGTCGATACAAGGTGACCTTGAAACAGCACGTGTTTAAGCACACGGGCGGGAAACCGGACGAGAAGCGTCTGGCTTGCGACctgtgcgattacaaatgccgagcGGGCGATGCTTTGAGAGCGCATAAGCtgaaacacaccggcgagaagcctttTAGCTGCGCGATTTGCAGTTTCAAGTGCATATACAAGAAAAACCTGGCGGTGCACGTCTTGACGCACGGCGACgaaaagccgttcagttgtgacctctgcgattataaatgcgtGCAAGCCGGAAGCTTGAAGCGGCACAGGTTGAGACACAGCGGCGAGAAGCCTTTtgcttgcgatctttgcgattacaggtGCCGGCATAGAGATTCTTTGAAACTGCATAAGGTGAAACACACCGGTGGtaaaccgtttagttgtaaGATTTGCAACGTCGCGTGCCTGCACGAGAAGAGCCTGAAAACGCACATGTTAAAACACCTGACCGGCAAAAACCTTTTGAGTTGTGAACTTTGCGGTTACAAATCCCGAAGCAAAGAATTATTAAGACGGCACATGTTGGTgcacaccggcgaaaaaccgttcggttgtaacctttgcgattacaaatccCGCAGCAAAGAATCATTGAAGCGGCACACGTCggtgcacaccggcgagaaaccatTCAGCTGTGAACTTTGCGATTACCAAAGCGTGGACTCCGGAAACTATAAGAGACACTTGTTAAaacataccggcgagaagcctttcgcctgcgatctttgcgattacaaaagcCGGAAGAACGCGAGCTTGAAAAAACACAGGCTAACAACACATCAACGAGAAGGCATTTGA
Protein Sequence
MTHTDEKLLKCTVCNSEFRRAGFLSRHMLKHTQGTSPPKCDVCGYECSTRHNLKYHLITHTDEKPFRCKLCDYRCRVAKNLKCHMLTHTDETPYSCELCGCKFKRLSYLKRHALKHTDETRRFRCTQCDRKFRNAYSLKLHVMRHTGEKPDEKPYACDLCDYKCRAGVSLRQHKLKHTGDKPFHCAICNYKCVYKRNLVVHVLTHSDEKPLSCDLCDYKCVQAGRLKLHRLRHSGEKPFACDLCDYKCRQRNSLALHKVKHTGDKPFCCKICNVKCLHESSLKKHTLIHTGKKLFSCDLCDHKSRSKELLKRHMLVHGEKSFACGLCGYKFRNKQYLKRHMSVHAGEKPFSCDACDYKTVDSGNYMRHKLKHTGEKHFACDLCDYACLRKERMKQHRLSHSGDKPFVCRICDAEFPRRMNLKRHILLHTGEKLFSCDLCEYETPDAGNYKRHRLKHTDAKPFACDLCDYKCRRNEHLKEHRLRHAGGKLFNCKTCGDIFPRRLSLQRHSLTHAGENLLSCDLCDYRAVKATYLKQHILTHTGEKPIACDLCDYKCRKNGYLKRHVIVSHIGEKLLKCTVCDSEFQRAGFLARHMLKHTQGTSPKCAICGYECTTRHNLKCHVLTHTGEKPFGCNLCDFRCRVARNLRRHKLTHAKDKPYSCDLCSRKFKLPHYLKRHMLKHTDEERFRCTHCDRKFRNAYSLNVHVIKHKGEKPLACNLCDYKCRARESLRLHKLKHTGDKLLRCEICNYKCVYKRNLAVHVLTHSDEKPFGCDLCDYKCAQAGRLKQHRLTHGGEKPFACDLCDYKCRRRDCLRLHKVKHTGDKPFCCKICDVKCPHERSLKKHMLIHTGEKPFGCDVCDYKTVKGTNLKKHRFEWTPKSEPAQESAFECRVCSSVFKTQGYLNRHVMTHADEKLLKCTVCNSEFRRAGFLARHMLKHTQGTSQLKCDVCGYECDTRQNLNKHVLTHTDEKPFCCNLCDYSCRVAENLKCHMLTHTDDRPYSCVLCNCKFKRLPYLKRHMQKHTDEKRFRCAHCDRKFRNAYGLKLHVMRHTGENRFHCAICDFQCRYKVTLKQHVFKHTGGKPDEKRLACDLCDYKCRAGDALRAHKLKHTGEKPFSCAICSFKCIYKKNLAVHVLTHGDEKPFSCDLCDYKCVQAGSLKRHRLRHSGEKPFACDLCDYRCRHRDSLKLHKVKHTGGKPFSCKICNVACLHEKSLKTHMLKHLTGKNLLSCELCGYKSRSKELLRRHMLVHTGEKPFGCNLCDYKSRSKESLKRHTSVHTGEKPFSCELCDYQSVDSGNYKRHLLKHTGEKPFACDLCDYKSRKNASLKKHRLTTHQREGI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-