Pinq024585.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Prosopocoilus inquinatus
Gene Symbol
-
Assembly
GCA_036172665.1
Location
CM069876.1:51095494-51103332[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 35 0.013 0.81 11.2 0.3 2 23 63 84 62 84 0.95
2 35 0.0076 0.47 11.9 0.6 2 23 91 112 90 112 0.97
3 35 0.011 0.72 11.4 1.4 1 20 118 137 118 141 0.94
4 35 0.00062 0.039 15.4 3.0 1 23 147 169 147 169 0.98
5 35 3.4e-05 0.0021 19.3 0.8 1 23 175 197 175 197 0.99
6 35 0.00036 0.022 16.1 1.6 1 23 203 225 203 225 0.98
7 35 5.4e-05 0.0034 18.7 2.1 1 23 231 253 231 253 0.99
8 35 0.0005 0.031 15.7 2.3 1 23 259 281 259 281 0.98
9 35 0.00031 0.02 16.3 1.4 1 23 287 309 287 309 0.98
10 35 0.0012 0.077 14.4 1.7 1 23 315 337 315 337 0.96
11 35 0.23 15 7.3 5.9 1 23 373 395 373 395 0.97
12 35 0.0025 0.16 13.5 1.2 1 23 401 423 401 423 0.98
13 35 0.00035 0.022 16.2 2.7 1 23 429 451 429 451 0.99
14 35 0.0021 0.13 13.7 2.3 1 23 457 479 457 479 0.98
15 35 6e-05 0.0037 18.6 2.5 1 23 485 507 485 507 0.98
16 35 0.0017 0.1 14.0 1.3 1 23 513 535 513 535 0.96
17 35 0.061 3.8 9.1 3.3 1 23 541 563 541 563 0.99
18 35 5.2e-05 0.0033 18.7 1.4 1 23 569 591 569 591 0.95
19 35 0.0011 0.071 14.5 2.1 1 23 597 619 597 620 0.96
20 35 0.14 8.9 7.9 0.7 1 19 655 673 655 675 0.96
21 35 0.013 0.81 11.2 4.6 1 23 683 705 683 705 0.98
22 35 0.0037 0.23 12.9 1.6 1 20 711 730 711 733 0.95
23 35 6.3e-05 0.0039 18.5 5.5 1 23 739 761 739 761 0.99
24 35 0.0056 0.35 12.4 1.4 1 23 767 789 767 789 0.98
25 35 0.023 1.4 10.4 1.1 1 23 795 817 795 817 0.98
26 35 8.2e-05 0.0051 18.1 3.4 1 23 823 845 823 845 0.97
27 35 8.1e-06 0.0005 21.3 1.6 1 23 905 927 905 927 0.98
28 35 6e-07 3.8e-05 24.8 1.2 1 23 933 955 933 955 0.99
29 35 0.003 0.19 13.2 2.4 1 23 961 983 961 983 0.98
30 35 0.0049 0.3 12.6 0.2 1 23 989 1011 989 1011 0.97
31 35 0.0019 0.12 13.9 1.7 1 23 1017 1039 1017 1039 0.99
32 35 0.06 3.8 9.1 0.3 1 23 1045 1067 1045 1067 0.98
33 35 0.00091 0.057 14.8 2.1 1 23 1073 1095 1073 1095 0.98
34 35 0.0011 0.067 14.6 1.6 3 23 1103 1123 1101 1123 0.98
35 35 1.6e-05 0.001 20.3 1.8 1 23 1129 1151 1129 1151 0.98

Sequence Information

Coding Sequence
ATGGAACGTACAAGAAAATTCTTGAAGGTAAGTAATGAAAAGCTAATGAAAGTATCTTCAAGGATCCACCGCGTCGATTATTTTCTTGAACCGCACCCGTCGGAGGAAGAAGGCGAGAAACGACTAGAATGGCGCTTATGCGATTGCAAAACTAATTTAAACCAGCACACCGACGAAAAGCCACTGAAGTGCAACGCCTgcgatgagagatacaaatatCCCAGGAGTCTGAGAGAACACGCGGTGACACACATGGGCGATAAGCAGATCAAATGCGCGCTCTGCGATTTCGAGTGCGCGCGGGCCAGAAGCTTAAAGATCCACATGGGGACGCACAGCGACGAAAAGCCGTTTCAATGCGCGACGTGCGGCTGTCAGTTTCGCCAGGCCAGAGGCTTGAGAGCGCACACGTGGCGGACGCACAGCGGCGAAAGGCCGTTCAAGTGCAACGTGTGCGAATACGCGTGCAATAATTCTCAGTATTTGAAAGAGCACATGTTGAAGCACACCGGCGACAAGCCGTTTAAATGCGCGACGTGCGCCAGCCGATTCAACCGAGCCGCAAACCTAAAGCGTCACATGAGGATACACGCCGACGAAAGGCCGTTCAAgtgcgacctctgcgattacgAGTGCAACAGCTCCGGATCCCTAAAAGCGCACTTGTTGAAGCACGCCGACGATAGGGCGTTCAAATGTACGATCTGCGGTTATCGATTTCACCTGGCCGGAACCCTGAAGCAGCACATGAAGATACACGGCGAAGAGAGGCCGTTCAAGTGTAACCTCTGCGAGTACGGATGCAACAGTTCTGGGTCATTAAAGGCGCACATGTTCACGCACGCCGGCGATAAGCCGTTTAAGTGCGAGCTTTGCGACTTTCAGAGCGACCGGCGTTCGAATTTGAAGAGGCACGCGTTGACGCATACCGACGAAAATCCGTTCGCCTGCGACGTCTGTGACTTCAAGTGCAAACAGTCCGGGAGTTTGAAGCGACATGTGTTGCTACATAATAGAGAGAAGTTTTTGAAATGCGACGTTTGTGATTACGAaaacgaTGATGACTGTGGGTTGTATAAATCACGAGGGCCAATGGACGTAGGGGGTGAAAAGCTATTCAGATGTCACTTATGTCATTTCGCGAGCAATTACCGCAGGAGCTTGCGCCGACACGTGGTGCGCCACagcgacgagaaaccgttcgaatgcgacctctgcgattacagATGCAAGCTCCCCACCAGCTTAAAAGAACACCTGGCGACGCACACCGGCGATAAGCCGTTTAAATGCGCGACTTGCGGTTACGAGTGCGTCCGATCCAACAACATGAAAACGCACATGCTGACGCACAGCCTCGAAAGGCCGTTCAAGTGCAACCTGTGCGAATACCGATGCAACATCAAGGGGGCCTTGACGAAGCACATGCTGATGCACACCGGCGATAAGCCGTTCAAATGTATGGCGTGCGGTTGTCGATTTCGCCGGTCCGGGAACCTGAAGGAGCACCTGAGGATCCACAGCGACGAAAGGCCGTTTAAGTGCGACCTCTGCGAGTACGGCTGCAATAATTCCGAGTCGCTGAGGGCGCACATGTTTGCGCACACCGGCGACGAGCCGTTCAAGTGCGAGTTTTGCGATCACAGGAGCAGGTGGCCTAGGAATTTGAGGACGCATCAGTTGACGCATAACGACGATAGGCCGTTCGAATGCGACGTTTGCGGTTATAAGTGCAAGCAGTCCGGAACATTGAAACGGCATATGGTGGCACACAACAGCGAAAAGCCTTACAAATGCGACAGCTGCGATTACAAATCGACGCGAGCCGGAGATGTGAAAAGACATGCGCGAACGCATCAcaAAAATGAGAAATCTAGTCCCAATAGTAAACAAGTGACAGATGATTGCATCTCATTTAAACCGTCAAACGTATGCCTATCGAAGGACGGGGGTAAAAAAACATACAGATGCGATTTGTGTAATTTCACGAGTGATTACCGGAGGAGCCTGGAAAGGCACAAGGTGTGCCACACCGACGAAAGACCGTTCAAGTGTCACCTCTGCGATTACAGTTGTAAATTCCCCGCCAGGCTACAAGAGCACCTGTCGAGTCACCGCGATGCCAAGCTGTACAAATGCGCGACCTGCGATTACGAGTGCGTCCGCGTGAAAAACTTGAAAAGGCATATGTGGATACATGCCGACGAAAAACCGTTCAAATGTCCGACGTGCAGTTGCCACTTCCGCCGAGCCGCGTACTTGAAGCAGCACATGCGGATACACGGCGTCGAAAGGAAATTCAAGTGCACCCTCTGCGAGTACGGATGCAATTTTCCGCAATCTCTCGTGGCGCACATGCTcaagcacaccggcgagaagccgttcaagtGCGAACTGTGCGACTATCAGAGCAAGTGGCAGAAGAATTTGAAATCGCATCTGgcgacgcacaccgacgagtaCCCGTTTGAATGCAACGTCTGCAGTTACAAGTGTAAGCGCGCCGAGAACTTGAAGCGGCACATGTTCGTACACAACAGCGAAAAGCCTCTCAAGTGTGAAGTTTGCGAATACAGGAAGTTTAGTGGCGGCGAAAGTCTAAATGAGGGCGAATCGGAGCACGAGGAGCCATTACGCAATACCACAATAATTAACGATCGACATGACGTGCGCCGTACCGACGAGAATCCTTCAAAGCCTAGCGACAAGCCGTTCAAATGCACGATTTGCAATCACGAGTTTGCCCACGCCGGCAACTTAAAAAGACACATAGCGATACACAGCGACGAAAGGCCCTTTAAATGTAAGACGTGCGGTTATCGATTTCGCCGAGCCGGAAACTTGAAAGAGCACGTGAGGATACATGCCGACGAAAGGCCGTTCAAGTGCAACCTCTGCGAGTACGGATGCAACAAGTCTCAATCTTTGAAAGCGCACATGCTGCTGCACACCGGCGATAAGCCTTTTCAATGTATAATATGCGGCGGTCGCTTTCGCCTACTCGGAAGCTTGAAACTACACATGAGGATACACGGCGAGGAGAAGACGTTTAAGTGCGATCTCTGCGAATACGGAACCAATCACTCGCAATCCCTGACGGCGCACCAGCTCACGCACACCAGCGAGAAGCTCTTCGAATGTGAATTGTGCGACTTTGAAACCAACTGGCCTAGAAATTTGAAAACGCACCTGCTGACACACAAGGACGATAAGCCGTTTAAGTGCGAGTTCTGCGACTATCGAGGTAAGCGGCGGCAAAATCTGCAGTCGCATTTGTTGTCGCATAACGACGAGAGCCCGTTCGGATGCGACGTTTGCGATTTTAAGTGTAAGCAGCCGACCAGTTTGAAGCAACACATGCTGGTTCATAATAACGAAAGGTCTTTCAAATGTGACGTCTGCGACTATGCGACGAGGAGAGCGCACGACTTAAAGAAACACATGATCAGGCATCGATGA
Protein Sequence
MERTRKFLKVSNEKLMKVSSRIHRVDYFLEPHPSEEEGEKRLEWRLCDCKTNLNQHTDEKPLKCNACDERYKYPRSLREHAVTHMGDKQIKCALCDFECARARSLKIHMGTHSDEKPFQCATCGCQFRQARGLRAHTWRTHSGERPFKCNVCEYACNNSQYLKEHMLKHTGDKPFKCATCASRFNRAANLKRHMRIHADERPFKCDLCDYECNSSGSLKAHLLKHADDRAFKCTICGYRFHLAGTLKQHMKIHGEERPFKCNLCEYGCNSSGSLKAHMFTHAGDKPFKCELCDFQSDRRSNLKRHALTHTDENPFACDVCDFKCKQSGSLKRHVLLHNREKFLKCDVCDYENDDDCGLYKSRGPMDVGGEKLFRCHLCHFASNYRRSLRRHVVRHSDEKPFECDLCDYRCKLPTSLKEHLATHTGDKPFKCATCGYECVRSNNMKTHMLTHSLERPFKCNLCEYRCNIKGALTKHMLMHTGDKPFKCMACGCRFRRSGNLKEHLRIHSDERPFKCDLCEYGCNNSESLRAHMFAHTGDEPFKCEFCDHRSRWPRNLRTHQLTHNDDRPFECDVCGYKCKQSGTLKRHMVAHNSEKPYKCDSCDYKSTRAGDVKRHARTHHKNEKSSPNSKQVTDDCISFKPSNVCLSKDGGKKTYRCDLCNFTSDYRRSLERHKVCHTDERPFKCHLCDYSCKFPARLQEHLSSHRDAKLYKCATCDYECVRVKNLKRHMWIHADEKPFKCPTCSCHFRRAAYLKQHMRIHGVERKFKCTLCEYGCNFPQSLVAHMLKHTGEKPFKCELCDYQSKWQKNLKSHLATHTDEYPFECNVCSYKCKRAENLKRHMFVHNSEKPLKCEVCEYRKFSGGESLNEGESEHEEPLRNTTIINDRHDVRRTDENPSKPSDKPFKCTICNHEFAHAGNLKRHIAIHSDERPFKCKTCGYRFRRAGNLKEHVRIHADERPFKCNLCEYGCNKSQSLKAHMLLHTGDKPFQCIICGGRFRLLGSLKLHMRIHGEEKTFKCDLCEYGTNHSQSLTAHQLTHTSEKLFECELCDFETNWPRNLKTHLLTHKDDKPFKCEFCDYRGKRRQNLQSHLLSHNDESPFGCDVCDFKCKQPTSLKQHMLVHNNERSFKCDVCDYATRRAHDLKKHMIRHR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-