Pinq024429.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Prosopocoilus inquinatus
Gene Symbol
Znf516
Assembly
GCA_036172665.1
Location
CM069876.1:49529178-49538635[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 40 0.0046 0.29 12.6 4.8 1 23 57 79 57 79 0.98
2 40 0.0027 0.17 13.3 2.1 2 23 86 107 85 107 0.97
3 40 0.019 1.2 10.7 2.8 2 23 119 140 118 140 0.96
4 40 0.00024 0.015 16.7 1.4 1 23 144 166 144 166 0.98
5 40 0.00096 0.06 14.8 1.0 1 23 172 194 172 194 0.99
6 40 0.034 2.1 9.9 0.4 1 23 200 222 200 222 0.98
7 40 0.0016 0.099 14.1 1.7 2 23 229 250 228 250 0.97
8 40 1.2e-05 0.00075 20.8 1.2 1 23 256 278 256 278 0.98
9 40 0.032 2 10.0 2.3 1 23 284 307 284 307 0.95
10 40 8.1e-05 0.005 18.2 1.7 1 23 329 351 329 351 0.99
11 40 0.00075 0.047 15.1 3.5 1 23 357 379 357 379 0.96
12 40 0.00011 0.0071 17.7 3.3 1 23 389 411 389 411 0.98
13 40 0.00015 0.0095 17.3 1.9 1 23 423 445 423 445 0.99
14 40 0.033 2.1 9.9 4.7 1 23 451 474 451 475 0.96
15 40 0.00022 0.014 16.8 0.9 1 23 485 507 485 507 0.97
16 40 0.0031 0.2 13.1 5.5 1 23 512 534 512 534 0.97
17 40 0.003 0.18 13.2 1.4 1 23 547 569 547 569 0.97
18 40 0.0012 0.075 14.5 1.8 1 23 588 610 588 610 0.98
19 40 0.0028 0.18 13.3 3.1 1 23 616 638 616 638 0.96
20 40 0.0014 0.09 14.2 1.4 1 23 651 673 651 673 0.98
21 40 1.1 70 5.1 0.5 1 23 679 701 679 701 0.95
22 40 0.00016 0.0098 17.2 0.8 1 23 707 729 707 729 0.95
23 40 0.0025 0.15 13.5 1.0 1 23 735 757 735 757 0.98
24 40 0.013 0.79 11.2 3.7 3 23 765 785 763 785 0.98
25 40 8.8e-05 0.0055 18.0 3.1 1 23 791 813 791 813 0.97
26 40 0.0033 0.21 13.1 3.7 1 23 819 842 819 842 0.96
27 40 0.0034 0.21 13.0 2.4 1 23 945 967 945 967 0.98
28 40 2.9e-06 0.00018 22.7 1.3 1 23 971 993 971 993 0.99
29 40 0.00073 0.046 15.1 0.5 1 23 999 1021 999 1021 0.99
30 40 0.04 2.5 9.7 0.5 1 23 1027 1049 1027 1049 0.97
31 40 0.00027 0.017 16.5 5.1 1 23 1055 1077 1055 1077 0.99
32 40 0.0027 0.17 13.4 0.0 1 23 1083 1105 1083 1105 0.98
33 40 0.012 0.76 11.3 0.2 1 23 1111 1134 1111 1134 0.96
34 40 0.00043 0.027 15.9 2.1 2 23 1182 1203 1181 1203 0.96
35 40 0.027 1.7 10.2 2.2 1 23 1214 1236 1214 1236 0.97
36 40 0.00062 0.039 15.4 2.8 1 23 1240 1262 1240 1262 0.98
37 40 0.27 17 7.0 0.2 1 23 1268 1290 1268 1290 0.97
38 40 0.0012 0.074 14.5 0.1 1 23 1296 1318 1296 1318 0.97
39 40 0.0011 0.071 14.5 3.8 1 23 1324 1346 1324 1346 0.99
40 40 3.1e-05 0.002 19.4 0.1 1 23 1353 1375 1353 1375 0.96

Sequence Information

Coding Sequence
ATGTCTGGGAGACCTAGGATATCTGGGATACCTAGGATGTCTGGTATACCTAGGATGTCAGGGATATCTAGGATATGCGAATGCATTGTCGACGGCGAAAGCGCGCTCCCATTCGACGAGATCGAAACAAAAACGCAAACGAGGAAAGGCCGCCGCCTCGACAAACGCTTCAAATGCGAACACTGCGATTACGTCTCCCATCGTTCCGACACCCTCAAGAAGCACGCCCTGAGACATACCGATAGAAATCCGCTCGTTTGCCAGCTGTGCCAACAGAAATACATCAGCACCACGACTTTGAAAAAACACATGAAGAAACACGCCGCCATGGAAGTGCAAAAACCCCCCAAACTCACTTGCGAAACTTGCGATTTTAAAACAGAGAGAGCTGAACATTTTAAGAGACACCTCGAGAAGCACGTGAGGTCGCACCAGTGCGACCGCTGCGGCGACGCTTTCACCACGCTCGCCACTTTGAAGCTGCACATGAGGCgacataccggcgagaaaccgtacaAGTGCaccctttgcgattataaaggcGCCCAGTCCTGTCAGCTCGCGGCGCACATGAAGATACACAGCGGCGCGAAGCCCTTTCAATGCAGCAAGTGCGATTACAGGGCCGCCCTTAAGGGCAGCGTCACCAAACACATGGTCATGCACTCGACGGAGAAGCCCGTCAAGTGTAACATTTGCGGTTTCGAAACGAAAACCATCAAACACTTGAAAAACCACCTGAatatacacaccggcgagaaggcGTTCGAATGCAGCGTCTGCTCTAAACGATTCAGCAATTCCAAAGACATCAAAAGGCACATGTTGGTACATACAGGGGAGAAACCGTTCGCGTGCACTCTGTGCGATTACAGAGCCACCCAGGGGACTAATTTAAAATCGCACATGAAACACAGGCACAAacaGTCGGCTAACCTCGACGACGTGCCCCTGAGTATTAGAAAGGGCGACCTCCAGCGGCGTTTCAAATGCGAACGCTGCGATTTCGCGACGACTCGCGCCGACACTCTCCGAAAGCACCTGCGgagacacaccggcgagaaaccgcaCGCGTGTCAGCTGTGCGACTACAAGTGCACCAACCCGGGGAACCTCAAGAGGCACAAGATGGTGCACGAAGCGAAAGAGGGGGCCGAGTCCAATTTCACGTGTGAGAAGTGCGGTTTTAAGACGACGCAATCCGATTATCTGAGGAAGCACTTGAAGAGGCACGGCGAGCCTAAGCCGGGGGCCGACAGCTTGAAGTACAAGTGTCAGTACTGCGATTATAGGGCGAGTCGCCTCAACAGTCTCAAGCGGCATATCTTgagacacaccggcgagaaaccgtacgAATGTAAATTCTGCGAGTACAAATGCACCATGTCGGGAAACCTCGATAGGCACTTGAGGGCGCGCCACCATGCGGAGTTAGCCGAAGGCGGATGCGAGTTCGCGTGCGATCTCTGCGGTTTTAGAACGACGCAAGCCGACTACTTGAGGAAGCACCTGAAAAGACACGGCGAACACCAGTTCGCTTGTCacctctgcgattacaagtgcacCCAATCGGCGAGCTTCAGGAGGCACATGGTGAAGCACGAGGTCAAAGAAAAAGGCGAGGAATTCGAGTTTGAATTCGCCTGTAACGTTTGCAGCTTCAAAACAACCGAAGCTAGTTATCTGAGCAAGCACATGAAGCGACACGCCGACGAGAAGCAATCGTCGCCGAAGCACTCATCGCCGTCGGATTGCGTGTGGCACAAGTGCGACCGTTGCGATTACGCTTCGATTCGCGCCGCCACTCTCAGGAAGCACATGTTCACCCACACCGGCGAAAAACCGTTCGCGTGCAAACAGTGCAGTTTCACTTGCAGCACGTCCGGAAATCTCCGGAGGCACTCGCTGGTGCACATGGCGAAAGAGAAAGTCCAGGAGGCCGATAAGAAATTCATGTGCGACGTCTGCAGTTTTAAAACCAGGACGGCCAGGTATCTGAGGAAGCACATGCTGGTACACagcggcgagaagccgttccaGTGCGATCGCTGCGGCGACAAGTTCGCCTCGAGCGTCATCTTGAAAATGCACAACATGCGACACACCGGGGAAAAACCGTACGCGTGCAACATCTGCGGCTACAAGTGCAGCCAGAGCGGCGGACTGAAGCGTCACCTTGTGCTGCACACCGGCATTAAAACGTTCCAGTGCCCCCACTGCGATTACAAGGCGGCCTTGAAGGGCACGCTCACGAAACACCTGGCGAAACATTCCTCGGAGAAACCGTTCGGGTGTCACCTTTGCAACTACAGGGCGAAAACGGCCAAGCACCTGAAAAATCACATCATCACGCACACCGGCGAGCGGATACACAAATGCGACATTTGCGATAAGAGATTCACGCTTTACAGGGGCCTGAAACGACACATGTACGTACACACGGGCGAAAAGCCGTACGCGTGCAAATTTTGCGATTACAGATCCACGCAGCAGTCGAACGTGAAAGTGCACATGAAACACAGACATAAGGAGTTTCAGTTCGACGAAGCTGGCGCAAAGAAAGATATCCCatttcTTGCACTGAGCTTCGGCACGTTTGAAGAAGAGAGCGGGGGCGTCTCACCCCCCACAATAAAAAAACCAACAGGAGCTACGGTGGCGCCCCTTAATTGTGAAAGTTTTGATTTCAACTCTGACAGTTCCAACGCCGTGAAGGAACGCGTTCTAACTCACGCGAGCGGAAACCCGTTTGCATGCTTGAAATACGGGCAGACCAAAAATGCAGAACGTCACGTGATGAAGGGGCGCGCGGACGTCAAAAATCTTCAGCAATTCGTGTGCGGGGTTTGCGGTTTTAGAACGCACCAAACCCGCAACCTGAAGAGACACGTCAACACGCACGAGAGGGCCTACCAGTGCGATCGCTGCGGTAATACCTTCACCTCGCTGCCCAATTTAAAATCGCACATGAGGcgacacaccggcgagaaaccgtacaAGTGCGGCGTTTGCGATTACAAGAGCGCCCAGGCCTGCGACCTCTCCGCGCACATGAAGGTGCACACCGGCGCGCGGCCTTTTCACTGCGACAAGTGCGATTACAAGGCCGCCCTGAAAGGCACCCTCGCCAGGCACATGGTCATACACTCGCCGGAAAAGCCGTTCAAGTGTAACGTGTGCAGTTACGAGACGAAAACCGCCAAGCATTTGAAGCGGCATACGAGgacgcacaccggcgaaaagGCCTACGAATGTGGCGTTTGCGCTAAAGGACTGGCCGACTCGAAAAGCCTGAAGAGGCATCTGTTGATACACGCGGGGGAAAAACCGTTTGCGTGCGGTCTGTGCGATTATAGATCGATTGAACCGTCAAACGTGAAAGTACATATGAGATACAAACATAAGGAGTGTAACGCTAATGAAGTTACTCCGAGTAAAAACGCgttAAGTCCCGGCGCTTTCGCCGATCACGAAACAATTTTGACAGTCCGGACGAATCAATTGTTTAAATGCGAACCCGATGCTATAAACGAACACGTTTTGATATGTCAAATATGTGACTTGAAATGTAGAACATCGCCAGGTTTAAAACGTCACATGAAGAAGCACGACTCGCCCCACACCGATGGAAAACAATCGCACGTCTGCGAGATCTGCGGTTTTAAAACGGACGCAGCCAGACACCTCAAGAGCCACCTGCAAAGACACGAGAGGTCCTATCAGTGCGACCGCTGCGGCCATAAGTCGACGACGCTCCAGAACTTGAAGTCGCACATGGCGCGGCATACCGGCGAAAAGCCGTTCAAATGCGACgcttgcgattataagtgcgcGCTGGTCAGCGATCTCGCGGCGCACGCCAAGCTACACACCGGCGTGAAGCCCTTCCGGTGCGACAAGTGCGATTACAGGGCGGCGGTGAAGAGCAACCTGGCGAATCACATGGCCGCGCATTCCACCGAGAAGCCGTTCAAGTGCGATTTCTGCGATTTCAGGACGAAAACCGCCAAGTATTTGAGGAAGCACGTGAAGACGCACAGGGGCGAGAGGACGACCTTCGAATGCGGCGTTTGCGATAAGAGATTTAATAATTCCGGCGATTTGAGTAGGCACGTGGTGATACACACGGGGGAAAACCGTTCGAAGCTGGCGCTTTGTGCGATTGTAAATACAACACGCAGAGGTCGCACGTCAAAACGTACGTGA
Protein Sequence
MSGRPRISGIPRMSGIPRMSGISRICECIVDGESALPFDEIETKTQTRKGRRLDKRFKCEHCDYVSHRSDTLKKHALRHTDRNPLVCQLCQQKYISTTTLKKHMKKHAAMEVQKPPKLTCETCDFKTERAEHFKRHLEKHVRSHQCDRCGDAFTTLATLKLHMRRHTGEKPYKCTLCDYKGAQSCQLAAHMKIHSGAKPFQCSKCDYRAALKGSVTKHMVMHSTEKPVKCNICGFETKTIKHLKNHLNIHTGEKAFECSVCSKRFSNSKDIKRHMLVHTGEKPFACTLCDYRATQGTNLKSHMKHRHKQSANLDDVPLSIRKGDLQRRFKCERCDFATTRADTLRKHLRRHTGEKPHACQLCDYKCTNPGNLKRHKMVHEAKEGAESNFTCEKCGFKTTQSDYLRKHLKRHGEPKPGADSLKYKCQYCDYRASRLNSLKRHILRHTGEKPYECKFCEYKCTMSGNLDRHLRARHHAELAEGGCEFACDLCGFRTTQADYLRKHLKRHGEHQFACHLCDYKCTQSASFRRHMVKHEVKEKGEEFEFEFACNVCSFKTTEASYLSKHMKRHADEKQSSPKHSSPSDCVWHKCDRCDYASIRAATLRKHMFTHTGEKPFACKQCSFTCSTSGNLRRHSLVHMAKEKVQEADKKFMCDVCSFKTRTARYLRKHMLVHSGEKPFQCDRCGDKFASSVILKMHNMRHTGEKPYACNICGYKCSQSGGLKRHLVLHTGIKTFQCPHCDYKAALKGTLTKHLAKHSSEKPFGCHLCNYRAKTAKHLKNHIITHTGERIHKCDICDKRFTLYRGLKRHMYVHTGEKPYACKFCDYRSTQQSNVKVHMKHRHKEFQFDEAGAKKDIPFLALSFGTFEEESGGVSPPTIKKPTGATVAPLNCESFDFNSDSSNAVKERVLTHASGNPFACLKYGQTKNAERHVMKGRADVKNLQQFVCGVCGFRTHQTRNLKRHVNTHERAYQCDRCGNTFTSLPNLKSHMRRHTGEKPYKCGVCDYKSAQACDLSAHMKVHTGARPFHCDKCDYKAALKGTLARHMVIHSPEKPFKCNVCSYETKTAKHLKRHTRTHTGEKAYECGVCAKGLADSKSLKRHLLIHAGEKPFACGLCDYRSIEPSNVKVHMRYKHKECNANEVTPSKNALSPGAFADHETILTVRTNQLFKCEPDAINEHVLICQICDLKCRTSPGLKRHMKKHDSPHTDGKQSHVCEICGFKTDAARHLKSHLQRHERSYQCDRCGHKSTTLQNLKSHMARHTGEKPFKCDACDYKCALVSDLAAHAKLHTGVKPFRCDKCDYRAAVKSNLANHMAAHSTEKPFKCDFCDFRTKTAKYLRKHVKTHRGERTTFECGVCDKRFNNSGDLSRHVVIHTGENRSKLALCAIVNTTRRGRTSKRT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01258852;
90% Identity
iTF_01258852;
80% Identity
iTF_01258852;