Pinq024584.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Prosopocoilus inquinatus
Gene Symbol
-
Assembly
GCA_036172665.1
Location
CM069876.1:51082753-51093585[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 48 2.5 1.5e+02 4.0 6.2 1 23 65 87 65 87 0.97
2 48 0.00019 0.012 17.0 0.4 1 23 93 115 93 115 0.98
3 48 0.0088 0.55 11.7 0.7 1 23 121 143 121 143 0.97
4 48 8.7e-05 0.0054 18.1 1.2 1 23 149 171 149 171 0.98
5 48 0.00011 0.0071 17.7 1.6 1 23 177 199 177 199 0.99
6 48 0.078 4.9 8.8 3.1 1 23 205 227 205 227 0.98
7 48 0.0092 0.57 11.7 1.1 2 23 234 255 233 255 0.96
8 48 2.5e-05 0.0016 19.8 1.7 1 23 261 283 261 283 0.99
9 48 0.009 0.56 11.7 4.4 1 23 296 318 296 318 0.98
10 48 0.011 0.67 11.5 0.9 1 23 324 346 324 346 0.94
11 48 0.0033 0.2 13.1 0.5 1 23 352 374 352 374 0.98
12 48 0.0014 0.089 14.2 1.8 1 23 380 402 380 402 0.98
13 48 9.5e-06 0.00059 21.1 0.5 1 23 408 430 408 430 0.98
14 48 0.016 0.98 10.9 3.6 1 23 436 458 436 458 0.98
15 48 0.00019 0.012 17.0 0.4 1 23 464 486 464 486 0.96
16 48 0.0019 0.12 13.8 0.6 1 23 493 515 493 515 0.98
17 48 4.4e-06 0.00027 22.1 2.7 1 23 521 543 521 543 0.98
18 48 7.3e-05 0.0045 18.3 3.6 1 23 549 571 549 571 0.98
19 48 0.069 4.3 8.9 5.4 1 23 577 599 577 599 0.99
20 48 0.00019 0.012 17.0 0.9 1 23 605 627 605 627 0.98
21 48 5.4e-05 0.0034 18.7 0.1 2 23 634 655 633 655 0.97
22 48 0.098 6.1 8.5 6.0 1 23 688 710 688 710 0.97
23 48 0.14 8.6 8.0 2.3 1 23 716 738 716 738 0.98
24 48 0.02 1.2 10.6 1.4 1 23 744 766 744 766 0.98
25 48 0.0013 0.078 14.4 1.6 2 23 773 794 772 794 0.97
26 48 1.9e-07 1.2e-05 26.4 0.7 1 23 800 822 800 822 0.98
27 48 0.00033 0.021 16.2 4.1 1 23 828 850 828 850 0.99
28 48 0.065 4.1 9.0 3.6 2 23 857 878 856 878 0.97
29 48 0.012 0.74 11.3 4.9 1 23 884 906 884 906 0.97
30 48 0.04 2.5 9.7 3.1 3 23 957 977 955 977 0.98
31 48 0.47 29 6.3 4.7 1 23 983 1005 983 1005 0.99
32 48 5.8e-06 0.00037 21.7 2.2 1 23 1011 1033 1011 1033 0.99
33 48 6.8e-05 0.0042 18.4 1.3 1 23 1039 1061 1039 1061 0.98
34 48 0.0024 0.15 13.5 4.1 1 23 1067 1089 1067 1089 0.98
35 48 0.00098 0.061 14.7 0.1 1 23 1095 1117 1095 1117 0.98
36 48 0.0022 0.13 13.7 3.2 1 23 1123 1145 1123 1145 0.98
37 48 2.2 1.4e+02 4.2 6.3 1 23 1151 1173 1151 1173 0.98
38 48 0.0002 0.013 16.9 2.4 1 23 1179 1201 1179 1201 0.98
39 48 4.4e-05 0.0027 19.0 0.7 1 23 1207 1229 1207 1229 0.99
40 48 0.00065 0.041 15.3 4.0 1 23 1235 1257 1235 1257 0.98
41 48 6.1 3.8e+02 2.8 0.5 1 13 1263 1275 1263 1276 0.86
42 48 0.0043 0.27 12.7 0.5 1 23 1290 1312 1290 1312 0.97
43 48 0.0021 0.13 13.7 0.7 1 23 1318 1340 1318 1340 0.98
44 48 0.0051 0.32 12.5 2.2 3 23 1348 1368 1346 1368 0.97
45 48 0.032 2 10.0 5.5 1 20 1375 1394 1375 1395 0.96
46 48 0.12 7.8 8.1 3.8 1 23 1422 1444 1422 1444 0.97
47 48 0.00038 0.024 16.0 5.8 1 23 1450 1472 1450 1472 0.98
48 48 0.044 2.8 9.5 1.8 3 23 1480 1500 1478 1500 0.96

Sequence Information

Coding Sequence
ATGTCTTGTTTCAGGATTTACTACGAGAATTTTAGCGCCGGCGTCGTCAGAAATTTAGACGAGTGCAGCTTACTGAAATCGCCGAAAGATGGAGTCAAGAAGCAATTATTCAAATGTGATTGCTGCGATTTCACGAGCATCTACCTGCAAAGCGTCAAAAGGCACAAAGTGCGCCACAGCGACGAAAAACCGTTTAAATGCAAGTTCTGCACTTACAAATGTAAACTTCCTAATCGGCTGAGGGAACACATGTTCAACCACACCAGCGATAAGCCGTTTAAATGCTCGCTTTGCGATTTCGAGAGCGTCCGTTCGAGCAATCTGAAAGCGCACCTGTTGATACACGCCGACGAGAGACCTTTCAActgcgacctctgcgattacgGTTGCAACAACCTGGCGTCCTTGAAAACGCACGTcctgatacacaccggcgatAAGCCTTTCAAATGCACGATGTGCCCCTCCGAATTTCGCCGAGCTCAGTACCTGAAAGAACACATGAGGTTACACGGCGACGAGAAGCCTTTCAAGTGTGAGCTCTGTGATTACGAATACAGCCACCTTCAGTCTTTGAAAGTGCACATGGCTACGCACAGGGGCGATAAGCCGTTCAAGTGTGAATTTTGCGACTTTCGTAGTAAGTGGcagaaaaatttgaagaaacatTTGTCGATGCACGACAACAAAGACCCGCTCGAATGCgacgtttgcgattataagtgtgaTAAATCGGGCAGATTAAAACAGCACATGTTGATACACAAGGGCGAAAGTACTTTTAAATGCGACACCTGCGACTATAGCTCTAAGCGAGCAGGGGATTTAAACAGACATTACAGAAGACATCGGAAGTCACCACGCGATCACGCAGACAAAAAACGCTTTAAATGTCCTTTGTGTAATTTCACGAGTAACCACCGCAGGAGCTTGAAACGGCACGAGCTGCGCCACACCGACGAAAAACCGTTCGCgtgcgacctctgcgattacagGTGCAAAGATTCCGCGGGTTTGAAGCAGCACAAGGTGATACACAGCGACGAGAAGCTCTTCAAGTGCGCGCTCTGCGATTACGAGTGCGCCTACGCCGTGAGCCTGAAGCGTCACGTGATGATACACAGCGACGAAAGGCCGTTCAAGTGCGACTTCTGCGATTACGGCTGCAATAACCCCGGATCCTTGAAAACGCACGTGCTGAAGCACACCGGCGAGAGCCCGTTCGAGTGCGCGACTTGCGGAAATCGATTCCGCCGAGCCGCCTACTTGAGGCAACACATGAGGATACACAGCGGTGAGAAACCGTTCAAGTGCAACTCCTGCGAATACAGGTGCAACAACACCGGATCTCTGAGGACGCACATGTTGCTGCATACGGGAGAAAAGCCGTTCGCATGCGTGACGTGCGGTTGGCAGTTTCGCCGTGCCATTCACTTGAAACAACATCTCATCGTGCACAGTGGTAATGAGCCTCTATTTAAGTGCAATCTCTGCGAATACGAATGTAATATGTCGGGAGCTTTGAAAGCGCATATGCTGGTGCACACCGACGATAAGCCGTTTGAATGTTTGACTTGCGGCTGTCAGTTTCGGCGAGCTGCAAACTTGAAGCAACACATGAGGACGCACAGCGACGAGCGACCGTTTAAGTGTCACCTCTGCGAGCACGTCTTCAACAATCCGCACGGTTTGAAGGCGCACATGTTGGTGCACACCGACGATAAGCCGTTCAAGTGCGAATTCTGCGAGTTCCGCAGCAAGCGGCACAACAGTTTGAAGACGCACTTGTTGACGCACAACGACGATAAGCCGTTCGAATGCGGCGCTTGCGGTTTCGCGTGTAAGCGGTCCGAAAGCTTAAAGCGACACATGCTGGTGCATAACATTGAGAAACCTCTTAAATGCGCCATCTGTGATTATAAATATGTACGACCTGGCGATTTAGCAAGACACATGATAAGACATCAGTCGAATTATGCGACGTGCGGCGCCGCAACCTACTTCGATTATTACAGTTTGTTGAAGTCGGAagacgcgttcgtgccggatgACAAAAAACGATTCCGATGCCATCTGTGCAACTTCACGAGCAACTACTGCGCGAGCTTGAAAAGGCACATCATCTACCACAGCGACGAAAAACCGTTCAAgtgcgacctctgcgattacagGTGCAAGCTGGCCATCAGACTCAAGGAGCACCTGTTGAGACACGACGGCGATAAGCACTTCAAATGCGTCATCTGCAATTACCAGTGCGCGCAAGCGAAAATCCTGAAGAGGCACATGTTGATACACAGCGACGAGAAGCTGCTGAAATGCACCCTCTGCGATTACGGCTGCAACTATTCGGAAAGCCTGAAGAACCACATgctgatacacaccggcgacAGCCCTTTCCGATGCACGATCTGCGGTTTTCGGTTTCGCCGGGCGGCGAACTTAAAACGGCACATGATaatacacaccgacgaaaaACCGTTTAAATGCGAGCTGTGCGATTACGCGTGCAGGCATTCCGGAACTCTGAAGGAGCACATGTCGACGCATAACACCGAAATGCCGATGAAGTGCGATCTCTGCGACTATCGATACACCTGGCATAAGAATTTTCGGAGGCATTTGCTGACGCACAGCGACGATAGGCCGTTCAAATGCGAgcactgcgattataaatgtaaGCAGAAGGGAAGACTGAAAGAGCACGCGTTGGTGCATACCAGCGAGAAGCCTTTTAAATGTGATTACTGCGAGTACAGGACATGCGAAACGTCCAGCGACGATTACAAACTCGAATCGCGCACGGTGCAGCCACCTAAACCCAAGTCACACGCGTCGAAACACGGAAACATTCGGAAACCATTCGGATGCCACTTGTGCAATTACAGAACTGATTACTACGGAAACTTAAAGAGGCACAAGTtgacacacaccgacgagaaaccttACAAATGCGACGCTTGCGATTACAGATGCAAGCATTCGCTAAGGTTGAAAGAGCATGTTTTGACGCACACTGGCGATAAGCCCTTCAAATGCATGATTTGCGGTTTCGAATTTAGCCGCGCCGGTCATTTGAAAACGCACATGACGACGCAcagcgacgagaagccgttcgaatGTTACGTCTGCGATTACGCCTGCAACCGTTCCGGAAGCCTCAAAGCGCACATGTCGACGCACGACGGCGATAAGCCCTTCACATGTAAACTCTGCGATTACCAGTGTAGGCGGCCCGAAGATTTCAAGCGACACGAGTCGACGCACGCCGacgaaaagcaatttaaatgcgACCTGTGCGATTTCGTAGGCAAATATCCGGGGGAATTAAAAAGCCACATGTTGATACACGGCGGTGACAAGCGATTCAAGTGCAACCTCTGCGATTACGAGTGCAACCACTCCGCGAGCCTGAAGGCGCACGTGTCGATGCACaacggcgagaagccgttcaagtGCAAGCTCTGTAACTACCGCTGCAGGTGGTACGAGAATTATAAAAGGCATTCGCTCACGCACACCGACGATAAACCGTTCGAATGCGACCTCTGCGGTTACAAGTGCAAACAATCCGGAAGACTAAAGAAGCACATGCTtgtgcacaccggcgagaagcctttTAAATGCGCCGTTTGCGACTATAGTTGTATACGACCGGGGCAGTTGGAAGCGCACACGCGgagacacaccggcgagaagccgttccaGTGCGTTATATGCGATTGCAAGTGTGCTTCTTCCAGAAACTTAAAGACGCACATGatgatacacaccggcgagaagcctttCAAGTGCGAAGAATGCGATTATGAATCTAGacGCCCCCGACGGGCTTCTAATAAACTTAAAGTTACGGACGAGATAACGTTCGATTGCCAGATATGCGATTCTACGTTTGACTCCTGGAAACGCTTACGCGAGCACGTGCTGAGACACACCGACGAAAAGCTGTACAGATGCGCCGTTTGCGATTGCAAATTTCGAGATCCCGAGCGCTTGGAGGAGCACGCGTCGACGcacgccgacgagaagccgttcggttgtgaacTCTGCAGTTACACATGCCGACAGCTGTCAAATTTGAAGCAGCACGTGCTGTCTCATACCGACAAGAAGCCGCCGTACAGGTGCCAGcattgcgattacaagtgtcgAAACCTGACCACTTTTAAACGGCACATATTACCATGCGCCGGCGAGATGCCGGGCAGTCGCTGTCCGTCCGCTACGTTATACAAGCGCAGACGCCGCAGCGAAAAACCGTTCTGTTGTAATTTGTGCGGTTTCGGGAGCAGACATTTGGGGAGCATGAAGCGTCACGTGTTGacacacaccggcgaaaagccgTTCCGTTGTGACGACTGCGATTACAGATGTCGACGGAGCGAGCATCTGAAACAGCACAGgttgatacacaccggcgagaagccccTGGCTTGCGGCCTTTGCGACTTCAAGAGCCGACACATTAAAGATTTGAAGAAGCACATGATTAAACATGCAGAcgaattgaaatga
Protein Sequence
MSCFRIYYENFSAGVVRNLDECSLLKSPKDGVKKQLFKCDCCDFTSIYLQSVKRHKVRHSDEKPFKCKFCTYKCKLPNRLREHMFNHTSDKPFKCSLCDFESVRSSNLKAHLLIHADERPFNCDLCDYGCNNLASLKTHVLIHTGDKPFKCTMCPSEFRRAQYLKEHMRLHGDEKPFKCELCDYEYSHLQSLKVHMATHRGDKPFKCEFCDFRSKWQKNLKKHLSMHDNKDPLECDVCDYKCDKSGRLKQHMLIHKGESTFKCDTCDYSSKRAGDLNRHYRRHRKSPRDHADKKRFKCPLCNFTSNHRRSLKRHELRHTDEKPFACDLCDYRCKDSAGLKQHKVIHSDEKLFKCALCDYECAYAVSLKRHVMIHSDERPFKCDFCDYGCNNPGSLKTHVLKHTGESPFECATCGNRFRRAAYLRQHMRIHSGEKPFKCNSCEYRCNNTGSLRTHMLLHTGEKPFACVTCGWQFRRAIHLKQHLIVHSGNEPLFKCNLCEYECNMSGALKAHMLVHTDDKPFECLTCGCQFRRAANLKQHMRTHSDERPFKCHLCEHVFNNPHGLKAHMLVHTDDKPFKCEFCEFRSKRHNSLKTHLLTHNDDKPFECGACGFACKRSESLKRHMLVHNIEKPLKCAICDYKYVRPGDLARHMIRHQSNYATCGAATYFDYYSLLKSEDAFVPDDKKRFRCHLCNFTSNYCASLKRHIIYHSDEKPFKCDLCDYRCKLAIRLKEHLLRHDGDKHFKCVICNYQCAQAKILKRHMLIHSDEKLLKCTLCDYGCNYSESLKNHMLIHTGDSPFRCTICGFRFRRAANLKRHMIIHTDEKPFKCELCDYACRHSGTLKEHMSTHNTEMPMKCDLCDYRYTWHKNFRRHLLTHSDDRPFKCEHCDYKCKQKGRLKEHALVHTSEKPFKCDYCEYRTCETSSDDYKLESRTVQPPKPKSHASKHGNIRKPFGCHLCNYRTDYYGNLKRHKLTHTDEKPYKCDACDYRCKHSLRLKEHVLTHTGDKPFKCMICGFEFSRAGHLKTHMTTHSDEKPFECYVCDYACNRSGSLKAHMSTHDGDKPFTCKLCDYQCRRPEDFKRHESTHADEKQFKCDLCDFVGKYPGELKSHMLIHGGDKRFKCNLCDYECNHSASLKAHVSMHNGEKPFKCKLCNYRCRWYENYKRHSLTHTDDKPFECDLCGYKCKQSGRLKKHMLVHTGEKPFKCAVCDYSCIRPGQLEAHTRRHTGEKPFQCVICDCKCASSRNLKTHMMIHTGEKPFKCEECDYESRRPRRASNKLKVTDEITFDCQICDSTFDSWKRLREHVLRHTDEKLYRCAVCDCKFRDPERLEEHASTHADEKPFGCELCSYTCRQLSNLKQHVLSHTDKKPPYRCQHCDYKCRNLTTFKRHILPCAGEMPGSRCPSATLYKRRRRSEKPFCCNLCGFGSRHLGSMKRHVLTHTGEKPFRCDDCDYRCRRSEHLKQHRLIHTGEKPLACGLCDFKSRHIKDLKKHMIKHADELK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-