Pinq024238.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Prosopocoilus inquinatus
Gene Symbol
-
Assembly
GCA_036172665.1
Location
CM069876.1:47041722-47056543[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 50 0.0053 0.33 12.4 2.5 1 23 14 36 14 36 0.97
2 50 0.03 1.9 10.1 1.5 2 23 43 64 42 64 0.96
3 50 0.008 0.5 11.9 1.0 2 23 70 91 69 91 0.94
4 50 0.0035 0.22 13.0 6.5 1 23 97 119 97 119 0.98
5 50 0.00067 0.042 15.3 3.4 1 23 125 147 125 147 0.99
6 50 0.00037 0.023 16.1 1.3 1 23 153 175 153 175 0.99
7 50 0.0062 0.39 12.2 0.7 1 23 181 203 181 203 0.99
8 50 0.00033 0.021 16.2 3.7 1 23 209 231 209 231 0.98
9 50 0.026 1.6 10.3 1.6 2 23 236 257 235 257 0.96
10 50 0.0071 0.44 12.0 4.6 2 23 301 322 300 322 0.96
11 50 0.0076 0.47 11.9 4.0 1 23 328 350 328 350 0.97
12 50 7.9e-06 0.00049 21.3 2.8 1 23 356 378 356 378 0.98
13 50 0.16 10 7.8 0.5 1 23 385 407 385 407 0.98
14 50 0.062 3.9 9.1 1.3 1 23 413 435 413 435 0.96
15 50 0.0031 0.2 13.1 4.3 1 23 441 463 441 463 0.98
16 50 0.01 0.62 11.6 0.3 1 23 469 491 469 491 0.99
17 50 0.0002 0.012 16.9 2.8 1 23 497 519 497 519 0.99
18 50 0.028 1.8 10.2 5.6 1 23 575 597 575 597 0.98
19 50 0.0013 0.078 14.4 0.5 1 23 603 625 603 625 0.98
20 50 0.0004 0.025 16.0 2.0 2 23 632 653 631 653 0.97
21 50 0.00016 0.0097 17.3 0.4 1 23 659 681 659 681 0.98
22 50 0.00029 0.018 16.4 2.6 1 23 687 709 687 709 0.99
23 50 0.00033 0.021 16.2 4.5 1 23 715 737 715 737 0.99
24 50 0.2 13 7.4 0.6 1 23 743 765 743 765 0.98
25 50 0.0057 0.36 12.3 5.1 1 23 820 842 820 842 0.99
26 50 0.0029 0.18 13.3 0.9 1 23 848 870 848 870 0.96
27 50 4.2e-05 0.0026 19.0 0.5 1 23 876 898 876 898 0.98
28 50 0.0014 0.086 14.3 4.0 1 23 904 926 904 926 0.97
29 50 0.0011 0.07 14.6 3.1 1 23 932 954 932 954 0.99
30 50 1.9e-05 0.0012 20.1 1.4 2 23 961 982 960 982 0.97
31 50 0.0032 0.2 13.1 0.1 1 23 988 1010 988 1010 0.99
32 50 0.0015 0.095 14.1 5.0 1 23 1016 1038 1016 1038 0.99
33 50 0.042 2.7 9.6 0.9 1 23 1090 1112 1090 1112 0.98
34 50 0.00054 0.034 15.6 2.3 1 23 1118 1140 1118 1140 0.98
35 50 0.0037 0.23 12.9 2.3 1 23 1146 1168 1146 1168 0.98
36 50 0.00022 0.014 16.8 2.4 1 23 1174 1196 1174 1196 0.96
37 50 2.2e-05 0.0014 19.9 2.1 1 23 1202 1224 1202 1224 0.98
38 50 0.00044 0.027 15.8 4.7 1 23 1230 1252 1230 1252 0.99
39 50 0.0029 0.18 13.3 0.1 1 23 1258 1280 1258 1280 0.99
40 50 6.4 4e+02 2.7 2.0 1 13 1286 1298 1286 1300 0.89
41 50 0.034 2.1 9.9 4.5 1 23 1336 1358 1336 1358 0.98
42 50 0.0027 0.17 13.4 5.8 1 23 1364 1386 1364 1386 0.99
43 50 0.011 0.71 11.4 0.9 1 23 1392 1414 1392 1414 0.98
44 50 0.0024 0.15 13.5 1.8 1 23 1420 1442 1420 1442 0.98
45 50 0.0083 0.52 11.8 2.6 1 23 1448 1470 1448 1470 0.98
46 50 1.2e-05 0.00072 20.8 3.7 1 23 1476 1498 1476 1498 0.99
47 50 0.027 1.7 10.2 0.2 1 23 1504 1526 1504 1526 0.99
48 50 0.00044 0.028 15.8 3.8 1 23 1532 1554 1532 1554 0.99
49 50 0.0021 0.13 13.7 1.4 1 23 1560 1582 1560 1582 0.98
50 50 0.63 39 5.9 1.4 2 23 1588 1609 1587 1609 0.95

Sequence Information

Coding Sequence
ATGAAACAGCACATGAAGACCCACTCCGACGAGAAACCTTTCGCCTGCGAGATCTGCAACCATAAGTGCCGATTCGCCGGAGGATTAAAACAGCACATGTTGATGCACACCGACGAGAGGCAgttggtctgcgatcgctgcgGTTACAAGTGCCAGGCGGACTCGGCTCTGAAGCAGCACATGCGAAAGCACACCGGCGAAAAACTCGTTTGCGACCTATGCGGCCAAAAGTTTCTGCATTCCGGAAATTTGAGAAGGCACAAGCTGGCGCACGCCGGCCCCAAACCTTTCAGCTGTGAACTTTGCGATTACACTTGTCACCGTTCGGAAAATTTAAAGCGACATAGATTAAaacataccggcgagaagccaTACAAATGTAGTATCTGCGATCACAAATGCGCACTGCCCGTGTACTTGAAGCGGCACATgctgacgcacaccggcgaaaaaCGCTTCAAGTGCGACCTGTGCGGTTACGAATGCAACCAGGTCGGAAATTTACGGTCGCATTTGTTGACGCAcagcgacgagaagccgttcaagtGCGCGCGCTGCGAATTCGTCGGCAAGACGGCCAGGTATTTGAAGTTGCACATGCGGGTGCAttccgacgagaaaccgtttaagTGCGACCTCTGCAAATACGCCTGTAAGTTTCAGGGTAACTTACGCAAGCACATGTCGATTCACGAGAGTCTGCTCCGATGTAACGTTTGTGAGTACACGTGTAAGCTGGGCAGCGATTTAAAAAGGCATGTGTTGTCGCATGCAGGCGAGTTCTTTGAGCCTTCAATAATTGCCGCCGGAAATGGGGCAACCGAACCTGGCTCTCATTTTAAACGTGCCGCGCCTACGGCCAAGTACAGCATCCTGTCAAAAGACGGCGTCAGGCTATTAATTTGTGACCTCTGCGGTTATAAATGCCGGCGGATGTCTCACATCAAACAGCACCTGAGGACCCATTCCGACGAGAAGCCTTTCGCCTGCGAGATCTGCAATCACAAGTGCCGATTCCTAGGAAGCTTGAGAAGCCACATGTTGACGCACACCAACGAAAAGCAGTTCGTCTGCGACCGTTGCGGTCACAGATTCAGCACGGCCTTAAGTTTGAGGAAGCACATGCGCACACATTCCGGCGGCGAGAAGCTGTACAAGTGCGATCGGTGCGCGGAAAAATTTCAAGAGTACATGGCTTTAATAAGGCACAAGGCAACGCACACctacgagaagccgttcgcttgTGAACTGTGCGATTACACTGCCCTGCACGCGTATTATCTGAAACGTCACATGCTAaaacacaccggcgaaaagCGATTCGAGTGCTCCCTCTGCGGTCATAAGTGCGCGTTCGCTTCGCAACTGACGCGGCACAAGTTGACGCACACCGGAGAGAGACGCTATAAATGCAGCCTGTGCGATTTCGAAGCGAGCCTGTCCGGAAATTTAAAGTTGCACTTGttgacgcacaccgacgagaagccgtttaaGTGCGGAAGCTGTAAACACGCGTTCAAATCGGCCAGGTATTTAAAAATACACATGCGAGTGCACTCGGACGAAAAGCCGTTTAAGTGTAAGCTCTGCGCATACGCGTCCAGATGTTTTAATTCGACAATTCCCGACCTAAGGGCACCACCACCACCCGAACATGGTTTCGACGAATTTGCGCCGCCCCTCAAATACAACGCGCTGTTATTGGACGGCGGCGTGAAACTGTTCGTTTGCGATCGCTGCGATTACCGAAGCCAACACAGCGGTCACTTCAAAGAACACATGAAGACCCACTCCGACGAGAAGCCCTTCACCTGCGAGATTTGCGATTACAAGTCTCAATTCGCCGGCAGCCTGAAGAAGCACATGCTGATACACACCGACGAAAAGCAGGTCGTGTGCGACCGTTGCGGTTACAAGTGCCGCGCGAGCGGcaatttgaaacagcacatgcgaaaacacaccggcgagaaaccgttcagttgcggCGAGTGCGGTCGAAACTATCAGCAGAAGGGGGCTTTGAAAAGGCACGAGCTGACGCACACGCGCGAGAAACCGTACACCTGCGAACTGTGCGATTACAGCTGTCAACGACCTGAATACCTGAAAAGCCACATGCTGAAACATACCGGTGAAAGACCTTACAAATGTGCCTTGTGCGATTATAGATGCGCGCTGTCGTCGCATTTGAAACGGCACATGTTGACGCACACGGGCGAGAAACGCTTCAAATGCCACCTGTGCGCTTACGAGGGGAGCGCGGCCGGAAACTTCAGGTCGCACttgttaacgcacaccgacgagaagtcGTTCAAGTGCGATCGTTGCGAATACGTGTGCAAGTCGGCCAGGTGGCCCGGAATTTCCGAACCCACATTTCTGGACGAACACAACCACCAAGTTGATTCTgattttaattcccccaaatACATTGTGTTAAATAACGGCGTGAGGCTGTACGTTTGCGAccactgcgattataaatgccaaaCGATCAGTAGCATAAAACAGCACATGAGGACTCACTCCGACGAGAAGCCTTTCGCGTGTGAGATTTGCAACTATAAATGCCGGTTCGCTGGCAATTTAAGACAGCACGCGTTAATACACACTGACGAAAGGCCGTTCGTGTGTGACCGCTGTGGTTACAAAACCCGCAGTGCCGGAGCTCTGCAGCAGCACATGCgaaaacacaccgacgagaaaccgttttgTTGCGATCGGTGCGGTCGGAAATACAAACGGGAAAGAGCTTTGAAAAGGCACGAGCTAACGCACACCCGCGACAAACCGTACACCTGCGAACTGTGCGATTACAGTTGTCAACGTTCGGATTTTCTGAAAATTCACATGCTAAAACATACCTCCGAAAGACCTATCAAATGTACCCTGTGCGATTATAACTGCGCCCGACCTGGGAATTTGAAACGGCACATGCTGACGCACACAGGCGAAAAACGCTTCAAATGCAAGCTTTGCGATTACGGAGCGAGCGTGGCCGGGAACTTAAGGTTACACTTGTTGACGCATACCGACGAGAAGTCGTTTAAGTGCGAACATTGCGAATACGTGTGCAAGTCGGCCAGGTATTTGAAAATACACACGCGAGTGCATTCGGATGAGAAGCCGTTTAAGTGTAGCGTTTGCGAATACGCGTCCAGgtgGCCTGGTATCTCTAAACCTTCAATTCTAAGTACAACCGAATACGACAGAAAAGGTTCGGAATACGTGCTTAATTACATCCTGTTAAATACCGGCGAGAAGCTCTTCgtttgcgatctttgcgattataaatgccgaccgATCGGCAGCATAAAACAACACATGAAGATCCATTCCGACGAGAAGCCATTCACGTGCGAGATCTGCAACTACAAGTGCCGATTCGCCGGAAATCTGAGGTACCATATGGCGATGCACACCGACGAATGGTCGTTCATATGCGATCGCTGCGGTTACAAGACCCACACGACCGGAGCCCTGCAGCGGCACATGCAAAaacataccggcgagaaaccgttcagctgcGAACAGTGCGGCAAAAAGTACCAGCACGCTGGAAACTTGAAGAGGCACAAGCTAgagcacaccggcgagaagccgttcagttgtgccGTGTGCGGTTGCAGCTTTCGCCGGGCGGAATACCTGAAACGTCACCTGCTAAGGCACACCGGCGAAAGGCCGTTTAAATGCGCCCTGTGCGATCACAAGTGCGCGCAATCTTCACAGCTGAAAACGCACATGCTGACGCACACGGGCGAGAGACGCTTCAAATGCAATCTTTGCGATTACGAAGGGAGCGTGGCCGGGAACTTAAGGTTACACTTgctgacgcacaccgacgagaagtcGTTTAAGTGCGAACATTGCGAATACGTGTGCAAGTCGGCCAGGTGGTCCGAAATTTCCGAACCAAACGCAATTTTAAGCATAACTAAATACTACAGAAACGGTTCCGAGCTTGTACTTAATTACATGCTGTCAGATGACGGCGTGAGGCTCTTCGTTTGCGACCAATGCGACTACAAATGCCGACGAATCGGTCACATGAGACAACACCGGATGATccacaccaacgagaagcctTTCACGTGCGAGATTTGCAATTACAAGTGCCGATTCGCCGGATGTCTCAGAAAGCACatgttaacacacaccgacgaaagGCCGTTCGTATGCGATCGCTGCGGTTATAAAAGCCGCACGACCGGAATTCTGAAGCAGCACATGCGgatgcacaccggcgagaaaccgtttagcTGTGATCTGTGCGACCGGAGGTATCAAGAGAAGGTTTCTTTGAAAAGGCACAAGCTGACGCACGCCAACGTgaagccgttcagctgtgaaCTCTGTGATTATAATTGTCTGCGTCCAGATTATCTAAAGCGTCACATGTTAAAGCACACCGGTGAAAGGCGATTTAAATGCCCCCTGTGCGATCACAGGAGCAAGCAATCTTCGCAGTTGAAGCGGCACATgttgacgcacaccggcgagaaaagCTTCAagtgcgatctttgcgattacgaAGGGAGTTTGGCCGGAAATTTCCGGTTGCACttgttaacgcacaccgacgagaaatcGTTCAGGTGCGACCGCTGTGAATACACGTGCAAGACAGCCAGGTATTTAAAAATACACATGCGAGTGCACTCGGATGAGAAACCGTTTAAGTGTGATTTTTGCGAGTACGCGTCCAGGTTTCAAGGTAACTTACAGAAACACGTGACAACGCACGACGAGAAACTGCTCAGGTGTGGCGTGTGCGATTACGCGTGTAAATTGGTCAAGGATTTTAAAAAACATGCGTCATCACATGCGTGA
Protein Sequence
MKQHMKTHSDEKPFACEICNHKCRFAGGLKQHMLMHTDERQLVCDRCGYKCQADSALKQHMRKHTGEKLVCDLCGQKFLHSGNLRRHKLAHAGPKPFSCELCDYTCHRSENLKRHRLKHTGEKPYKCSICDHKCALPVYLKRHMLTHTGEKRFKCDLCGYECNQVGNLRSHLLTHSDEKPFKCARCEFVGKTARYLKLHMRVHSDEKPFKCDLCKYACKFQGNLRKHMSIHESLLRCNVCEYTCKLGSDLKRHVLSHAGEFFEPSIIAAGNGATEPGSHFKRAAPTAKYSILSKDGVRLLICDLCGYKCRRMSHIKQHLRTHSDEKPFACEICNHKCRFLGSLRSHMLTHTNEKQFVCDRCGHRFSTALSLRKHMRTHSGGEKLYKCDRCAEKFQEYMALIRHKATHTYEKPFACELCDYTALHAYYLKRHMLKHTGEKRFECSLCGHKCAFASQLTRHKLTHTGERRYKCSLCDFEASLSGNLKLHLLTHTDEKPFKCGSCKHAFKSARYLKIHMRVHSDEKPFKCKLCAYASRCFNSTIPDLRAPPPPEHGFDEFAPPLKYNALLLDGGVKLFVCDRCDYRSQHSGHFKEHMKTHSDEKPFTCEICDYKSQFAGSLKKHMLIHTDEKQVVCDRCGYKCRASGNLKQHMRKHTGEKPFSCGECGRNYQQKGALKRHELTHTREKPYTCELCDYSCQRPEYLKSHMLKHTGERPYKCALCDYRCALSSHLKRHMLTHTGEKRFKCHLCAYEGSAAGNFRSHLLTHTDEKSFKCDRCEYVCKSARWPGISEPTFLDEHNHQVDSDFNSPKYIVLNNGVRLYVCDHCDYKCQTISSIKQHMRTHSDEKPFACEICNYKCRFAGNLRQHALIHTDERPFVCDRCGYKTRSAGALQQHMRKHTDEKPFCCDRCGRKYKRERALKRHELTHTRDKPYTCELCDYSCQRSDFLKIHMLKHTSERPIKCTLCDYNCARPGNLKRHMLTHTGEKRFKCKLCDYGASVAGNLRLHLLTHTDEKSFKCEHCEYVCKSARYLKIHTRVHSDEKPFKCSVCEYASRWPGISKPSILSTTEYDRKGSEYVLNYILLNTGEKLFVCDLCDYKCRPIGSIKQHMKIHSDEKPFTCEICNYKCRFAGNLRYHMAMHTDEWSFICDRCGYKTHTTGALQRHMQKHTGEKPFSCEQCGKKYQHAGNLKRHKLEHTGEKPFSCAVCGCSFRRAEYLKRHLLRHTGERPFKCALCDHKCAQSSQLKTHMLTHTGERRFKCNLCDYEGSVAGNLRLHLLTHTDEKSFKCEHCEYVCKSARWSEISEPNAILSITKYYRNGSELVLNYMLSDDGVRLFVCDQCDYKCRRIGHMRQHRMIHTNEKPFTCEICNYKCRFAGCLRKHMLTHTDERPFVCDRCGYKSRTTGILKQHMRMHTGEKPFSCDLCDRRYQEKVSLKRHKLTHANVKPFSCELCDYNCLRPDYLKRHMLKHTGERRFKCPLCDHRSKQSSQLKRHMLTHTGEKSFKCDLCDYEGSLAGNFRLHLLTHTDEKSFRCDRCEYTCKTARYLKIHMRVHSDEKPFKCDFCEYASRFQGNLQKHVTTHDEKLLRCGVCDYACKLVKDFKKHASSHA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-