Basic Information

Gene Symbol
-
Assembly
GCA_036172665.1
Location
CM069873.1:27687184-27690473[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.073 1.4e+02 3.6 0.1 27 46 284 304 277 304 0.77
2 5 2.7e-09 5.3e-06 27.4 0.1 2 43 311 354 310 357 0.92
3 5 3.5e-09 6.9e-06 27.0 0.0 1 46 363 412 363 412 0.97
4 5 2.4e-10 4.7e-07 30.8 0.0 1 46 419 464 419 464 0.98
5 5 2.9e-08 5.7e-05 24.1 0.3 2 43 472 513 471 515 0.91

Sequence Information

Coding Sequence
ATGGATGACGATGTAGAGGATATTAGAAAATTAGACGagattcttaaaaaagaaatcgaaaactCTAATAATCTCCAAGAAGAAATTGACGAGTTTATAAACTGCATTAGTGATGATGAAGAGCATTTGGAAGGATTCGAAACCGAGAATATAAACTTTGAAGAGTTCGATGTAAATAGACTAGACGAAATAGCGAGTAACTTCTGCAACGTCAACAACATCAATTTCAGCAATGACCTTAGCTTGATAAAATATTACCTAAAGAAAGAGGAAATCAAAGTAATAAATTCATGCAGAGATCCCCAGTTGAAGaaactattaattttaaatcgtgtGAAATTTATACAACTTCAAAACACTCACGTGAATTTatatgaaactttaaaaaaatgcactGCATACATCAAGGACACAGAACAAGAAATGAAGGAATTTTATAAGAAGCCGCAGATGAATCGGAAAAGCATAGTTCCCAGATTAGGACATCCATATTTCAAGAGTAAGAATACGATTTCTTGCCCACCGAACAGCGATACATTGAGAAAAAgggaaaataaagaattaacaGTAGATTACTTACCTCCAGTGTCGAGGTGGACACTTGAGGACCAGACAGTTTTAAACAGAGCCGTGATATTTAACTACTGGAATCGCAGCATTGAACAATTAGAGAAAAGATTAAAGACTTTGCACCTTGTAAAAAGGACTTCAACAGATATTGAAACCATTGAACTTGTTACTTCGGATATTGAAAAAGCCGAGGCTGAGCTCGCGGAATTAAAAAATTGCGAAAATCCTGTCCCACCACCTTTAGACTGCAGTGATGACGTAAACTGGGTTTACATTGCAAGTGAAGATTTAAATGgtAGACATACTCCTTGTTCATGCAAAGCTTTCTGGACTCAGTATTTGCATCCTTCTATTAACAAATTAAACTGGAATgatgaagaaaatgaaataattagaaTGTTAGTGGAAGAATATAACTGTCAAAATTGGGATGCAATTGCTGCGAGATTAGGAACCAACAGAAGTGGATTTTCCATATGTGTTCACTACCATGCAAGATTGAGCGATAAGTTCAAGAGAGATCGATTTGAACCAGAAGAGGATGCATTTCTTATGGAACTAGTGGACTCATGTCGAATTGGCAACTATATTCCTTGGACAAAAGTGGCGCATCAGTTCGACAACCGCACTAAATGCCAAATATACCATAGATATAGGTACTATTTAATGTATAAAAACGTAACTAAGGGGGCTTTCTCTGAAGCTGAAGATGTTTTACTCTTGTGCCTTATCAATAAATTTGGGACAGACTTCTCTATATGCTCGAGGTACATACAAAATCGTTCCCCGATGCAATTAAGTCACCGGTACAATAACTATTTGAAACGCGATGGTTTAAATTTCGGAAACTGGACCGTTGCAGAagataaaaagattttagaaCATGTTCGGAATAATGGCCCAAAATGGTGGGGATCAATCATAGGAGTTTTAAGGAGGAATCGCACTCACATTCGGCAAAGGTATTTAGTTCTTTCCAAGTGGTTGCTTAATCATCCCGAGCGGACTCTCGAAGACATGCCAAGGAGAAGACAGTCATACAAACAAAAAGTCGATTTACAAACAATCAGAGCAACAGCCAACAGGTTCAAAGAATCAAAGGAAATACCCAGTTTAGAAACAATAAAATctcatttaaaaatcgtagatAAGAACATTGTActgaaagtagaaaaaaaagaaacaaaccatTTGATTGATAACGAGttaatagatttttttcaaaGTACCTGCAAGGTGAGGACAGGACGAAAAGTCACACAAGAAAGTCTGCAGCAAGTAGTAAATACTGTGAAGGCTTTTTTGTCATTAATGGAAGTCACACTAGAAATCCCTGATGATAATACAATTAGTGAAAATCCATTATTAGATCAATTAGATTTAGAAATACTGGGTCTTTTAAAACAATCTACCAACAGTGATAGTCATTCAACGTcgataaaacaaaaagacgTATCACTCCCAGGCTGTTCACAAAATATTCTTAGCGCAAGCGCAACAGAGATGTCATTTACTCAATGTGGTTTACCTCAAAATCAAATCGCACTCTTACCACCAAATATCAACAGTTTAGTTGGTTTAAGAAAGCCTCCCGAGAATTTAAATTTGCTGAACACATCTCTAGAGCCAGTTTCAGAGGACAAAACGGAAAAATTCCGTCGGAAAGTCGGAAGGCCCCGGaaagatttttctaaaattaacttGATGTTGAAGGCTAAACGCGAGAAAGCActagataaacaaacaaacgcgCAAAAGCCTGAAGCAGACCTTGAAATAAAAGAACCACCAAAGATTTTAAACGGTCTTAGTCCACTACAAATGGCATTGACCAATAATATTGCTCCAATGGCAATAGAGGACTTGGACTTGGTGCTGGAATACCTGGAAGTAAAGTAA
Protein Sequence
MDDDVEDIRKLDEILKKEIENSNNLQEEIDEFINCISDDEEHLEGFETENINFEEFDVNRLDEIASNFCNVNNINFSNDLSLIKYYLKKEEIKVINSCRDPQLKKLLILNRVKFIQLQNTHVNLYETLKKCTAYIKDTEQEMKEFYKKPQMNRKSIVPRLGHPYFKSKNTISCPPNSDTLRKRENKELTVDYLPPVSRWTLEDQTVLNRAVIFNYWNRSIEQLEKRLKTLHLVKRTSTDIETIELVTSDIEKAEAELAELKNCENPVPPPLDCSDDVNWVYIASEDLNGRHTPCSCKAFWTQYLHPSINKLNWNDEENEIIRMLVEEYNCQNWDAIAARLGTNRSGFSICVHYHARLSDKFKRDRFEPEEDAFLMELVDSCRIGNYIPWTKVAHQFDNRTKCQIYHRYRYYLMYKNVTKGAFSEAEDVLLLCLINKFGTDFSICSRYIQNRSPMQLSHRYNNYLKRDGLNFGNWTVAEDKKILEHVRNNGPKWWGSIIGVLRRNRTHIRQRYLVLSKWLLNHPERTLEDMPRRRQSYKQKVDLQTIRATANRFKESKEIPSLETIKSHLKIVDKNIVLKVEKKETNHLIDNELIDFFQSTCKVRTGRKVTQESLQQVVNTVKAFLSLMEVTLEIPDDNTISENPLLDQLDLEILGLLKQSTNSDSHSTSIKQKDVSLPGCSQNILSASATEMSFTQCGLPQNQIALLPPNINSLVGLRKPPENLNLLNTSLEPVSEDKTEKFRRKVGRPRKDFSKINLMLKAKREKALDKQTNAQKPEADLEIKEPPKILNGLSPLQMALTNNIAPMAIEDLDLVLEYLEVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-