Pinq000658.1
Basic Information
- Insect
- Prosopocoilus inquinatus
- Gene Symbol
- -
- Assembly
- GCA_036172665.1
- Location
- CM069869.1:13102603-13103130[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.7 3.4e+03 -1.2 0.0 34 44 5 15 4 16 0.84 2 2 3.3e-07 0.00015 22.4 0.0 1 39 15 53 15 59 0.90
Sequence Information
- Coding Sequence
- ATGGTTCGTGTTTATAAAAGAAAGCGTGAAAATCCAAGTTACTCTGAGGAAGATCTAGAAGTAGCTTTACGGGAAGTTCACGCAAGTCGAATGACTGTCTACAAAGCCTCCAAAACCTATAAAATTCCATACTGTACCATTTACAGCCGTTTTAAAGGTCTTCGGGgcgtaaagaaacaaaagaaaggcaGATCAACTGCATTGGATTGGAATCATGAACTTGAACTAGCGAGAGGCATTACGACTTTAGAAAAATGGGGATTTGGATTATCCAAAAAGGAAGTTCTGCAGCTTGTTTTTCAGTTTGTAAAGGAGCACATACTTGTAAATACTCCATTTAAAGATGGCATTCCAGGGACTGATTGGTTTCTTGGTTTTAAGAAAAGACATGCTTTAAGTCTAAAAACACCACAATCCGtagaatttgcaagaaaaaaagcCACTGACCCTTTCATAATTTAtggatattttaaacttttgaaCTCAACTACAACTTCAAGAGAGGCCTTCTCAAATTTGGAACCTTGA
- Protein Sequence
- MVRVYKRKRENPSYSEEDLEVALREVHASRMTVYKASKTYKIPYCTIYSRFKGLRGVKKQKKGRSTALDWNHELELARGITTLEKWGFGLSKKEVLQLVFQFVKEHILVNTPFKDGIPGTDWFLGFKKRHALSLKTPQSVEFARKKATDPFIIYGYFKLLNSTTTSREAFSNLEP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -