Pinq008488.1
Basic Information
- Insect
- Prosopocoilus inquinatus
- Gene Symbol
- -
- Assembly
- GCA_036172665.1
- Location
- CM069871.1:51725571-51725888[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-10 5.5e-08 33.3 0.0 3 40 17 54 15 58 0.94
Sequence Information
- Coding Sequence
- ATGGTTCGGGTCTACAAACGTAAAACCACTCGGGCCGCTTACTCGGCTGAGAACTTGAAAACCGCGGTGGAACATGTTACAAGCGGAAAATGTGGCACACTACGTGCTAGTAAACTCTTCAAGATACCTAGAAGCACTCTAAAAGATCACATTAAAGGTCGCAGAGGTATAAAAAGCTCGACGATGGGAAGACCTACAGCCTTAGCAATCAAAGATGAAGAAGCTCTTGCAAATGGACCCAAAAGTCTCGAAAAATGGGGTTTTGGACTCAGCCGCAAAGAAGTCCTAGAAGTTGTGGGCAAATATGTTACACACTAG
- Protein Sequence
- MVRVYKRKTTRAAYSAENLKTAVEHVTSGKCGTLRASKLFKIPRSTLKDHIKGRRGIKSSTMGRPTALAIKDEEALANGPKSLEKWGFGLSRKEVLEVVGKYVTH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00464644;
- 90% Identity
- iTF_00002147; iTF_00464644; iTF_01257931; iTF_00423719; iTF_00423743; iTF_01210413; iTF_01210257;
- 80% Identity
- -