Pinq021722.1
Basic Information
- Insect
- Prosopocoilus inquinatus
- Gene Symbol
- lov
- Assembly
- GCA_036172665.1
- Location
- CM069875.1:49740072-49746675[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-18 1.2e-15 57.8 0.0 1 44 37 80 37 81 0.96
Sequence Information
- Coding Sequence
- ATGGCCGATCCTAGGACTACGCCTGATTCACAATTATTTgccaagaaaaaaaTGGGAAGACCAAAAGGCCAACACTCGGCTCCAAGAGGAGGTCCGCCTAGGTCCTGGACAAACGCCGAACTAACGGAGGCCCTTCAGCACGTCTGGAACAAAAAGATGACGACGAGTCAAGCGTCTCGAATATTCGGCATCCCTTACAACTCGCTGCTGATGTACGTCAGGGGTAAATACGGCAAGAGTTTGAAACTGGAGCAACTCAGGAAAGACTGCATAGGAGCACCCGGAGCACCGATGGACCTCATGAACATCGGCggcaacaacaataacaactcGTGCAAGAACGAGCGCGATTCGGATTCGATGCAGGCGAACACGAGGCCCTCGAGCACGGAAGACAACCCTCAACCCCCCGTGTTCAACCCGTTTGCGCAGAATTTCTACCCGGATTTTGGTACGGGTTTCCCGATACCTGTAAGCATGATACATCTGCTTCCTCAGAGTGAGAAGAACCGTGAACATTATAGGCAGCACCCCTCGATAGAGGATGACTGTAAAAACAGCGAGCGCGTTAAGGAAGAGCCGCAGGATTTATTCATGTCTTCGGCGCTGTCCTGCGAGGATAGGCGCGAGTTAGTGCAGCAGAATGGACAAGACTAG
- Protein Sequence
- MADPRTTPDSQLFAKKKMGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCIGAPGAPMDLMNIGGNNNNNSCKNERDSDSMQANTRPSSTEDNPQPPVFNPFAQNFYPDFGTGFPIPVSMIHLLPQSEKNREHYRQHPSIEDDCKNSERVKEEPQDLFMSSALSCEDRRELVQQNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01120789;
- 90% Identity
- -
- 80% Identity
- -