Paka003606.1
Basic Information
- Insect
- Propsilocerus akamusi
- Gene Symbol
- nfxl1
- Assembly
- GCA_018397935.1
- Location
- CM031468.1:3649805-3652485[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.51 7.4e+03 -3.2 0.3 14 18 98 102 98 103 0.82 2 18 0.44 6.4e+03 -3.0 2.0 14 19 151 156 151 156 0.86 3 18 0.7 1e+04 -3.6 2.8 1 4 189 192 188 193 0.95 4 18 3.8e-07 0.0055 16.4 14.4 1 19 201 218 201 218 0.99 5 18 0.63 9.2e+03 -3.5 1.7 5 10 243 248 243 248 0.94 6 18 0.00015 2.2 8.1 13.9 1 19 254 273 254 273 0.96 7 18 0.17 2.5e+03 -1.7 1.3 6 10 298 302 297 302 0.90 8 18 3.2e-08 0.00046 19.9 12.1 1 18 308 325 308 326 0.98 9 18 1e-08 0.00015 21.4 14.7 1 19 363 383 363 383 0.93 10 18 0.011 1.6e+02 2.2 16.0 1 18 417 434 417 435 0.91 11 18 1.9e-10 2.8e-06 27.0 10.7 1 19 444 462 444 462 0.97 12 18 0.0049 71 3.3 9.0 10 18 510 518 508 519 0.94 13 18 0.16 2.3e+03 -1.5 5.5 4 12 530 538 528 538 0.85 14 18 0.00013 1.9 8.3 6.6 1 11 609 619 609 620 0.96 15 18 0.23 3.4e+03 -2.1 1.0 6 10 636 640 635 641 0.68 16 18 0.0083 1.2e+02 2.5 16.0 3 19 649 665 648 665 0.93 17 18 2.3e-07 0.0033 17.1 10.5 1 16 717 731 717 737 0.92 18 18 1 1.5e+04 -4.7 0.9 6 10 768 772 768 772 0.90
Sequence Information
- Coding Sequence
- ATGCCTGCAAATAAATCTAAAGGTAACATTTCGTTGCTCACTCAGCCGAAGCGAAATGCAAAATTCGAAGAAATCCAGAGAAAAAATCAAGAAATATTAAAGCAACGTGTAGAAAATATGGAAGACTCTGATTCCGACGAAGAAATTGATAAAATAAAGGTAGATGCACTGTTTAAGAACTACACTGGAAACGAGAGTGACATTTTAAGAATTCAGAAATTCTTTGAGAGCGGCGAAAATATTGATTGTTTAATTTGTATTCGAAAAGTTAAAGCCAAAGATAAGATATGGAACTGTAAAAGTTGCTATTGCTTCTTTCATCTATTGTGCATTCAAAAATGGGCCAATGACTCAATGAATCAAAAACGTTTATATGCAGATAATCAACCTGCCGGCTACTACAGCAACACTGGAGTATTTGTCCAACGAAAATTAATTTCTATCTCATGGGATTGTCCTCAGTGTCGTAAGTCTTATGAGTCGGATGAGATTCCCAGACATTATGAATGCTACTGTGGAAAAGAAAGAGATCCCTTGTATCAAGACTGGATCCCACCTCACAGTTGCGGAAATCATTGTGGAAAAGAGCTCCAACCGAAATGTGGGCATCGATGCGTCCTACTTTGCCATCCCGGCACATGTCCTAGCTGTCCTCAGATAATTCAAAAATCCTGCAAGTGTGGAAAATCACCAATTAAAACTATTCGGTGCTCACAGCAAAGCTGGACTTGCGCTCAGAAGTGCTCAAAGCTCCTTTCATGTGGTATCCATAATTGTTCTGGTACTTGCCATGGACTAAATGAATGCCCACCATGCACGAAAACTAGTAAGAAGCCATGTGCATGCGGAAGTCAATTGAAAGAAATCAGTTGTGAAAAGAAAACTTGGAGTTGCCAAAAGGTTTGTGGGAAATCATATTCATGTGGTCTTCATTCGTGCTCAAAAACTTGTCACTCTGGAGAATGCGGCGATTGTGTATTTGGCCTCACTAGAACTTGTTATTGTGGAAAACAAACTTACTTAGCAAACAGCTGTAAAGAAGCCCCCTTAGAATCATGTGGAGACACTTGCTTTAAAGTATTAAGCTGTGGTAATGTTAATCATAAATGCCAGCAACGATGTCATAAAGGAGAGTGTGGCCCATGTACGGAACTTGTTGAAAAGAAATGCAGATGCGGAATGAGTTCGAAGGAAAATCCTTGCTCAAAAGAACTTCTGTGCGAAATCAAATGCAAAAATATGAAGTCCTGCGAAAAGCATAATTGCAACCGGAAATGCTGTGGAAATGAATGTCCGCCATGCGATAAGATTTGTGGCAAAACCCTCTCTTGTGGTAAGCACAAATGTTCTGCTTTATGTCACGATGGCAGATGTTATCCTTGCACGCTAAAGCAACAAATTAAATGTAGATGTGGCACTACGACAATATCCGTCTTATGTGGACAAGCGAAAAAGAACAGATATCCAAAATGTAGAGAATTCTGTAAATTGCCATCAAAGTGTCACCATGAGAATTTGCCACATCATTGCCATCCGGGAGATTGTTCCAGTTGTGTTCAAATCTGTAACGAAGAGTTACCATGTACGCATTTGTGTTTATCAAAATGCCACGATTATGTGAGAATTGTTACCAAAGATAAGAATTTTGTCAAAGCTGGCCCTTGGGACTTTGCAGAGGAAAAGGTTGAAATGAAGAAGCTACCACATCCTCCGTGTCTTACTTTAGTGCCTGTCGTCTGTATAGGGGGACATGAGACTATGAATATGGAATGCTGTCAAGCAAAATCAAGATCATGCGGCCGTCAATGTGACCGATTACTGACATGCTCCAATCATCGATGCACGAATATCTGTCATCAAGTATCAGATGTTGAAAGCAAGGTCCAAGATGAAAACTGCGATGATTGTCAATCGCCTTGCACTTTAGCAAGACCAATAGGTTGCAAACATTCTTGTCCTAAATCATGTCATCCAGCACCTTGCAAAAAATGTCAAGTTCAGATAAAATCGAAATGCTTCTGCGGACTTACAGATGTATACTTTAGATGCTGTGATGTATACAAACGAAAATCCAATTGCGAAGAAGATATTGAGAATTTGAAACATAAATATTTATGCTGTGGATCAAAATGCATAAAGAATTATGCATGTGGACATCAATGCACTTCAATCTGTCATCCTGGAGACTGTCCTGATGCTGATTTATGTTCCAGAAAAGTAAAGTTGATTTGTGCATGTAAAACTCGTCGAATGGAAATAACATGCGACAAAGTGAGAGCAGAAAAAATAACATCAATTGCATGTGACGAGACCTGTGAGTCTAAAAGGCGTATAGCCGAAGAGGAAAAAGAAAACATGTTAAAGGAGAAGTTGAGAGCAGAAGCTGAAAAGAATCAGCGTGAGCTTGAAGAATTTGAAAAGAAGTTTGGCAAAAAGAAATATAAAGAACGCAAAAGGAAAGTTGTTGAAGAGGAAAAAGATAACAAAAAGCTAATAATAATATCTGCATTAAGTGTTCTATTGATATCAATGACAATTTATTTTATTCTTGCATGA
- Protein Sequence
- MPANKSKGNISLLTQPKRNAKFEEIQRKNQEILKQRVENMEDSDSDEEIDKIKVDALFKNYTGNESDILRIQKFFESGENIDCLICIRKVKAKDKIWNCKSCYCFFHLLCIQKWANDSMNQKRLYADNQPAGYYSNTGVFVQRKLISISWDCPQCRKSYESDEIPRHYECYCGKERDPLYQDWIPPHSCGNHCGKELQPKCGHRCVLLCHPGTCPSCPQIIQKSCKCGKSPIKTIRCSQQSWTCAQKCSKLLSCGIHNCSGTCHGLNECPPCTKTSKKPCACGSQLKEISCEKKTWSCQKVCGKSYSCGLHSCSKTCHSGECGDCVFGLTRTCYCGKQTYLANSCKEAPLESCGDTCFKVLSCGNVNHKCQQRCHKGECGPCTELVEKKCRCGMSSKENPCSKELLCEIKCKNMKSCEKHNCNRKCCGNECPPCDKICGKTLSCGKHKCSALCHDGRCYPCTLKQQIKCRCGTTTISVLCGQAKKNRYPKCREFCKLPSKCHHENLPHHCHPGDCSSCVQICNEELPCTHLCLSKCHDYVRIVTKDKNFVKAGPWDFAEEKVEMKKLPHPPCLTLVPVVCIGGHETMNMECCQAKSRSCGRQCDRLLTCSNHRCTNICHQVSDVESKVQDENCDDCQSPCTLARPIGCKHSCPKSCHPAPCKKCQVQIKSKCFCGLTDVYFRCCDVYKRKSNCEEDIENLKHKYLCCGSKCIKNYACGHQCTSICHPGDCPDADLCSRKVKLICACKTRRMEITCDKVRAEKITSIACDETCESKRRIAEEEKENMLKEKLRAEAEKNQRELEEFEKKFGKKKYKERKRKVVEEEKDNKKLIIISALSVLLISMTIYFILA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -