Paka011680.1
Basic Information
- Insect
- Propsilocerus akamusi
- Gene Symbol
- zfh2
- Assembly
- GCA_018397935.1
- Location
- CM031469.1:24437428-24454388[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.15 7.5 7.0 0.7 2 23 316 338 315 338 0.95 2 14 0.00013 0.0062 16.6 1.4 2 23 702 724 701 724 0.96 3 14 3.2e-05 0.0015 18.5 0.7 1 23 756 780 756 780 0.92 4 14 0.01 0.49 10.7 0.4 1 22 849 870 849 873 0.91 5 14 1.2 61 4.1 1.9 1 23 1069 1093 1069 1093 0.91 6 14 4.7 2.3e+02 2.3 2.0 2 23 1309 1331 1308 1331 0.88 7 14 0.0016 0.079 13.2 0.7 2 20 1479 1497 1478 1501 0.93 8 14 6.2 3e+02 1.9 0.1 1 23 1545 1567 1545 1567 0.93 9 14 0.17 8.3 6.8 1.7 1 23 1578 1603 1578 1603 0.90 10 14 0.00034 0.017 15.3 1.3 1 23 1616 1638 1616 1638 0.97 11 14 7.9e-05 0.0039 17.3 1.3 2 23 1645 1667 1644 1667 0.94 12 14 0.0034 0.17 12.1 4.8 1 23 1738 1762 1738 1762 0.92 13 14 0.011 0.53 10.6 0.6 1 22 1783 1804 1783 1807 0.89 14 14 0.0049 0.24 11.7 0.1 1 23 1880 1904 1880 1904 0.93
Sequence Information
- Coding Sequence
- ATGTTGTCGCAAGTGAGTGCTTCAGACTGGACATCAGCTGGCGTGCTACTTTATGGTTATTATGATGCAGCCAATGCTCTACTGACCATTACCACCGCCACGGAGTCGATTCAATTCGACGGCCGAGCAATATCGCTCGGCTCCGGGACTGGCACAATACATGTCCCATCATCACCATCCGCAACATCACCGACTCAAGCTCTACATGAGTCAACGACCGATATCAATTTGAATGTTTTAAGGAGTGAAACGCCCTCGGCAGATGATCAACAAACATCATCCGCACAAAAGAACAATGATGCTGGTCAATTAAAAAAAACATCGTCGCCATCATCAATTTTCGATCGTAATTTATTGCAACAAACGCAAAACATATTAAAATCACAAGCGACGAAGCAATTGGATATGCCACCGCCAACACCCGACTCGCCAGCTGGACCATCACCGAGAAAACGTAGAAGAAAGCGTGACGATCCTCAAAGTTGTGTCACCAATTCTGAGGAATACGATTCAGATGAAGCACCAGTATCATATGCCGATGTTGAACGGTTTCAGGGCAAAATTGTTTATAATTTAGACGGTAAAGCATACATAATTGATTCGGAGAACGAGTTAGCAGCGCTGCAGTTGTCTGATAGTAGTATTAAAGATGTATCACAATCAAATAATCCAAAAATCCATTCGTTTCGTGTCATCTCATCGCGAGATGCAACAATGAACTCGGCCAGTACAGCACCAACAACAACGATACCATCAAACGTTACCACATTCACCTCAGCATCAATAAATAATCAGTTTCAAACGTCATCAGATCCCTCGCCATGCTCAACGCCAACAATTGAACACCAACAATTAGTGGACGATAACAACAAGAAATCATCATCATCATCAACATCTGATAACAATCAGCATCATCAACAACAGAAACAACAAAAGCCCATATTGATGTGTTTCATTTGTAAATTGAGCTTTGGCAATACCAAATCCTTCTCGTTGCATGCCAATACTGAGCACAAACTGAATTTGAGTGAAAGTGAAAAAATGCTGCTGTGCCGTGAATATTCTAGTGCTATTATACAGAAAAATAATGATAATGAAAATTCACAAATATCATTTTTAGAGCCGCTCGAAATAACGAAATCAATGAATTTTTCATTAAATTATAATAGTAGTAATTCTAATGATATCAGTAAAAATAATGGTAATAGTTTAAGTGATGAATCCACAACGGAGAACAATGATAACAATAACAATTCAAATCAACATCAACGCGCAACAAATGATGGCGATGGCTACGATGACGATGATCAAATGATGATAACATCGAATGATGATTGTGCACAACAATCAAATGATAAGACAGATATCAAGGAAACATCATCATCCGATGATCGTCATCCAAAATTGACGCCAAAATCATTGTCATCGCTCACGCGTACCAGTCCACAATTGTTGCATCCATCACCTCCAGCATCCGCTGCATTGGCGGCAGCGAATGTTATTCAACGATTAGCCGCCGCAACTGGTGGCGATTTAAAGTTCCTCAACAATTCAGCCGATTTGAGTAATCTAACAAGTCTGTTAGAGCAAACAAAGACGCTGAATGATTTCCTAGCACAACAGCAACAACAACATCAACAGCAACACAATCGTCTTGCATGTCCCGAGCACATAGACACACAAAATCTCAACGATGTTGATTGTAAAAATTGTGAATTTTTAAACATCAATCATATGTCGAGTGCATCATCGCCATTAAATTGTTCCAACTCAAAGTCGCCAATGAAAATCTTTGGTGGTCCCCAACAACAGCAACAACAACTTCAACATCATCAAACTGAGTCGAATGCTTCATCGGCTTCATCTACCACATCATCACCCGTAACATCATCAGTCACACCGAATTCTGCACAACTCTTACATCAATCGGCACTCAATCAATCCAATATAAATACATCGCCGAGCTTCACAATTGGAGCGTGTCCCGATCACATGAATGGAAGACCAATTGGCATCGATTGTGCAAGATGTGAACTCCTTCTCAATTCCGCCCGTCTCAATAGTGGCGTCCAGATATCAACGCGCAATTCATGCAAAACGCTCAAATGTCCACAATGCAATTGGCATTACAAATATCAAGAGACACTCGAAATTCATATGCGCGAGAAACATCCCGACGGCGAAAGTGCATGCGGTTATTGTTTGGCGGGCCAACAACATCCACGACTTGCCCGTGGTGAATCATATACATGCGGCTATAAACCATATCGTTGCGAGATTTGCAATTATTCGACAACAACCAAAGGCAATTTGTCCATTCATATGCAAAGTGATAAGCACTTGAATAACATGCAAGAGCTCAACAATTCACAAGGCATCGCTCAGCCGCCGGAAATACGTGAATCGCCAAAAGGCGTTATGGGCTCTATGAGTTCAAGTGGTGCTGGACAAGTGACACAGCAACAACAACAACAACCACCATCGGCACCGCCATCAGCGCCAACAACGCCATTGCAACAGCAACAGTCGAAACCAAAACCAAATTTTCGTTGTGATGTATGCTCATATGAGACAAGTGTGGCACGCAATTTGCGAATACACATGACAAGTGAGAAGCACACACATAACATGGCAGTGTTGCAGAACAATATCAAACATCTGCAGGCGCTGACATTTCTTCAGACACAAAATCTTGGACATTTGGGCGGATTGGGCTCATTGGGTGGTGCCGGTTCACCAAATGTCTCACAAATTGTGCCATCACTAGCGCAATCAGCACAATCAGGATTGCCATCGAATGCTGGACATTTGCCCGAAGCAGCATTGGCTGATTTAGCATATAATCAAGCACTGATGTTTCAATTGCTTCATCAGAATTCTGGCGGTTTAAATAATGCCAATGGTGGAAGTGTTTTATCGATGGCACAACAGCAAGCACAAAATAGCCAATCAAATCAAATTCTCCAGCAAGCACAACAGCAACAGCCAAATGGTACAACATCAGTGCAGGACATTGATCAAGGACTGAATCCGGAAACACTTGAACCACCTGTCGAACAGGACTTTAATCCGCATGCTCTTTTCTCGTGTCTCATTTGCGCTGAATTCAATACAAATAGCCTCGATGAGCTCAATAATCACATCATGATGGACCGATCGCGTAATAATTGCACGCAGGATATCACAACAATTATCAATAATAATTACATTTGTCGATTGTGCAACTATAAAACAAATCTCAAAGCCAATTTCCAATTGCACAGCAAGACAGACAAGCATTTGCAGAAGCTCAATTTCATCAATCACATAAAAGAGGGTGGCTTGAGGAATGAATATAAGCTCAAATATATCACAACATCGAGCACAAATAATAACAATTACAATATTATTCAATTGAAATGTAATTGCTGTGACTATTACACAAACTCCATACAGAAGCTCAATTTGCACATTCAAAATGTCCGCCATGATAATATGAAAATTATATTTAATCATCTGATACAATTGTGCAAAGACTTTAAGAACAGTCAAATTGACGGTACCGAAACAAATGTCAATAAAGCACTGTTTTGTCAATTGTGCAACTACAAGTCGAACAATATTTTGGGCATCGTGAAACACATCAAGAGCCTAAGACATATCCAAATCGAACAAATTTATTGTTTACAACGACGCTGTGAGAACCTTGAGAATCTTGAGCTGGGCGATATTATTCAGTTGATTGACGATGTCGGCTCAGATTCATCATGTCTTGACGATGAGAAATTGACAATGTCGCCATCGAGGAATACAACACCAAAAAGTCAAAAAATGCAAGAAAGCGAAAACTTCCGATCATCAACGCCCTTGAGCGCTTTGAAGATGGTTCCAGTTGAACAACTTCAACAACTCGCAAGCACACTGCCACCATCACAGACAATTCTTAAGTGTAATCAATGTGATCATTTAACAGAATCTAAAAATGAAATGGAGCGACATTTTGATCAGCAACATCCAAATAATTCCGATTGCAATGCATTAGTTTTACCATCGATGGCTGCACTTATGGCAGCAGCACAAATGAATTATCAACAGCATGATTCAAAAATGGATAGCTCGATAAAGAACGAAATGGACACAATGTCGATTGATGACGATAGCAAATCAATGGCTGGTGAAGATTTAGGTGATAAAATGCTCGACAGCAGTGACAAAATGAAAGGAAATTGCGAAACTGATGTTATGACGATTGAGCCCGATATTGATGGTGTTATGATTAATAATTCATCACGTTCATCTTCCGCTGTGTCAATGCTTCATCCCGATGATGTCGATGACAAAATATCTTCATCAGGTGCCATGCGAACGACACCACAAAATCAACAAATGCAAAAATCTCATCAACAAGCGAGTTCACCATTTTCAACGTCATCAGCAGCTGATGACTATAGTGTCATGTGTCCATTATGTCAGGAATCATTTACTGATCGTAAATCTTTGGAACAGCATGTTATGTGCATTCATAGTGTTAATGCTGATGGACTCAATCGACTTCTTCAACTGGTTGACACGAGTCATTGGCTGAATAATAAAAAGAGTCCCGAACGTAGCACAAGTGCTGGTGGCACACAAAGCATTATGTCAGGCACCGAATATGAATGTCTGATTTGCTCCGATTCCCTTAAGAGTCTCAATGATTTATTGATGCATGCGAGTGAACACCAGCACTTCAACATGACCGGACTAAATCAGTTCACATGTTTATTGAAGTCGTGCAATCAACGTTTCACAAGCGAGTCACAGGTACAACAACATTTCCGTGATTCACATTTGAATATTGTCATATCTGAACGACACGTGTACAAATATCGATGCAAATTGTGCTCACTTGCATTTAAAACGCAAGAGAAATTGAACAATCACGCGATGTATCATACGATGCGTGATGCTACGAAATGTAACATCTGCAATCGCAATTTCCGCAGCACCACATCATTGCAACGCCATATTGAACAAGTTCATTCATTGCCAGCACAAGATTTAAACAAATCAACCGAATTAACTGACGACGAACGCATTCAGAGTCCTCATGATGATGTAGCGTCTAATGTCGATTCACGTGATGATGATTTTCAACAAGATGACTCTGCAGGCGATCAGGATATTAGTGAATTCGATGAATATATGAACAGCGAACAGATGGCAGAAGAACAATACACCAGCAATCGAAAATTTAAATGCCATAAATGTAAAATGGCATTCACGCAATCGGTATTTTTGAATCAACACTACAAATCACAGACGCATCGTCGCAATGATAAACTCACAAATTATCCAATGGAAAAGTATCTCGATCCGAATCGTCCATTTAAGTGTGAAATTTGTCGCGAGAGTTTTACGCAAAAGAATATTTTACTAGTCCATTACAACAGCGTATCACATTTGCACAAGCTGAAGAAGCAACAAAATGACACGCACAGTGGCAGTTCAACGCCAGCATTATGCACAAGTCCGAATCAAATGAATGATTTTGATCGTAAAAGTGTCGATTTTGATAGAAAATCGATTGACTATGAAATGGAGATTTCCAATTCAGTTGGCGAAACTAATAAGCGTAAATTGTCATCTGATAACGACTATGACAGTCCAAAGAAGCGATTCAAATGTGACATTTGCAAAGTCGCATATGCTCAAGGTTCTACACTCGACATTCACATGCGCAGTGTTTTGCATCAGACGCGCTCTTGTCGTTTGCAGGAGCAACAACAAAAATTGCAAGCTCAACAAGCACAATTGCAAACAACAAGTCCCAATTTGTCGCAATCCCATGAGCTATTCCAGCAGCAACAATTGCCAGCCAATAATGGCAACGAAATTTCACCCAAACTTGCCAACAATCAAAATCAGATGTACAAAACATTGCTCGAGAATTTGGATTCGATGTTGTGA
- Protein Sequence
- MLSQVSASDWTSAGVLLYGYYDAANALLTITTATESIQFDGRAISLGSGTGTIHVPSSPSATSPTQALHESTTDINLNVLRSETPSADDQQTSSAQKNNDAGQLKKTSSPSSIFDRNLLQQTQNILKSQATKQLDMPPPTPDSPAGPSPRKRRRKRDDPQSCVTNSEEYDSDEAPVSYADVERFQGKIVYNLDGKAYIIDSENELAALQLSDSSIKDVSQSNNPKIHSFRVISSRDATMNSASTAPTTTIPSNVTTFTSASINNQFQTSSDPSPCSTPTIEHQQLVDDNNKKSSSSSTSDNNQHHQQQKQQKPILMCFICKLSFGNTKSFSLHANTEHKLNLSESEKMLLCREYSSAIIQKNNDNENSQISFLEPLEITKSMNFSLNYNSSNSNDISKNNGNSLSDESTTENNDNNNNSNQHQRATNDGDGYDDDDQMMITSNDDCAQQSNDKTDIKETSSSDDRHPKLTPKSLSSLTRTSPQLLHPSPPASAALAAANVIQRLAAATGGDLKFLNNSADLSNLTSLLEQTKTLNDFLAQQQQQHQQQHNRLACPEHIDTQNLNDVDCKNCEFLNINHMSSASSPLNCSNSKSPMKIFGGPQQQQQQLQHHQTESNASSASSTTSSPVTSSVTPNSAQLLHQSALNQSNINTSPSFTIGACPDHMNGRPIGIDCARCELLLNSARLNSGVQISTRNSCKTLKCPQCNWHYKYQETLEIHMREKHPDGESACGYCLAGQQHPRLARGESYTCGYKPYRCEICNYSTTTKGNLSIHMQSDKHLNNMQELNNSQGIAQPPEIRESPKGVMGSMSSSGAGQVTQQQQQQPPSAPPSAPTTPLQQQQSKPKPNFRCDVCSYETSVARNLRIHMTSEKHTHNMAVLQNNIKHLQALTFLQTQNLGHLGGLGSLGGAGSPNVSQIVPSLAQSAQSGLPSNAGHLPEAALADLAYNQALMFQLLHQNSGGLNNANGGSVLSMAQQQAQNSQSNQILQQAQQQQPNGTTSVQDIDQGLNPETLEPPVEQDFNPHALFSCLICAEFNTNSLDELNNHIMMDRSRNNCTQDITTIINNNYICRLCNYKTNLKANFQLHSKTDKHLQKLNFINHIKEGGLRNEYKLKYITTSSTNNNNYNIIQLKCNCCDYYTNSIQKLNLHIQNVRHDNMKIIFNHLIQLCKDFKNSQIDGTETNVNKALFCQLCNYKSNNILGIVKHIKSLRHIQIEQIYCLQRRCENLENLELGDIIQLIDDVGSDSSCLDDEKLTMSPSRNTTPKSQKMQESENFRSSTPLSALKMVPVEQLQQLASTLPPSQTILKCNQCDHLTESKNEMERHFDQQHPNNSDCNALVLPSMAALMAAAQMNYQQHDSKMDSSIKNEMDTMSIDDDSKSMAGEDLGDKMLDSSDKMKGNCETDVMTIEPDIDGVMINNSSRSSSAVSMLHPDDVDDKISSSGAMRTTPQNQQMQKSHQQASSPFSTSSAADDYSVMCPLCQESFTDRKSLEQHVMCIHSVNADGLNRLLQLVDTSHWLNNKKSPERSTSAGGTQSIMSGTEYECLICSDSLKSLNDLLMHASEHQHFNMTGLNQFTCLLKSCNQRFTSESQVQQHFRDSHLNIVISERHVYKYRCKLCSLAFKTQEKLNNHAMYHTMRDATKCNICNRNFRSTTSLQRHIEQVHSLPAQDLNKSTELTDDERIQSPHDDVASNVDSRDDDFQQDDSAGDQDISEFDEYMNSEQMAEEQYTSNRKFKCHKCKMAFTQSVFLNQHYKSQTHRRNDKLTNYPMEKYLDPNRPFKCEICRESFTQKNILLVHYNSVSHLHKLKKQQNDTHSGSSTPALCTSPNQMNDFDRKSVDFDRKSIDYEMEISNSVGETNKRKLSSDNDYDSPKKRFKCDICKVAYAQGSTLDIHMRSVLHQTRSCRLQEQQQKLQAQQAQLQTTSPNLSQSHELFQQQQLPANNGNEISPKLANNQNQMYKTLLENLDSML
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -