Basic Information

Insect: Propsilocerus akamusi
Gene Symbol: ush
Assembly: GCA_018397935.1
Location: CM031468.1:7224260-7229257[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0044 0.21 11.8 0.1 1 20 199 218 199 220 0.93

2 8 0.00029 0.014 15.5 0.8 1 23 258 280 258 280 0.98

3 8 0.02 0.99 9.7 1.4 2 21 319 338 319 339 0.92

4 8 0.055 2.7 8.4 3.3 2 21 693 712 692 713 0.94

5 8 0.00071 0.035 14.3 0.0 3 21 751 769 749 770 0.91

6 8 0.00081 0.04 14.1 0.0 1 23 817 839 817 839 0.98

7 8 0.013 0.66 10.3 1.4 1 23 845 867 845 867 0.99

8 8 0.25 12 6.3 0.6 2 21 1045 1064 1044 1065 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0044	0.21	11.8	0.1	1	20	199	218	199	220	0.93
2	8	0.00029	0.014	15.5	0.8	1	23	258	280	258	280	0.98
3	8	0.02	0.99	9.7	1.4	2	21	319	338	319	339	0.92
4	8	0.055	2.7	8.4	3.3	2	21	693	712	692	713	0.94
5	8	0.00071	0.035	14.3	0.0	3	21	751	769	749	770	0.91
6	8	0.00081	0.04	14.1	0.0	1	23	817	839	817	839	0.98
7	8	0.013	0.66	10.3	1.4	1	23	845	867	845	867	0.99
8	8	0.25	12	6.3	0.6	2	21	1045	1064	1044	1065	0.91

Sequence Information

Coding Sequence: ATGCCAGTCGATGGAAAATGTTTCAAGAAAAATAAAGAAAATTTAAGAAGAGATGATGAAGAGTTGGCGGGCGAGGAGAATACTGCACCATCACAAAACGAACAGACAGCAACGACAACAACAACTGAGGAGACATCAGAAGCTCAATCACCAAAAAGTGAATCGTCAATGAACAATTCACCAGAACCGCCATTAGAGAATCGTCCAGAATCGCCAGTAAAATCAAGAAGTGGCGAAAAGCGACCGCTTGAAAGTGACGCCGAATCCGATTCACTAATACCGACAGCAAAAATAATGCCAACATTAAGACTGAATATAGCATTAGCTTCTGATCCAGCTACAAATCCGGATGCTAAAGAACTTCTCAATATTCATGTAAAAACAGAACAAAATCGCAACGATGTTGATGATGATGAATTTATTAGCAATCACGGAGATGCTGAAATAGCACAAGAAACAATTAATCAGAAAGCTTTACATAAAGCTCAGCAACAGCACCAAAACATAATTCAACCACCAAAGGCTAAAGAGAACATTAACAATGTTAATCAGCTTCTCGCTAAAAATCTCGAATTATTGCCACGACCAAATGTGTTCATGTGCACGCCATGTGGAATAAGATTCTCATCACTTTCGACTCTGGAAGCTCATCAAACGTACTATTGCTCACATCGAAAGAATGCCGATGAAAATACACAAAAAGATGGCGGAGCAACAGGCGATGTTAATGGCAGTGAGCCACCAACAAAGTCCATCAAAACAGGAAAGCAATATGCATGCACACAGTGCTCGTATAGTGCTGATAAGAAAGTATCACTCAATCGTCACATGAGAATGCATCAAACATCACCAGCACCAAGTTCAACGACATCGAATGGCGATGAAAATCCTAGTCAAGTTGTTGTTCAACAAATAATTGGCGCTCCACCAGCACAACCGATCGTCGTTGATCGATATTGTTCGGATTGTGACATTCGATTCTCAAGCACAAAAACTTATCGTGCACACAAACAACACTATTGCAGCTCGCGGCATCGGGAAGGACAACCTCCAACAACTCCAGTGCCAGTCGTAAAACCTCCAAGTCAGAAATCAGGATCTCAAAGTCCACCAGAGGCTGCAAAGACACCGCCAGTACCATCACAACCATTTCTGGCATTACCAACAAATCCAATTATTATCATTCCGTATTCATTAATAAGAAATGCGAGCATCATTCCAGGACCATTGACAACTATTGCACCAAATGTCGCAAATCCTGATTCAGCATGTTTCATCTTCCAAAATGGCTCTCTTCAACCGATCGCTTACTCATTGGCACCAGTTCCTTCATCATCATCAAACGCCAGCTCACAGCCTCTGCAACCAGCAACAGCATCATTGTCAAGGACACCAAGTGTCACACCGCAAGCTCCACAAAGCGAGATAAAATCAAATAAAGCTAATAATTCAAATATTTCATCAAGTAGTCAAACTGGCGAAGTCTTGAAGTCAGTCAACAAGCGCGACGCCACTGGCACAAATCGGGAAACTTCAACGCCACTTGATCTCTCCATTCGTCGAATGTCACCCGGATCAAATTCACGCGAGCGTAGTTTATCACTTTCATCAGCAATCTCAGCCGATCAATTTCGTATGGAATTCGATGCGATGATGGAAGGCAAAGAGAATCGCTCAGTTAGTGGCGATTCAATAACACCAGAACAAATTGTTTGTGCACCATCATTGCCTGGCAGTCCGCCATTGACGCCATCACCAAAACGACGTTCAAATAGTCCACGTGGAAGCAGCGTATCGATTTCACCAAACTCATCAGCCTCACACTCAATGTTGATGCGTCCATTGCTACCTGCTGACATTGCTTTGCGCTTATCTGATCCTGCACTTAATGTTATTCCACCACAAATGTTGGTCAAACAGAGTATGGAACTTGCTTTGCGATTATCATCGTCTGCTTCAGTTGAGCCCACCAACGCACAACAAATATCGCCATCGCAAGTGATCGCATCACCGTCGGGCATTGCAACAACGCCTACACCATTACCACCACAAATATTTGTTAAAACTGGCATGTCGAAATGTAAAGAGTGCAACATTGTATTTTGCAAATATGAAAATTATTTGGCACACAAGAAACATTACTGTTCAGCTCGCAATCTTGAAGATACCGAGACTGCTGCAAAGTCGAGTCCATCAAATTCACCACCAGCTACAAGTCCTGGTGCTCCTTTAGCGTATCAGCAGCTCATATGTGTAGCATGTGGCATTAAATTTACGTCATGGGATAATTTAAACGCCCATCAAATGTATTACTGCCCCAAGCGCAGTGAATTGCAAGCGCAAGCCAGTTCTTTGGCTGCTGCTGTATCGGCACATAAGGAAAAATGTTTAAAATGTAAAACATCGCATGATCCATCGCAGCCATGTACAATCGCCGGACAAGGTGCCTACAAGTGTCCAATTTGCGAAGTGATAAGTCCCAATTCGTCAGAAGCGCGACGACATATGGAATCGCATGGTGGCGTAAAAGCATTTCGATGCACAATTTGTAGATACAAAGGAAACACATTGAGGGGAATGAGAACGCACATCAGAATGCATATCGATCGAAAAGCTGGCGATGTTAATGAGGAGAATTATATTTCCTGCATTTTAGATGACGACAGCACTGAAATTCCACCAGCAGCTGCCGTTAATAAAAATCCATCCCCAATTAGCAGTGAAACGAAAGTGATAAAACATGGCAAAGTCAGTAAATCACCGGAAGTTGCTGAAGAAACAATTACTCGTAATGGAACATCTGAAGCTGCCATCGAAGCAAGCTCAATAAAATTAGAACCAGACGATGGATCACAAGAAGCTTCGTCCAAGGAAAACAATGACATCATTATCGATGAACCTTCATTAATTCCCGAAAATATTATCAAAGTTGAGATTCGTGATAAGAATGATACTCCATCGCCATCTCCTTCTCCTAAGCTCCAAAAGCATCATCAAAAGCTGTCTAATGTTCATTTTTCGCCACCCAAAATTACATCACCCAGCGAAGCACTACGAATTCAATCACCAGCAACGAGCGTCATCCAGATGCAAACCACAAGTCCACCAATTGTGTCGCCGAATGGCTCTAAATATTGTAGCACTTGTGATATCAGCTTTACATTCATGAACACTTATATCGCCCATAAAAAATTCTACTGCAAAGCTAATAAAGTCGATCGCCCAAACAGTAATGGACAATCACCGAGCAACTCTAATGTTGTAGTGACGCTGGCTGCTGAAACGTCTGTTTTGTAG
Protein Sequence: MPVDGKCFKKNKENLRRDDEELAGEENTAPSQNEQTATTTTTEETSEAQSPKSESSMNNSPEPPLENRPESPVKSRSGEKRPLESDAESDSLIPTAKIMPTLRLNIALASDPATNPDAKELLNIHVKTEQNRNDVDDDEFISNHGDAEIAQETINQKALHKAQQQHQNIIQPPKAKENINNVNQLLAKNLELLPRPNVFMCTPCGIRFSSLSTLEAHQTYYCSHRKNADENTQKDGGATGDVNGSEPPTKSIKTGKQYACTQCSYSADKKVSLNRHMRMHQTSPAPSSTTSNGDENPSQVVVQQIIGAPPAQPIVVDRYCSDCDIRFSSTKTYRAHKQHYCSSRHREGQPPTTPVPVVKPPSQKSGSQSPPEAAKTPPVPSQPFLALPTNPIIIIPYSLIRNASIIPGPLTTIAPNVANPDSACFIFQNGSLQPIAYSLAPVPSSSSNASSQPLQPATASLSRTPSVTPQAPQSEIKSNKANNSNISSSSQTGEVLKSVNKRDATGTNRETSTPLDLSIRRMSPGSNSRERSLSLSSAISADQFRMEFDAMMEGKENRSVSGDSITPEQIVCAPSLPGSPPLTPSPKRRSNSPRGSSVSISPNSSASHSMLMRPLLPADIALRLSDPALNVIPPQMLVKQSMELALRLSSSASVEPTNAQQISPSQVIASPSGIATTPTPLPPQIFVKTGMSKCKECNIVFCKYENYLAHKKHYCSARNLEDTETAAKSSPSNSPPATSPGAPLAYQQLICVACGIKFTSWDNLNAHQMYYCPKRSELQAQASSLAAAVSAHKEKCLKCKTSHDPSQPCTIAGQGAYKCPICEVISPNSSEARRHMESHGGVKAFRCTICRYKGNTLRGMRTHIRMHIDRKAGDVNEENYISCILDDDSTEIPPAAAVNKNPSPISSETKVIKHGKVSKSPEVAEETITRNGTSEAAIEASSIKLEPDDGSQEASSKENNDIIIDEPSLIPENIIKVEIRDKNDTPSPSPSPKLQKHHQKLSNVHFSPPKITSPSEALRIQSPATSVIQMQTTSPPIVSPNGSKYCSTCDISFTFMNTYIAHKKFYCKANKVDRPNSNGQSPSNSNVVVTLAAETSVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -