Basic Information

Insect: Propsilocerus akamusi
Gene Symbol: -
Assembly: GCA_018397935.1
Location: CM031470.1:5443339-5445172[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.016 0.77 10.1 3.1 1 23 220 243 220 243 0.92

2 10 7.7e-06 0.00038 20.5 0.5 3 23 259 279 257 279 0.95

3 10 0.0011 0.052 13.7 1.8 1 20 296 315 296 317 0.94

4 10 0.00051 0.025 14.7 1.8 1 23 334 356 334 356 0.97

5 10 0.53 26 5.2 0.8 1 23 390 413 390 413 0.96

6 10 0.0011 0.055 13.7 1.4 2 23 420 441 419 441 0.97

7 10 0.58 28 5.1 3.4 1 23 449 473 449 473 0.95

8 10 0.00018 0.0086 16.2 5.4 1 23 479 501 479 501 0.98

9 10 0.00025 0.012 15.7 1.2 1 23 507 529 507 529 0.95

10 10 0.0013 0.063 13.5 0.3 2 23 537 558 536 558 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.016	0.77	10.1	3.1	1	23	220	243	220	243	0.92
2	10	7.7e-06	0.00038	20.5	0.5	3	23	259	279	257	279	0.95
3	10	0.0011	0.052	13.7	1.8	1	20	296	315	296	317	0.94
4	10	0.00051	0.025	14.7	1.8	1	23	334	356	334	356	0.97
5	10	0.53	26	5.2	0.8	1	23	390	413	390	413	0.96
6	10	0.0011	0.055	13.7	1.4	2	23	420	441	419	441	0.97
7	10	0.58	28	5.1	3.4	1	23	449	473	449	473	0.95
8	10	0.00018	0.0086	16.2	5.4	1	23	479	501	479	501	0.98
9	10	0.00025	0.012	15.7	1.2	1	23	507	529	507	529	0.95
10	10	0.0013	0.063	13.5	0.3	2	23	537	558	536	558	0.96

Sequence Information

Coding Sequence: ATGTCGATAGATCCAGCGAATTCGTGTCGTATTTGCATGATAAGCGACTGCAATCTAACATGTATTTTTGAGGAACATGATGGAAAGCCAATAAATGAAATAATAAGCGAAATAAGTGGAGTTATTATTGAGAAAGATGATATGCTTAGTCAGAATATTTGCGAAGAATGCAAAATTAAAACACTTGAGCTTTTTGCTTTTCGTCAACTTTGCATTGATTCGGATGAGACTATGAGATACAATTTGCTGTTAGCAGAACAATCTGAAAATGCATCCGAGGAAGACTTGTCACCGATAGCATCAAAACATCATGACACACCTGGTGAAGAAATGGAAGAATTCTTTATAGATGATGAAGATGAACCTTCTCAGTTTAGTGGGAGCAGTGAACAAAGGGAATATGATAAGCTCTTTATGGAGAACGAAGTTGAAGATGATGATTCTCAAACGATACAGGATTCCATCGAAGAAGTTCCTGAAGATGATGGAAAGTTAAATAAGAAAGATGATGGCACAAACATGAAGGAATCTCAATCGGTTACCATCGAACGAGTCGGCAGCATAATGTACGTCAAAGACAACATTATTTTCCAATCAAACGAGGAGTTGACACAAAAAATGCGTGAAGCACATTACGCTAAGGAAACACTAAAGCGACACAAATGTCCCTACTGTGAGAAATGCTTCCTGTTTCCATCAAAAGTGTCTCGTCACGTCCAAGCCGTCCACAAAGATCTGAGCGTTGTTAAGAAGACCACAAAAAAAAATCATTTATGTCCAGTTTGCGGGAAGGCTTTTGTGAGCCAATTCAAAGTTCGCCGTCACATGATCGTGCATGATACTGAACTCAAGACGGGATTGCAAAAGAATTGGTCGAGAAACTATTTCGTGTGTACGGATTGCAACCGAAAATTCCACACTGAGACAACATTCAAGCGCCATGAACTGGTTTGTGATATGCTTCAAAAATCGCTTATTCAATGGTCCGATGATCATGATTTCTTTTGCGTTATTTGTTCTCATATCTTCAAATCAAATGACGAAATGATCGAGCATATGAAGAAGCATGACTCGAACTCTGTTCATACTTGTGTCGCATGTCCTGAAGTAACACTTTCCCACACTGATATGATCAGACATGGAAAATATCACGAAGAAAATGCTATCTATCGTTGTTGTGCTTGCCAAAAGCTGTTTCCGAATGGCGAAGAAATTGTAAAACATCTGCTACGGAACCATAAAGATTACAAACCTTGGCAGTGTTTGACTTGTGAAAAGGGATTTTTCGATAAGTTTAAGTTGAAGCAACATGAGATGACTCATGATCCATCATCAGCAAAACAGTATCTATGTGAATATTGTGATCATCGACCATTTGCTCAACTTGATTATCTGAATTGTCACATTCGTCGGAAGCATTCAGGATCGAAGCCGTATTGCTGTTCCTACTGTCCAAAGCAATTTGTATTTCAACACGATCTCAAAATTCATCTAACGACTCACAATGGGGATAAAAAACACATTTGTAAAATTTGCCAGGCATCATTTACGAAAGCATGGAGTTTAAAGCAACATTTGACGCTCCACGAGACGCCAGCAAGTCCAATCAGTTGTCAAATTTGTGATTTTGTAGGAAATAGCAAACGTGAGCTTCGCTCTCACATGGACTCTCACGATAACATCAAAGATTTTAATTTGTGCTTTATTGAGAGTGGTGCCGAGGATCAAAGTGAAGTCGACACATTTGGACTTGTTGAAATTCCAGGTAGTTACTAA
Protein Sequence: MSIDPANSCRICMISDCNLTCIFEEHDGKPINEIISEISGVIIEKDDMLSQNICEECKIKTLELFAFRQLCIDSDETMRYNLLLAEQSENASEEDLSPIASKHHDTPGEEMEEFFIDDEDEPSQFSGSSEQREYDKLFMENEVEDDDSQTIQDSIEEVPEDDGKLNKKDDGTNMKESQSVTIERVGSIMYVKDNIIFQSNEELTQKMREAHYAKETLKRHKCPYCEKCFLFPSKVSRHVQAVHKDLSVVKKTTKKNHLCPVCGKAFVSQFKVRRHMIVHDTELKTGLQKNWSRNYFVCTDCNRKFHTETTFKRHELVCDMLQKSLIQWSDDHDFFCVICSHIFKSNDEMIEHMKKHDSNSVHTCVACPEVTLSHTDMIRHGKYHEENAIYRCCACQKLFPNGEEIVKHLLRNHKDYKPWQCLTCEKGFFDKFKLKQHEMTHDPSSAKQYLCEYCDHRPFAQLDYLNCHIRRKHSGSKPYCCSYCPKQFVFQHDLKIHLTTHNGDKKHICKICQASFTKAWSLKQHLTLHETPASPISCQICDFVGNSKRELRSHMDSHDNIKDFNLCFIESGAEDQSEVDTFGLVEIPGSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -