Basic Information

Insect: Propsilocerus akamusi
Gene Symbol: -
Assembly: GCA_018397935.1
Location: CM031471.1:3881334-3883943[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.079 3.9 7.9 0.2 2 23 226 248 225 248 0.94

2 12 0.42 21 5.6 7.7 3 23 290 312 289 312 0.89

3 12 2.1 1.1e+02 3.3 1.2 1 23 321 344 321 344 0.91

4 12 6.3 3.1e+02 1.9 0.0 2 23 414 436 413 436 0.93

5 12 0.52 26 5.3 0.5 1 23 444 469 444 469 0.95

6 12 4.3 2.1e+02 2.4 0.9 1 22 475 496 475 498 0.86

7 12 8.7e-06 0.00042 20.3 1.9 1 23 540 562 540 562 0.96

8 12 3.4e-05 0.0017 18.5 0.1 2 23 569 590 568 590 0.96

9 12 9.4e-05 0.0046 17.1 4.1 2 23 597 618 596 618 0.96

10 12 0.00058 0.029 14.6 0.1 3 23 626 646 624 646 0.95

11 12 0.00029 0.014 15.5 0.3 2 23 653 674 652 674 0.96

12 12 3.8e-06 0.00019 21.4 0.9 1 23 680 703 680 703 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.079	3.9	7.9	0.2	2	23	226	248	225	248	0.94
2	12	0.42	21	5.6	7.7	3	23	290	312	289	312	0.89
3	12	2.1	1.1e+02	3.3	1.2	1	23	321	344	321	344	0.91
4	12	6.3	3.1e+02	1.9	0.0	2	23	414	436	413	436	0.93
5	12	0.52	26	5.3	0.5	1	23	444	469	444	469	0.95
6	12	4.3	2.1e+02	2.4	0.9	1	22	475	496	475	498	0.86
7	12	8.7e-06	0.00042	20.3	1.9	1	23	540	562	540	562	0.96
8	12	3.4e-05	0.0017	18.5	0.1	2	23	569	590	568	590	0.96
9	12	9.4e-05	0.0046	17.1	4.1	2	23	597	618	596	618	0.96
10	12	0.00058	0.029	14.6	0.1	3	23	626	646	624	646	0.95
11	12	0.00029	0.014	15.5	0.3	2	23	653	674	652	674	0.96
12	12	3.8e-06	0.00019	21.4	0.9	1	23	680	703	680	703	0.96

Sequence Information

Coding Sequence: ATGGAACGAAACCTATGTAGATTGTGTGGAAAAGTCCGAAATGCAACGAATTTATTAGATTTGTCTGTTGAAATTGTTTTTCAAGTCTCGTATTATTGTAGAGTGGATCTTGTAGATGACAAGAATCTATCCCAAAAGATATGTTTTGACTGTAATTATGCAATTGTGAATTTTGCTAAGTTCTCAGAGAATGTAAAGGATGTACAGATCCAGTGCTTGATTGGAAATGATTTTATCAACGCTCCCGTCAAAGATGAGCAAGAGGAAATTATTGATACAGTAATTGAAATTCTACCCGAATCAGCAGATGACAAACACAAATCACGATCTTCTGAACCATTGCCAACAACAGTTTATGTTGAAGAGCAAATCATAGAACAAGATAATGAAGAGGAAGAAGATTTCGAGCAAAGCTGTAGTGACTGGGATAGATCTGCGGAGCCATCAGATAGCGAGTTTGAAGCTCCTTTAAGCAAGAGAAGGGGCACGCGTCAAACTAAAAGATCCGAAGAGAAACCAAAGAAGGAAAAAATCCAAAAGATTCATCCGAGTGAAGTGATAACAATATCTGATGAATGCATTCTGGATGTACCTGCTTCAGATAAACACGTTGATGGCTCTTTGGCAGAGACAGCCTATTCGAAATTTCCAAATCTATGGTGTAAAATTAGGCTCTCGTGTATGGAATGTGGCGAAGATACAGACGGACCTCATCTTCTGAAGAATCACTATATTCGACTTCACTCTGATCTCCAAGATGATGATGAAAAGTATCAGTGTACTGAATGCGATGGCGAAGAATCGATTGTAACTTATTTCTACGAGTACCTGAATCACGCCGTTGCTCACCAGCCGCATCTGAAATTCTGCTGCATCATCTGCTCTAAAATGTTCTGCAATACCTATGCACTGTATCATCACTACCAGAAATCCCATGAGCAATCTGAACGGATATCAATCCATTCTTGTCTTGTATGCTGCCAGTTCTTCCAGGATGTCGATAATTTGGAAGCTCATGAGCAAGAAATCCACAAAATTCAAGTCCAGCGAGAAGAAATAGAGAGTAAGACACAATGCCAATCAATTGTTGAGACGCTGTTTGCCAAAGAGTTGGCCAGTGATTTTGTGGAACATCAGAACACATTCGAAGTTTCCGAGAATGAGAAAAATATTGATGGAACTGTAACAGATAGTTGCATTCGAAAATTTGCTGGTCAGCTCTGGAGTGACATTGCTGTACCATGCGCGGAATGTGCGGAGATTTTGCCGTCACCGTTTCTTCTTTCAGAGCACTACAGTGTTAAGCATGCAGATGCAAAAACGCGCAATTATATTTGCAACAGCTGCCCAGAGATCAAGACATTTTTCAATTTTGAATCCTTTATTAATCACGTTTTTACAATTCACTATGAGCATTTACGTTACATATGTTTCGTTTGTGATTCAATGTTTTGGAATTATAAGTCACTTTACAATCACTTCGGAATATTCCACTATGAGGTTCGCGTTCTGATGTGCATACACTGCGGCAAATACCATAAATCGGGCTACGATCTAAAGTGCCATAAAGAAATTCATGGTCCAAAACGTGAAACTATAGAAATTAACTCTGGGCCATTCGAATGTAGTCAGTGTCAAAAGGCATTTAGCAAGGCACACCAGCTCAGAAGACACTTGGAAGCGCATAAGAATGTAAAGACTTGGATTTGCGAAACATGTGGAAAATCGTTCTCCGCCAAAGCCACTTTAATTAATCATCGCTTAGTCCACACAAATGACCGACCTTGGGAGTGTGGAGTTTGTCACGAAAAATTCAAGTCGAAATATAAGCTTAAACACCATCAAATGATTCATACAGGTGAAAAACCATGGGCATGTGAAACTTGTGGCCAGAGGTTCCGTGCAAAAGGAACTTTAAAAGCTCATGCCTTGATACACACTGGCGAACGTCCATGGTCATGCGAGTATTGTGAAAAAAGATTTGGCGCTAAGTATGATCTCATGGTGCACACGCGATTACATACTGGCGAGTACACTCACGAATGCTCGGTTTGCGGTGAGAGATATCCCAGTTGGTCTAATTATAGCAAACATATGCGTGGTCGTCATCAAATCGATCCGCGATCAGAGAAAAAGAAAAAATATGATGCGCTACATAAAAGTGAAGGAAAAGATCAATCAAATTCGATGGATTCAACAACAGAAGAACAAACATTTTACATCACAAAGTAG
Protein Sequence: MERNLCRLCGKVRNATNLLDLSVEIVFQVSYYCRVDLVDDKNLSQKICFDCNYAIVNFAKFSENVKDVQIQCLIGNDFINAPVKDEQEEIIDTVIEILPESADDKHKSRSSEPLPTTVYVEEQIIEQDNEEEEDFEQSCSDWDRSAEPSDSEFEAPLSKRRGTRQTKRSEEKPKKEKIQKIHPSEVITISDECILDVPASDKHVDGSLAETAYSKFPNLWCKIRLSCMECGEDTDGPHLLKNHYIRLHSDLQDDDEKYQCTECDGEESIVTYFYEYLNHAVAHQPHLKFCCIICSKMFCNTYALYHHYQKSHEQSERISIHSCLVCCQFFQDVDNLEAHEQEIHKIQVQREEIESKTQCQSIVETLFAKELASDFVEHQNTFEVSENEKNIDGTVTDSCIRKFAGQLWSDIAVPCAECAEILPSPFLLSEHYSVKHADAKTRNYICNSCPEIKTFFNFESFINHVFTIHYEHLRYICFVCDSMFWNYKSLYNHFGIFHYEVRVLMCIHCGKYHKSGYDLKCHKEIHGPKRETIEINSGPFECSQCQKAFSKAHQLRRHLEAHKNVKTWICETCGKSFSAKATLINHRLVHTNDRPWECGVCHEKFKSKYKLKHHQMIHTGEKPWACETCGQRFRAKGTLKAHALIHTGERPWSCEYCEKRFGAKYDLMVHTRLHTGEYTHECSVCGERYPSWSNYSKHMRGRHQIDPRSEKKKKYDALHKSEGKDQSNSMDSTTEEQTFYITK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -