Basic Information

Insect: Propsilocerus akamusi
Gene Symbol: L
Assembly: GCA_018397935.1
Location: CM031469.1:9379031-9390137[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 3.9e-05 0.0019 18.3 1.4 1 23 125 147 125 147 0.97

2 16 0.83 40 4.6 5.4 1 23 153 175 153 175 0.98

3 16 4.2e-06 0.00021 21.3 3.1 1 23 181 203 181 203 0.99

4 16 5.1e-05 0.0025 17.9 0.5 1 23 209 231 209 231 0.98

5 16 0.28 14 6.1 0.2 2 23 288 311 287 311 0.89

6 16 0.01 0.49 10.7 1.4 2 23 337 359 336 359 0.95

7 16 0.076 3.7 7.9 0.7 1 23 432 454 432 454 0.95

8 16 0.00079 0.039 14.1 0.8 1 23 507 530 507 530 0.89

9 16 0.18 8.6 6.8 0.2 1 21 533 553 533 556 0.89

10 16 0.03 1.5 9.2 0.7 2 23 560 582 560 582 0.95

11 16 0.037 1.8 8.9 2.3 1 23 615 637 615 638 0.96

12 16 0.021 1 9.6 0.4 2 23 813 837 812 837 0.93

13 16 0.13 6.5 7.2 0.0 1 23 843 865 843 865 0.95

14 16 0.11 5.6 7.4 2.6 2 23 872 893 871 893 0.98

15 16 1.8 87 3.6 0.0 2 23 1007 1028 1006 1028 0.94

16 16 1.2 60 4.1 3.6 2 23 1038 1059 1038 1059 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	3.9e-05	0.0019	18.3	1.4	1	23	125	147	125	147	0.97
2	16	0.83	40	4.6	5.4	1	23	153	175	153	175	0.98
3	16	4.2e-06	0.00021	21.3	3.1	1	23	181	203	181	203	0.99
4	16	5.1e-05	0.0025	17.9	0.5	1	23	209	231	209	231	0.98
5	16	0.28	14	6.1	0.2	2	23	288	311	287	311	0.89
6	16	0.01	0.49	10.7	1.4	2	23	337	359	336	359	0.95
7	16	0.076	3.7	7.9	0.7	1	23	432	454	432	454	0.95
8	16	0.00079	0.039	14.1	0.8	1	23	507	530	507	530	0.89
9	16	0.18	8.6	6.8	0.2	1	21	533	553	533	556	0.89
10	16	0.03	1.5	9.2	0.7	2	23	560	582	560	582	0.95
11	16	0.037	1.8	8.9	2.3	1	23	615	637	615	638	0.96
12	16	0.021	1	9.6	0.4	2	23	813	837	812	837	0.93
13	16	0.13	6.5	7.2	0.0	1	23	843	865	843	865	0.95
14	16	0.11	5.6	7.4	2.6	2	23	872	893	871	893	0.98
15	16	1.8	87	3.6	0.0	2	23	1007	1028	1006	1028	0.94
16	16	1.2	60	4.1	3.6	2	23	1038	1059	1038	1059	0.94

Sequence Information

Coding Sequence: ATGACCAGACGGAAGCAATTAAAGCCTAGAGCTTTAGCAAAACATTCAGATAATGGCGATGCAGCAAATGAGACTCTTCTATCGAGTCTCCTGCTCAACGTTGAGGATGATCTTCAAAAGCCCAACATGGTCACTGACAAAAATGAAGGAACTACTACTTTTGCAACTGGTGAACAAGGCGAAAATTATGAGTCTGATAATTCGGACTGTGACAGCGTTGGGACATATTCATCGGAACTCTATTCATCACACACATCCATTAGCTTTCCATCATCTAATAACAGCACATCCGAAATGGAGAATAATGATATTGAAGCTGATGACGATGTCAAAAAGGAGAAGAAGGATAAAAGCAAATTCAAGAGTAACTCGTACAAGTGTCAGTTTTGTGAAAAATCATTTCCGCGCCTTGGATATTTGAAGAAGCACGAACAGGGTCATGAAGACTACATGCCATTCAAATGTGAATTTTGTGCACGTCTTTTTAAGCATAAAAGATCACGAGACCGTCATTTGAAGTTGCACACGGGTGATCGGAGATATAAATGCCTTTATTGTGAATCGGCATTTTCTAGGAGCGATCATTTAAAAATTCACATGAAAACTCATGACAGCAAGAAAGCTTTCCAATGTAGCTTTTGTAATCGAGGCTATAATACGGCTGCAGCACTCACAAGTCATATGCAAAATCATAAGAAACAAAATGAATTGCGCGAGAAAAATAGTTCTCCTTATAACTTTAGTTTGAAATCTTCTGAATCGTCATCGACTTCAGTGATTGATAAGCGACACACGACAATTGATGCTCTATCACCGCGTTCTTTAAAATCCGAAGATTTGACAGAAACGAAAAATTCTATTAAATGTTTCTATTGCACAAAGGCAAATTTCGCAACATTGGAACAGTTGAATGTTCACATTAGCATAATGCACAATCATAGATTTCCCAAAGAAAAGAAAAATGTTCAACGATCACAGCAAGAACATTTTACACAATCATTTTATAAATCTTGCGAATATTGTTTAATGAAATTTAATTCAACAGAGAAATTATTCAAACACATAAAATTGATTCATGACACGAAAATTCAAGAGATAAACCAAACTTCTCCATTGAAGGATTCACCTAATGGCGAAGCCATTAAAAGAAAGCCAATAACGTTCGAACGCGAAGTGCAAGAAGATCAACCGACAGACTTAAGTCAATCGAACTCAAAGCGACTAAAAATAGAAGTCGCACCAACTGAGAAATGTCCAACTGCTGCAGTTAAGCCTTTGGTGACTCCTGATGTTTTCCTATGCAATCAATGTAATGCTTCATTACCAAGCTTTGAATCATTCCGACTGCATCTTAAGAGTCATCTCGAGGAGAATTATAGCAATCGCCGTAATGAGCAAATCGAAATGAATCATCTTTTCTACAACACCCAAAAGCGTTTTGTGTGTCAACAGTGTCGCGATGTTGTATTTGATAATCGTTTAGAATATGATCAGCATGTTGAACAGCATTTTACCGAGTTTCTGTGTCAAGAATGTGACAGTTCCTTTACGAAAAATGACGATCTGCAGAATCATTTGTTTGAGAATCACGTCCGCTTCAAGTGCACCGTCTGCAATGAGACCCTCGACTCAATAATGTCATTAAAATTACACTTTGCCGCTCAACATAACATACGTCGCTGTTCGGCATGCTATGAAGTCTTCCGATCGGAGCGCGATTTTAAGAATCATGTGCAGATCAAGCATGCAACAACAGACACTATTCGATGCATTTTCTGTCGCGTCACATGCTCATCGGAGTTGGAAATGCATTTTCATTTTCTGTCGACACATGTAAAGCAGTTTAGATGTCCTGCATGTTCTGAGTCATTTCATGTTGAATTTCTCCTTGATCGTCATCTACAGATGCATCACGCTGCTAATGAAGTTCAAACGAGTGCAAAATTTTCTAGCAACGACCATGAACAGCAACAGTTTACATCAACTAATATGCCCCATCAACCCAACATGATTGCGGCACAATTCAAAGAAAAGATGTTAACGAATGACGATCAAAAGATTACCGAAGCAAATCTGCTGAGTCGCTTGAATCCAACAATGTTTAATTTAAATCAATTCCATAATCAGTATGGCAAGAACTTTAATTTGAGCACTTTTAATGAAGCTTTGTCGATTGCACATCGTGAAAATGAAGAGCGACAAAGGATTAAGGATATTTTTTGTTCATCGAATATGATTGAAAATCATGCTAAAAATATTACAGAAACTAGAATCTCGCCCAAAACTTCTTTCATGTCGAAGCCGCTTTTGAGTGATAAAAATAACAACAAAAATAAAGAAAAGAATGAAACGAGCGCAATTTTTAAGGACTATGAATCGTCAGCAGAAAAATCTAATCAAATCATTCACATCAATTCAAAATCGGGCGTGAGCTTGAAATGTGCGTATTGTGAGTTGCGTGAAGATTTTAAATCAAGAACGGAATTAGAAAATCACATGAAAATTCAGCACAATATAGCGGCAAAACATAAATGCTCAATATGCGATGAAATTCTTCCTTCGCCCGCAGTTTTGGCCGAACATAAATTGCAGCATTGCAAAGTGATTACAGGAAAATGTTTTCATTGTTCGGAAACAATTAAAAGCGTAAATGAGTTTAAGAGCCACCTACAAACTCACAATAAAGTTTCACCGCCGGATCTTCCCATTCATTGTATTTGTTGCCGTCAAATTTTGAGTTCCGATTTTGAAATAACTTTACATGCCAAGTTCCACACAAATTCATGTAGCACATCAACAGCTGACGATGATCGCACCTGTGCATTATGTCTCAATATTATGGAGCATGCTAATGTTAAGAAGATTTGTAATTCATGCATGGCGAAGCATAATTTCTCATCAAATATTACGGTTAAAATTCCAACGAGTCCCAAGTTGTGCAATTTATGTAAAAATAGTGTTGATTCTGAAAAGTTTCAGGATCATTTATTTGAACATTCAATGGAGAATGGAACAATTTCTTGTGCCATTTGCAATTCAATTTTTACCGCAATTCAAGGACTCAAAGAACATTTAATTGAACACTCAATTCAAAGTTCTGATTTAAAGGAAAAATGCACAAAATGTAATGCACGCTTTTTATATCATTCCGAATTGGCGCATCATTTATATGATCATGATCAATGCGATGCAAAATCTGATGATCCAGCATCGACAACAATCAAACAAGAAAAATTTGACGATTCAAATGATGTCGGCAGAAAGATAAAGGAAGAAGAAGACGATGACTATATTGAAATTGAAAAAGTTACTACGGTTTAA
Protein Sequence: MTRRKQLKPRALAKHSDNGDAANETLLSSLLLNVEDDLQKPNMVTDKNEGTTTFATGEQGENYESDNSDCDSVGTYSSELYSSHTSISFPSSNNSTSEMENNDIEADDDVKKEKKDKSKFKSNSYKCQFCEKSFPRLGYLKKHEQGHEDYMPFKCEFCARLFKHKRSRDRHLKLHTGDRRYKCLYCESAFSRSDHLKIHMKTHDSKKAFQCSFCNRGYNTAAALTSHMQNHKKQNELREKNSSPYNFSLKSSESSSTSVIDKRHTTIDALSPRSLKSEDLTETKNSIKCFYCTKANFATLEQLNVHISIMHNHRFPKEKKNVQRSQQEHFTQSFYKSCEYCLMKFNSTEKLFKHIKLIHDTKIQEINQTSPLKDSPNGEAIKRKPITFEREVQEDQPTDLSQSNSKRLKIEVAPTEKCPTAAVKPLVTPDVFLCNQCNASLPSFESFRLHLKSHLEENYSNRRNEQIEMNHLFYNTQKRFVCQQCRDVVFDNRLEYDQHVEQHFTEFLCQECDSSFTKNDDLQNHLFENHVRFKCTVCNETLDSIMSLKLHFAAQHNIRRCSACYEVFRSERDFKNHVQIKHATTDTIRCIFCRVTCSSELEMHFHFLSTHVKQFRCPACSESFHVEFLLDRHLQMHHAANEVQTSAKFSSNDHEQQQFTSTNMPHQPNMIAAQFKEKMLTNDDQKITEANLLSRLNPTMFNLNQFHNQYGKNFNLSTFNEALSIAHRENEERQRIKDIFCSSNMIENHAKNITETRISPKTSFMSKPLLSDKNNNKNKEKNETSAIFKDYESSAEKSNQIIHINSKSGVSLKCAYCELREDFKSRTELENHMKIQHNIAAKHKCSICDEILPSPAVLAEHKLQHCKVITGKCFHCSETIKSVNEFKSHLQTHNKVSPPDLPIHCICCRQILSSDFEITLHAKFHTNSCSTSTADDDRTCALCLNIMEHANVKKICNSCMAKHNFSSNITVKIPTSPKLCNLCKNSVDSEKFQDHLFEHSMENGTISCAICNSIFTAIQGLKEHLIEHSIQSSDLKEKCTKCNARFLYHSELAHHLYDHDQCDAKSDDPASTTIKQEKFDDSNDVGRKIKEEEDDDYIEIEKVTTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -