Basic Information

Insect: Propsilocerus akamusi
Gene Symbol: -
Assembly: GCA_018397935.1
Location: CM031470.1:8756773-8758423[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.11 5.5 7.4 0.2 2 23 184 206 184 206 0.96

2 11 0.2 9.7 6.6 1.9 2 23 213 235 212 235 0.95

3 11 0.00014 0.007 16.5 3.1 3 23 248 269 247 269 0.97

4 11 0.051 2.5 8.5 3.6 1 23 275 297 275 297 0.98

5 11 0.04 2 8.8 1.4 1 23 306 329 306 329 0.94

6 11 9.8e-06 0.00048 20.2 0.7 5 23 338 357 336 357 0.95

7 11 0.001 0.051 13.8 0.4 1 23 363 386 363 386 0.93

8 11 0.00025 0.012 15.7 0.1 1 23 395 417 395 417 0.98

9 11 0.0058 0.29 11.4 8.4 1 23 422 444 422 444 0.98

10 11 2.1e-06 0.0001 22.3 2.4 1 23 449 472 449 472 0.97

11 11 0.00087 0.042 14.0 2.1 1 23 479 502 479 502 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.11	5.5	7.4	0.2	2	23	184	206	184	206	0.96
2	11	0.2	9.7	6.6	1.9	2	23	213	235	212	235	0.95
3	11	0.00014	0.007	16.5	3.1	3	23	248	269	247	269	0.97
4	11	0.051	2.5	8.5	3.6	1	23	275	297	275	297	0.98
5	11	0.04	2	8.8	1.4	1	23	306	329	306	329	0.94
6	11	9.8e-06	0.00048	20.2	0.7	5	23	338	357	336	357	0.95
7	11	0.001	0.051	13.8	0.4	1	23	363	386	363	386	0.93
8	11	0.00025	0.012	15.7	0.1	1	23	395	417	395	417	0.98
9	11	0.0058	0.29	11.4	8.4	1	23	422	444	422	444	0.98
10	11	2.1e-06	0.0001	22.3	2.4	1	23	449	472	449	472	0.97
11	11	0.00087	0.042	14.0	2.1	1	23	479	502	479	502	0.96

Sequence Information

Coding Sequence: ATGGAAGCACTGGAGGAATTATTTGATAAATGCCGTTTCTGCTTCAAGCCGATGAAATCAAATACTCAGGGATTGGAAATCGATGAGAATCTTGTGCATTTCTTTGAAGTTTTGACAAAATTAAAATTCCAGTCATCTGAACTCTTGTCAAACAAAGCATGCGCAAGTTGCCAACATCGATTGGAAGATTATTACAACTACAATATTATGATAACCGAAAATCAGCAAAGACTTCAGCAATTACTGCAGGACGACATTCACGCTACTGATTCGGATAGGAAGCATACCGAGTTGAAGATGGAAACTGCTAGGACTAAACCAGTGACAAACGATGAAATAACCGAAATTTACATTGAAGACGACAGAGAGTACATTAAAGAAGAAAATAAGGATCCATCCTCATCGGAAAACGAATGGTTGGAGAGGATAACACCAAAAAAGAAACCACAGTCAAAAGAAAAACGTGATAAATTGAGACACATTGCAAAAACGATATACTCAAAGCTAACACCACCAAAGGTGCAACAATCGCAAAAGTTTCCTGATAACCGATGCCCGACATGCCTGAAGCGCCTCAGAAATGGTGTGGAAGTTCAAAAACACATAGAACGAATTCATTTACGCATCAAAAATATGCAATGTGATGCTTGTCCATTTCGATGTTATAAGAAGTATGATTTGCTTCTCCATTGGCGGAACCGACACATGGAAAAACAACATTTAGTTGACACACTGGTTCTATGTCCAATTTGTGGCTGCAAATTGAAAAATTCTTCGGACCTGCGGCGTCACACAAATAAAAAACATCTAAAAATGAAGCGCTTCCGTTGCTCAAAATGCAATTATACTAGCTATGAACGAAAATCAATGCAAATGCACGAGAAAACTCATCTGCCATCGCAGTTGAGAGATCGATTCCCTTGCGATCAGTGCAATGCCTTGTTGTCTACGAAGCACACACTGAAAACTCACAAAGATTCTGTTCATATTGGCATAAAGCCTTGGAGTTGTCAATGTGGAAAATCTTTTGCACAAAAGAGCACACTCGAAAAGCACATAAAGTCTGTTCATGAAAACATTCGAGAGTTTGAATGTTCAGTTTGTCTAAAGAAATTTTCCTCAGCTCCGTATTTAACTATGCATAAGGAATTGATGCATTCAGCCGAAGGCGAAAAGCCGAAGTATCCTTGCGATATATGCGGTAATGTGTTCTCGACGCTGCTGGCTATGAAGAGCCATACAAAAATTCACAGTGATCCACAGTTCGAGTGTCACTGGTGTCAGCGCAAATTTCATCACAAAACAAAATTACTCGATCACATGGAAAAACATGAAACGCTTCCTTACAGTTGTCCACATTGCCCACGTTCATTTAGGAGAGAATCAAAGCTTAATAGTCATTTTAAAGTCGTTCATTTCAAAGAGAAAACAACATACCGTTGTGAATTGTGCAATTCAACTTTCACAAGAAGAACAACATACCGCGATCATGTCATTAGACAACACCGCAAAGATATCGATCCGGCATTTGAACGCGAACTCATCGAGCGTATCATGACTATGAAAGCCGAAGAACAACAATAA
Protein Sequence: MEALEELFDKCRFCFKPMKSNTQGLEIDENLVHFFEVLTKLKFQSSELLSNKACASCQHRLEDYYNYNIMITENQQRLQQLLQDDIHATDSDRKHTELKMETARTKPVTNDEITEIYIEDDREYIKEENKDPSSSENEWLERITPKKKPQSKEKRDKLRHIAKTIYSKLTPPKVQQSQKFPDNRCPTCLKRLRNGVEVQKHIERIHLRIKNMQCDACPFRCYKKYDLLLHWRNRHMEKQHLVDTLVLCPICGCKLKNSSDLRRHTNKKHLKMKRFRCSKCNYTSYERKSMQMHEKTHLPSQLRDRFPCDQCNALLSTKHTLKTHKDSVHIGIKPWSCQCGKSFAQKSTLEKHIKSVHENIREFECSVCLKKFSSAPYLTMHKELMHSAEGEKPKYPCDICGNVFSTLLAMKSHTKIHSDPQFECHWCQRKFHHKTKLLDHMEKHETLPYSCPHCPRSFRRESKLNSHFKVVHFKEKTTYRCELCNSTFTRRTTYRDHVIRQHRKDIDPAFERELIERIMTMKAEEQQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -