Paka009378.1
Basic Information
- Insect
- Propsilocerus akamusi
- Gene Symbol
- Zfy2
- Assembly
- GCA_018397935.1
- Location
- CM031469.1:11176293-11178636[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.047 2.3 8.6 0.2 1 23 30 53 30 53 0.96 2 17 0.071 3.5 8.0 0.6 7 23 64 80 58 80 0.91 3 17 0.00014 0.0066 16.6 1.2 2 23 87 108 86 108 0.97 4 17 0.0033 0.16 12.2 2.0 1 23 112 135 112 135 0.94 5 17 2 97 3.4 0.3 2 23 142 164 141 164 0.91 6 17 0.0011 0.053 13.7 0.1 1 23 174 196 174 196 0.95 7 17 9.5e-06 0.00046 20.2 1.9 1 23 202 224 202 224 0.98 8 17 0.038 1.8 8.9 0.3 1 21 229 249 229 250 0.96 9 17 0.36 17 5.8 3.0 1 23 393 415 393 415 0.97 10 17 0.0051 0.25 11.6 7.2 1 23 421 444 421 444 0.95 11 17 0.12 5.8 7.3 0.4 2 12 460 470 459 480 0.83 12 17 3.4e-05 0.0017 18.4 0.6 2 23 486 508 485 508 0.90 13 17 0.00053 0.026 14.7 2.6 1 23 514 536 514 536 0.98 14 17 0.0031 0.15 12.3 0.3 5 23 577 596 576 596 0.90 15 17 0.0015 0.072 13.3 0.4 1 23 605 629 605 629 0.91 16 17 0.14 6.8 7.1 2.4 5 23 638 656 636 656 0.96 17 17 0.084 4.1 7.8 1.5 1 23 662 685 662 685 0.95
Sequence Information
- Coding Sequence
- ATGGAGATAGTTCAAGTTGTATCTGTTCCGGAAGCCATCAAAAATCTTAGAAAGAAGAATAACAAGAAAATGAATGCGAAACCTATATTTCAATGTGATTTTTGCGAAAAATGGCTAAGCTCTGAACTAAATCTGATCAGACATCAAGGGACTGTGCATGTCGCAAAGGATTTCATCTGTGATTTTGAAGGAAAGCACTTCAATACTAAAGACAAGCTAAGATTACACATCCTCCAGCATAGAAAATATTTTCGAGTTAGCTGTTTAGTTTGCAATCGAGAATACAGCACAAATCAAAGCATGAGAAAACATCTCAGGACTCACTTCGAAACTCATCAGTGCTATATTTGCGGTGCAACATTTAAGCATAAGAGGATTTTGTTAAATCATATGTCAGCAATTCATACAGATAAACCTACAATTCCGTGTAATTTTTGCACTAGACTGTTTCCAAATACAACAACCCGTGATGCTCATCAGAAAGCCATTCATCCGGATCAAGAATTCAATACGACCGCTTTTAAGTGTTCTGAGTGCGGGGCTGGTTTCGAAATGAAGGAAGAGCTTAGAATTCATAGCTTCATTCACTATGAAGGAGAGATTTTTTCATGTCCGGAATGTGATCAAATCTTTAAGAAGAAAAAATTGCTGTTGACACACCAGAAGAAACATGGAATTGCTCAATATCAGTGCGGTGTCTGCCTGCAATGGTTTAAATACCGATCAAATCTCGGAAAACATCAGAAGGGTGGCAGATGCAAAGGTCCTCAAGATTGTTCAAAAATTGCTGGACCTTCTTCAGCTGAAATCGCTGATATTGCAAAACAGCAACTACTTGATATGACTGTTAACTATAGTCGAATGATTGCTGCCAGTCAAGATGATTATATCTTGCCAGAACCTAAGGAAACAGATCCTGAACAAGGTAAAGTAGATAATGAACCTGAAAAATACTATGTTGTAAACTACATTAAAGATGAACAAGAAGAAGAACCGGAACGATCCGTTATTGAAGAATGTTTTGAGGAACATTCTGATCATTGTGAGCAGCATAGTGATGATGACCCACTAGTTCGTTTTGATAAGAGCAAATCCAAACATTTAGATCCAGATTACAAAAGACCCTACGTGAAGCGAAAGCCAACAAGGATCATTAAGACTTTTCCTTCGATGGAATATGATTGCGATTTGTGTGGTTTTCATATTGAGAAGAAATGCAACATGCTTTCTCATATTCGAGATCACGCTGCTAAGAATAGACACAAATGTAAAAAATGTTCTGAATCATTTAGAACGCGCATTCAATTGCACAAGCATTCACTTAAGCAACATGGAAGGGGAGTTATTGGATCAGCTGAGTACAGCCAAGCGACATCAGAATGTTCCATTTGCCAAAAAGTATTTAGCAATGAACGAATTAAATTTCATATGAAACTTCATGAGATGCCGTCAATGATGTGCGATCAATGTGGGAGGGTTTTCCGACATAGAACTGCCCTTGAAAAACATATTGTTGGTCGCCACATTGATGAGCGGAATTTCACTTGCTCTAAATGCGCTAAACGTTTCAAGAAGCTTTCTGTTTTAAGACAGCACGAACAGACTCACGACGAAATTAGAGTTTATGTTCAATGTCATGTATGTCATATGATGATGCTGGTGAAAAGCTTAAAGCTACATATGGAGATTCGACATGGTGACAAGTACAAAGAAAAGCCAGCGATTTGTCAATGTGGCAAAGCATTTCGGTATCAGAAACAACTTGATAAGCACATTGCTGATGTCCATGATGTTGTAAATAAAGGTGCTATTTATCCATGTCCGGAATCGAGTTGCGGCATGACTTTCAATCGTCGTCAGGAGCTGAGAAATCACTCGTTTGAACACTACGATGGAAAAATCTTTGAATGCCATTGTGGTCTCAAATTCAAGAAGAAGAAACTTATGTCCATTCATCTAGCGACACATGATCGGAAAATACAATATCCTTGCGACATGTGTAACGCAGTTTTTCAGACTTGCGGTGGGAGGCGAAAGCATAAATCGAAAGTTCATGAACAAATTTTTGTTCAAAATGAACTTTTTGAAGTTAATTATAATCAGTCGATTCCCGCAAGTCAAGATAATTGTATCATGCCAAAACCTAGGGAAATAGTTCTTGAACCAGCTAAAGTAGAAAATGAACCTGAAAAATATTATGTTATAAAATACACTAAAGACGAAAAAGGGGAAGAAACGGACGATAAAACTATTTATGAAGTTGTTGCTGAGTAA
- Protein Sequence
- MEIVQVVSVPEAIKNLRKKNNKKMNAKPIFQCDFCEKWLSSELNLIRHQGTVHVAKDFICDFEGKHFNTKDKLRLHILQHRKYFRVSCLVCNREYSTNQSMRKHLRTHFETHQCYICGATFKHKRILLNHMSAIHTDKPTIPCNFCTRLFPNTTTRDAHQKAIHPDQEFNTTAFKCSECGAGFEMKEELRIHSFIHYEGEIFSCPECDQIFKKKKLLLTHQKKHGIAQYQCGVCLQWFKYRSNLGKHQKGGRCKGPQDCSKIAGPSSAEIADIAKQQLLDMTVNYSRMIAASQDDYILPEPKETDPEQGKVDNEPEKYYVVNYIKDEQEEEPERSVIEECFEEHSDHCEQHSDDDPLVRFDKSKSKHLDPDYKRPYVKRKPTRIIKTFPSMEYDCDLCGFHIEKKCNMLSHIRDHAAKNRHKCKKCSESFRTRIQLHKHSLKQHGRGVIGSAEYSQATSECSICQKVFSNERIKFHMKLHEMPSMMCDQCGRVFRHRTALEKHIVGRHIDERNFTCSKCAKRFKKLSVLRQHEQTHDEIRVYVQCHVCHMMMLVKSLKLHMEIRHGDKYKEKPAICQCGKAFRYQKQLDKHIADVHDVVNKGAIYPCPESSCGMTFNRRQELRNHSFEHYDGKIFECHCGLKFKKKKLMSIHLATHDRKIQYPCDMCNAVFQTCGGRRKHKSKVHEQIFVQNELFEVNYNQSIPASQDNCIMPKPREIVLEPAKVENEPEKYYVIKYTKDEKGEETDDKTIYEVVAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -