Basic Information

Insect: Propsilocerus akamusi
Gene Symbol: RREB1
Assembly: GCA_018397935.1
Location: CM031470.1:12691229-12696250[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00014 0.0069 16.5 0.9 1 23 146 168 146 168 0.99

2 15 0.00032 0.015 15.4 0.2 1 23 181 203 181 203 0.98

3 15 4.8e-06 0.00024 21.1 5.2 1 23 209 231 209 231 0.98

4 15 1.8 87 3.6 0.7 1 23 304 328 304 328 0.85

5 15 0.22 11 6.5 7.7 2 23 334 355 334 355 0.96

6 15 0.11 5.3 7.4 0.1 1 21 400 420 400 421 0.95

7 15 0.015 0.74 10.1 0.2 1 23 559 581 559 581 0.97

8 15 1.3e-05 0.00061 19.8 0.8 1 23 590 612 590 612 0.99

9 15 0.0015 0.076 13.2 2.3 1 23 618 641 618 641 0.97

10 15 0.0027 0.13 12.5 1.4 1 23 973 996 973 996 0.95

11 15 8.7e-05 0.0043 17.2 0.4 2 23 1261 1282 1260 1282 0.97

12 15 0.097 4.7 7.6 4.2 1 23 1288 1311 1288 1311 0.96

13 15 0.25 12 6.3 3.2 1 23 1395 1418 1395 1418 0.94

14 15 0.008 0.39 11.0 0.5 3 23 1463 1483 1461 1483 0.96

15 15 0.048 2.4 8.5 6.2 1 23 1489 1511 1489 1511 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00014	0.0069	16.5	0.9	1	23	146	168	146	168	0.99
2	15	0.00032	0.015	15.4	0.2	1	23	181	203	181	203	0.98
3	15	4.8e-06	0.00024	21.1	5.2	1	23	209	231	209	231	0.98
4	15	1.8	87	3.6	0.7	1	23	304	328	304	328	0.85
5	15	0.22	11	6.5	7.7	2	23	334	355	334	355	0.96
6	15	0.11	5.3	7.4	0.1	1	21	400	420	400	421	0.95
7	15	0.015	0.74	10.1	0.2	1	23	559	581	559	581	0.97
8	15	1.3e-05	0.00061	19.8	0.8	1	23	590	612	590	612	0.99
9	15	0.0015	0.076	13.2	2.3	1	23	618	641	618	641	0.97
10	15	0.0027	0.13	12.5	1.4	1	23	973	996	973	996	0.95
11	15	8.7e-05	0.0043	17.2	0.4	2	23	1261	1282	1260	1282	0.97
12	15	0.097	4.7	7.6	4.2	1	23	1288	1311	1288	1311	0.96
13	15	0.25	12	6.3	3.2	1	23	1395	1418	1395	1418	0.94
14	15	0.008	0.39	11.0	0.5	3	23	1463	1483	1461	1483	0.96
15	15	0.048	2.4	8.5	6.2	1	23	1489	1511	1489	1511	0.98

Sequence Information

Coding Sequence: ATGGAACGACGTGCATCGACAAATTCTGAATCATCAGTTGAACCTGCTGAAGTAAGCTCATCGAATAAGACACTCAGCTCCGATGCCAATTCATCGTTAGCATTGAAAACCAGCCAGGACAGTGACAATATCGAATCGGATGAAAACGATGACTATTTGAATAACAACAATACGAGTAAAATGAATAAAAATGATGACAACGAAACAAGCAACGGGCCATTAATTGAGACTAAAAATAGTAGTAGCTATAGCAATTCCACAGATAATAAAGACACAATCGTGCGACGCGATAACTTGCGACAGTTGATGGATAAAATGTTGCAAAAGAAAATTTTAAATGCATCGCGCAATAACAATAACAGCTCTGAGGAAAATTTGAATGCCAATATGGACACGTCGGAAAATTTTGAGCGCAAGTCATCGGATGACGCCAAATATGTCTGTCCGATTTGTGAGACAATTTCAAACACACAACACGAATTCACGAATCACATTCGCAGTCACAATAATATCAGAGATGCATCTGATGACGCGACAACTTTCACATGTCGCATTTGCTCAAAAGTTTTATCATCTGCATCGTCACTGGATCGCCATGTTCTCGTGCATACTGGTGAGCGTCCATTTAATTGCAAATATTGCAACTTGACATTCACAACAAATGGAAATATGCATCGCCACATGCGAACACACAAACAACATCCCTCAAATGATCGCGAGAGCTACGAAAGTGATGGATCTACTGATTCTAGCGGAAGTAGCCATGGTGGTATTCGAAAGCTTTTCAAAGCCAACACAACATTTCCACATAAGCGAAAAAGCACTGATGACGATGTTAATAATAGACGAAAAATTAGAGCTGTCAATCATAATAATAATAACATTATGTCACCAAATAGTCAGCAAAAGTTCTGTTGTCCTGTTTGTGTTCGTAACGATTTCTCAAGTATGATAAATCTAGAAAATCACATGGACAAAGAACATCCAACGATTCCCGCCAAGTGTCGTCATTGTGAAATGGTCTTCAAGAGCCATAAAGCACTGAATTCACATCGCTGTGGTCATAATAAATCACAAAACATCCAACAGGGCTTCAAGGATCTTAGTGCTTATGTTGATTTTTCATGCGAAAAATTCCCAATGATTGCCAAAAGCATGTGCGAACAAAGCATCAGAACGCCCATAACAAATCAAAAGTACGAATGTCCAATGTGCTATCGAGCTTTTCCATGTGCAAGCTCAGTTGAAATTCACATGAAAGAATGCAAGAACGAAAATCATTTAGCTCAAGATTTCTCCGGCAAGCGTCAAAGAACCGAAAGTGAATCATCCGAGGAAGATATCAAGCGTGAAGACTTTTTCGCCAATCTTGCACTTCAAAATCGCTCAATTCCAACTTCAGCACCATCGACACCATCATCAAATGCTGACAAATCATTCACGTCGCCATCTACAATGATGATTAAACAAGAATTGAGAGCAACGCCACCATTTTATCAGTACTTCAGTGAGGGCCGTGACTTTGCTGATGTTGAATCAATGATTCGAGCAACTTCATCTGGTGGCTTGGATAAGCCAATCAATGAGAACGATCAGCATCTGTATAATCGTGAGGAAGATGAAGTTCAAGACGAATTTACTCACGAATTTCGAAAAATGAAGTTGCGCGGCGAATTTCCATGTCGACTCTGTACAATGGTTTTCCCAAATCTTCGCGCTTTGAAAGGCCACAATCGCATTCACTTAAGTGCTTCTGGACCCGGTCCATACCGTTGCAATATGTGCCCTCATTCCATCAACGATAAAGCGGCACTCATTCGTCACATGAGAACACACAATGGCGATCGCCCATATGAATGTGCATTGTGCAATTATGCTTTCACAACGAAAGCTAATTGCGAGCGTCATTTGAGAAATCGTCATGGAAAATCAACTCGCGATGAGGTGAAGCGTTCCATCATCTATCATCCATCGGAAGATTCTACTGTTGAAGATCCAAGCAAAAAGATTGCAATGTATCAAACAAACCGCATGCGCAAGCAAGATGAACACTCAAATGATCGCACAACGCCAGTTTCACATTTGAAGGATATTCTTCAACCGCAAGATGACTCGCCAAGTCGCATTCAGGTTAAAAGTTTAGATAAATTAAAATCTCAACAGAATTTTGAGAATGACATTGAAGAGGAACTGAGCGAGTCTCATCGACCAATGGATTTGTCGATGGACGCATTGGATTTGAGCAAGAAAACCGATTCTTTTGCCAACAATGGCGAAGATGCTTCCGATGAGGATGATGAAGATGATTTGGAAAATAATGATGAAATGGATCAACCGGAAATACCTAAATTTGATTTAACTATGTTCGAAAAGAATCCACATTTCCTGTTCATGCAGCAACAACTGCTCAATGATGCTCTGCCAAAATTAGATCCTGCTCAAATGTTCAACTTGGCTCAAATCTATCGAACTTTTGGCTTCCCCACACCTGGATTCCCAATACATCCATTATTATTGCAAAATCCATTGCTGCTTAATGACACGATGAAGAATCTTTTCAACAAGGACATGATGCCACCAACACCGCCACAAACAAATCCGTCACAAACTCAAGCCAATCCCGGAATGTCTGGTGGCAGTCTGATTGTTAATCCATTCGTTTCACCAGATTCATCACCGACTGGTCCACCATCTCAAATAACTCGAACATTAGATCAGTCACCAGTTGGAAATTCAATTCCTCTTCAACCATTTCCACCTACACCACAAGAGTCGCCAAAGAAAAATTCCACTTCAAATCAAAATCATGTAACGCCACAGCACAATAATATGCAGAATGGACCTGTAAAGATGGTCATCAAGAATGGTGTTTTGATGCCAAAACAAAAGCAACGCAGGTATCGTACTGAGCGACCATTCGCATGTGAACATTGTGCTGCAAGATTCACATTGAGATCGAACATGGAACGTCACATTAAACAACAACATCCTCAATTCTGGGCACAACGTCAGCGTGGCAATCATGGATTAATGAGACGTGGTCCAGCACCTCAAATGTCAATGAATAATTCAATGATGCCAACTCTTCAAGCTTCTGGTTTTGGTGGAATTTCTGAACAAGTCAAGTACGCAATTCTCGCTCAGCAGCTTAAAAGTCGCGAGAGTCCAAAAAATCTGATGTCACAGCCATTTCATCACATGCCACTTCCACTTCAAACACAATTGACAGAATTGCCAATCGATTCAAAGGAAGAACCAGAAACAACCAAAACACCAGCTCCCGCAAATGATGATGATGACGATCAACAGCTAATTATTGATGAAGATTTTCATGCCGAAGATTTGAGCAAATCATCAGATGGCAACGAAAAGAATTTGGCAGCGCGCAAAGTTGCTGAGAACATTTTGGAAGAAGCAAGAAAAATGAGCAATGAAAAGCCTAATAATGAAATGAAAAGCTCAAAACAAAGAACTCCAACAATCAGCTCAGATGCTGATAGCGAGAAAGAATCTGACAGAGATCATAACAAAGATATCAAGGAAGAAACTAATGACCTGGTTTCCGTTTCTAAACTTGTTGATAATGCAACAAATTCACTCGTGTTCTCAAACTACTTCAGTCGCCCAGAACCCCCAATAGCTGATCACAGCGATGAAGAAGGCCTTGTGGCATCAGGAAGTGCATCGGAAAGCAACAATTCTGGTACAGATGATCCGAATCCATCCAGTTCGGGAAAGGAAAAGAAAAAGTCTGCTTACAGTTTGGCACCGAATCGGGTTTCATGTCCATACTGTCAGCGCAAATTTCCCTGGTCCAGCTCATTGCGTCGCCATATTTTAACACATACTGGACAGAAGCCATTTAAATGCTCACAATGCCCGTTGCTCTTTACTACGAAAAGTAATTGCGATCGACATTTGTTAAGAAAGCATGGAAATGTTGAATCAGCTGTTTCATTGCAATTGCCAATTGATGAAATGCCTGAACCGGTAAAAGAACCAGTTAACAAATCATCTTCACACCAGCATAGCTCATCGGATGAAGCTCCTAAGCAAGCTCCAATATCATTCAACCTTCCATCAGCTTTGCAAATGCCAACAATTAAACCAGAAACAAATTCCTCATCACCGCAGCAAAATGCATTAACTCAATCGACTCCAGTCATGTCGAGTGATTTACCATTCAAATGTCACTTGTGTGATGGCTCATTCACTGATCGTTTCGGATGCTTGGAGCATATCAAAGTCATGCATTCACAAGATTTCGCTGTTTTGATTTCTAAAGTTCAGCTGGAGAATGAAGATGGCGTTAACGGTTCACCAGATGATGAAGATCTTGCTGATAAGAAAGGCAAATATCCTGATTATGCTAATCGCAAAGTCATTTGTGCATTTTGCGTTCGTCGTTTCTGGTCGACGGAGGATTTGAGACGTCATATGCGTACACATAGTGGCGAACGACCATTTAATTGCGACGTGTGCTTTAGAAAGTTCACATTGAAGCATAGCATGTTACGTCATCGCAAGAAGCATTCGAACGCGCCACATTTAAGTACCATCGTTAATGGCAATGGCTCGAGCATTAACAATAGTGCCTCAGACATGTCGGATGACGAATCAACAGCAATCACCATGATCAACCATAAGAAAATGATGGAAATGATGCCAGAATCCATGAAACAAGATCAGCATTCATTGAATCATCTTTTGAATCCTTTTAATAAAGAATTGTTTATGGAGCTTCAAAAGAAACTTTTCAATCGGCAGCAGCAGTTAAATGGATCAGTCGGTTCTGATTTGTTAGGCAATTTGCTTGGCATCAGCGACTTGGGAATGCTGAACAAAATGATCTCATCATCAGCCGACGAAGCTGCCAAAATATTGTTCGACAAGTAA
Protein Sequence: MERRASTNSESSVEPAEVSSSNKTLSSDANSSLALKTSQDSDNIESDENDDYLNNNNTSKMNKNDDNETSNGPLIETKNSSSYSNSTDNKDTIVRRDNLRQLMDKMLQKKILNASRNNNNSSEENLNANMDTSENFERKSSDDAKYVCPICETISNTQHEFTNHIRSHNNIRDASDDATTFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCNLTFTTNGNMHRHMRTHKQHPSNDRESYESDGSTDSSGSSHGGIRKLFKANTTFPHKRKSTDDDVNNRRKIRAVNHNNNNIMSPNSQQKFCCPVCVRNDFSSMINLENHMDKEHPTIPAKCRHCEMVFKSHKALNSHRCGHNKSQNIQQGFKDLSAYVDFSCEKFPMIAKSMCEQSIRTPITNQKYECPMCYRAFPCASSVEIHMKECKNENHLAQDFSGKRQRTESESSEEDIKREDFFANLALQNRSIPTSAPSTPSSNADKSFTSPSTMMIKQELRATPPFYQYFSEGRDFADVESMIRATSSGGLDKPINENDQHLYNREEDEVQDEFTHEFRKMKLRGEFPCRLCTMVFPNLRALKGHNRIHLSASGPGPYRCNMCPHSINDKAALIRHMRTHNGDRPYECALCNYAFTTKANCERHLRNRHGKSTRDEVKRSIIYHPSEDSTVEDPSKKIAMYQTNRMRKQDEHSNDRTTPVSHLKDILQPQDDSPSRIQVKSLDKLKSQQNFENDIEEELSESHRPMDLSMDALDLSKKTDSFANNGEDASDEDDEDDLENNDEMDQPEIPKFDLTMFEKNPHFLFMQQQLLNDALPKLDPAQMFNLAQIYRTFGFPTPGFPIHPLLLQNPLLLNDTMKNLFNKDMMPPTPPQTNPSQTQANPGMSGGSLIVNPFVSPDSSPTGPPSQITRTLDQSPVGNSIPLQPFPPTPQESPKKNSTSNQNHVTPQHNNMQNGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCAARFTLRSNMERHIKQQHPQFWAQRQRGNHGLMRRGPAPQMSMNNSMMPTLQASGFGGISEQVKYAILAQQLKSRESPKNLMSQPFHHMPLPLQTQLTELPIDSKEEPETTKTPAPANDDDDDQQLIIDEDFHAEDLSKSSDGNEKNLAARKVAENILEEARKMSNEKPNNEMKSSKQRTPTISSDADSEKESDRDHNKDIKEETNDLVSVSKLVDNATNSLVFSNYFSRPEPPIADHSDEEGLVASGSASESNNSGTDDPNPSSSGKEKKKSAYSLAPNRVSCPYCQRKFPWSSSLRRHILTHTGQKPFKCSQCPLLFTTKSNCDRHLLRKHGNVESAVSLQLPIDEMPEPVKEPVNKSSSHQHSSSDEAPKQAPISFNLPSALQMPTIKPETNSSSPQQNALTQSTPVMSSDLPFKCHLCDGSFTDRFGCLEHIKVMHSQDFAVLISKVQLENEDGVNGSPDDEDLADKKGKYPDYANRKVICAFCVRRFWSTEDLRRHMRTHSGERPFNCDVCFRKFTLKHSMLRHRKKHSNAPHLSTIVNGNGSSINNSASDMSDDESTAITMINHKKMMEMMPESMKQDQHSLNHLLNPFNKELFMELQKKLFNRQQQLNGSVGSDLLGNLLGISDLGMLNKMISSSADEAAKILFDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -