Basic Information

Insect: Propsilocerus akamusi
Gene Symbol: -
Assembly: GCA_018397935.1
Location: CM031469.1:1549984-1551700[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 7.9e-06 0.00039 20.4 1.1 3 23 274 294 273 294 0.98

2 9 0.00056 0.027 14.6 0.3 1 23 301 325 301 325 0.95

3 9 0.005 0.24 11.6 4.5 1 23 331 353 331 353 0.98

4 9 0.00044 0.021 15.0 4.3 1 20 359 378 359 381 0.93

5 9 3.9e-06 0.00019 21.4 3.8 1 23 387 409 387 409 0.99

6 9 4.4e-08 2.2e-06 27.5 1.4 1 23 415 437 415 437 0.98

7 9 0.00061 0.03 14.5 2.7 1 23 444 467 444 467 0.91

8 9 3.5e-06 0.00017 21.6 3.5 1 23 473 495 473 495 0.97

9 9 0.00021 0.01 15.9 1.7 1 21 501 523 501 524 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	7.9e-06	0.00039	20.4	1.1	3	23	274	294	273	294	0.98
2	9	0.00056	0.027	14.6	0.3	1	23	301	325	301	325	0.95
3	9	0.005	0.24	11.6	4.5	1	23	331	353	331	353	0.98
4	9	0.00044	0.021	15.0	4.3	1	20	359	378	359	381	0.93
5	9	3.9e-06	0.00019	21.4	3.8	1	23	387	409	387	409	0.99
6	9	4.4e-08	2.2e-06	27.5	1.4	1	23	415	437	415	437	0.98
7	9	0.00061	0.03	14.5	2.7	1	23	444	467	444	467	0.91
8	9	3.5e-06	0.00017	21.6	3.5	1	23	473	495	473	495	0.97
9	9	0.00021	0.01	15.9	1.7	1	21	501	523	501	524	0.93

Sequence Information

Coding Sequence: ATGTTCGCCTTAAGCGACTTATGTAGACTGTGTTTGGTTAACTGTGGCTCACTTGGTATAATTGTATACCAGAATGATATCAGACGTGATAAAATAAGAGACTGTCTATCAATAATTATTGCAGATGACGTCCGTTTTCCACTGATTATATGCACTGACTGTGATAGCAAACTAGATTGCTTCTATCAATTTCGCAAAGAATCTGTTAGAGCTCAACACGAGTTTGCTGGATACATTCTCAAAACCATTGAACCAGCAGCGATAGATTATGAAGCAATTCGTTACTATCCATCAAATACACCGAACTTGGAACCTATCAGAGGAATCGATGAGAACTTGTATGAAAGCGTTGATATTTATTCTAACGCCTCGGCTCCGCCAGCAACAATTCAAAGTTCGAATGACTACAATAATGAGTGTCCATATATTCTCCATGAACATGGTCTTCATCTGGCGTTAGATGATGATGATAATCACAATGATGACCAATCAGTCATAACAAACAATGATAATATATATCAACAACTCACTGTCCACCGACCTGAAGTGAGTCCAATTTCTCAAGGGCCCGCAACTCCAACGCCACTCGTTCAGCAACCACAAATAACACCGCAGCCAACTGAACAAATTCAGCACTATCCAGAGATTCTATCGGAAGCATACATGAATGATGAAATTGATAATGACGATTTTACATATGATGATTTCGATGAATCCTGTCAGTCAGCACCCACTGATAGAAATAATGTTGACAATGCAATTGATAAGAAAATAGAGGAATTTATTCTCAACAAAGGCAACAAAGCAAATCCAAAGATTTGTTCCATATGCAATAAGCTCTTTCGTACCAACTATAAACTTCGAATACATATGGAAACACATTCGGAGAACAACGCAAAATTCATCTGCAACTCTGAAGGATGCACAAAAACATTCAAATCAAAAATCGGACTTCAAGAACACGCTGCAAAACATACTGGCGAATTTAATTTCACGTGCAATATATGTCATAAGCAGTTCCTATTGCGAAGCTATTTTATGAGTCATCAACGGATCCATTCAGACCAGAAGATATTTTCTTGCTCGATATGTCCGAAACATTTCAAAAGCAAACAAAATTTGATTGATCATGAAAATTGCCATTTGGGTTTGAAACATTTTAAGTGTCCAAAATGCCAGCGAGCATTCAATACAAAAACTCATCTTGATCTTCATATGAAATCGCACAATAATTCCGAGGAATTTGAATGCTCTGTCTGTAATAAAGCTTTCAAATCGAAAAGTTATTTACGCGTTCATATCAAAACGCATTTTGACGAGCTTAAAAATTATACTTGCGGTTATTGTCGCAAAAATTTCATTCAACTTTCTGATCTAAAAATTCATTGTAAAAGCGTTCACACAAATGAACGCGATTTCTGTTGTGAGACATGCGGGAAAACATTCTCTCGAAAGGATTCGCTGGCACTTCACAGCAAAACCCATACAAGTGCAAATGCGTTTGTTTGCGACAATGAAAACTGCAAGAAATCCTTCACTAGAAAAACAACATTGATGAATCATAAAAAGAGATGCTTCACTGAAGGCTATCGAAAATGA
Protein Sequence: MFALSDLCRLCLVNCGSLGIIVYQNDIRRDKIRDCLSIIIADDVRFPLIICTDCDSKLDCFYQFRKESVRAQHEFAGYILKTIEPAAIDYEAIRYYPSNTPNLEPIRGIDENLYESVDIYSNASAPPATIQSSNDYNNECPYILHEHGLHLALDDDDNHNDDQSVITNNDNIYQQLTVHRPEVSPISQGPATPTPLVQQPQITPQPTEQIQHYPEILSEAYMNDEIDNDDFTYDDFDESCQSAPTDRNNVDNAIDKKIEEFILNKGNKANPKICSICNKLFRTNYKLRIHMETHSENNAKFICNSEGCTKTFKSKIGLQEHAAKHTGEFNFTCNICHKQFLLRSYFMSHQRIHSDQKIFSCSICPKHFKSKQNLIDHENCHLGLKHFKCPKCQRAFNTKTHLDLHMKSHNNSEEFECSVCNKAFKSKSYLRVHIKTHFDELKNYTCGYCRKNFIQLSDLKIHCKSVHTNERDFCCETCGKTFSRKDSLALHSKTHTSANAFVCDNENCKKSFTRKTTLMNHKKRCFTEGYRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -