Paka002029.1
Basic Information
- Insect
- Propsilocerus akamusi
- Gene Symbol
- hang
- Assembly
- GCA_018397935.1
- Location
- CM031470.1:9923792-9929427[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.0059 0.29 11.4 0.8 3 23 260 281 259 281 0.95 2 20 5.9 2.9e+02 2.0 3.8 2 22 346 366 345 366 0.93 3 20 0.29 14 6.1 0.5 2 21 375 394 375 395 0.93 4 20 0.022 1.1 9.6 0.3 1 23 437 460 437 460 0.94 5 20 0.0064 0.31 11.3 0.1 2 23 501 523 500 523 0.90 6 20 0.00083 0.041 14.1 0.6 2 23 562 584 561 584 0.94 7 20 0.00054 0.027 14.7 0.4 1 23 592 617 592 617 0.98 8 20 0.075 3.7 7.9 0.2 1 23 644 668 644 669 0.94 9 20 0.00023 0.011 15.8 1.2 1 23 722 745 722 745 0.97 10 20 0.74 36 4.8 0.5 2 20 753 771 752 775 0.93 11 20 0.00097 0.047 13.9 1.5 1 23 826 849 826 849 0.98 12 20 3e-05 0.0015 18.6 2.8 1 23 899 921 899 921 0.98 13 20 0.0015 0.073 13.3 2.5 1 23 933 956 933 956 0.96 14 20 0.00037 0.018 15.2 0.0 2 23 964 986 963 986 0.94 15 20 5.6e-05 0.0027 17.8 0.4 1 23 1047 1069 1047 1069 0.93 16 20 0.00053 0.026 14.7 1.9 2 23 1111 1133 1111 1133 0.93 17 20 0.43 21 5.5 0.1 2 19 1152 1169 1152 1172 0.88 18 20 0.0045 0.22 11.8 0.7 2 23 1191 1212 1190 1212 0.96 19 20 0.016 0.8 10.0 0.1 1 23 1274 1296 1274 1296 0.95 20 20 1.2 59 4.1 2.2 2 23 1427 1449 1426 1449 0.94
Sequence Information
- Coding Sequence
- ATGAGTACGATGCAGAACCAGAGTCCTGGGCGGACATGTTGTCGGTTATGCTTGGCATCGGAAAGTGAATGCGTTGAGATCTTCAAAACACAAGCTGCTGACAAGCAGCCAATCCATACAAAAATCACCTCCTGCCTACAGATTCAGGTCACTGATACGGACAAATTATCCGTTAATATATGTCACGCTTGCATTAGCTACCTGAACAGTTGGCAGAGCTTCAAGAATCGATGCGATGCAGCACAACGCAAACAGAAAATCTGGCTTTCGGCATCAAATGATGGAAAGTCGTTGTCGCAATCGACCGGACAATCGCTGCTAAAAACGCATTTAAATGGGCATCATGACAACAATCAGTTGAAACCAGCAATTGAAAATGCACAGCAAAAATTTCATCAAAAACAAGCGGAGCTGCAACAGCAGAAACTTAAAGAGCTTGTCGAACAACAGCAACGTCGTCAAACAAAAGCTGGCGTCGATACAAGCTTCATTAAATCCGAGCCAGCGTCAGATGAAGAGGAGGATGCTGAAAATGTTGAAATGGATTTGGATCCATCGCAATTTTTGGCACAATACAGCTCCGGTGATGAAACGGACGATGAGACACGGGCATTAAATGGTCATCATAATGGCACTGGACCACCAATACTTACATCACTCGGTTTGACAAGCGTCCATCATCCGTTTTCCAGCTACATGAATTCCGATGACTCAACGAACGATGATAGAGCAAGCGAGATCTCAAGTAATGGCGGTAAGGCTCAAGTACCCGCCAATTGTAACGTTTGTAATCTGCAGTTTTCGAATCGAGCAAATGCTCGCCGGCACGAAAAGAACATTCATGGTATACAGCTGGCACCATCTATTGCATCGACGCCTTCGACTACACCAAAACCACCAGCAGCAAAGAAATCAAAAGTTCAAACGTTAAATATTGATTATACAAAACCTGAAATGTATAGACATCTCCTGACACCATCAAAATTAACATTTATTCTGAGCAATATGAACTTCCTGGAGCAGGCACAAGATATGCGTTGCAAGTGCTGCAACAAACAATTTCCATCCTATAAATTCTTCATGGGCCACATGCGCAAAAAGTATCAAGGACTACCGCGAAATGTTTGCTTTAAATGCTTGAAGCAGTTCGACAGTAAAGGACAATTCATTGGGCATCTTAAGCGACCTGGCGGTACATGTCCGAATCTCTATCGTCTCGTGATGGCCGACGAAACCATTCCAAAGAATTTGATTACGACTGATACAAATTTGCGAACTCCAGCCAAGGACATACTCGCGAATCGTGTGTATGCTTGCGCAATATGTGACGACACGTTCCGGTTGAAATCAGATTTTCGCGAGCATGTGTATCGGGTCCACACTGAGGTGACAAAGAATCGAGAGACACCAAATGCGAGTTGCATTAATTGTAATGAAGCCTTTACTGATTCAGCGGTTCGTCGACGTCACTTCAATAATCTCGATTGCATTGTCTACATTGTTTGTAATACTTGCGGCGAACAATTCCCATCTCAAGCGAATTATCTCGAGCATGTCTATCAGACGCATCTAAATTCAAAGATCACAGATGCTGGTGATGACATTTTGTTCGAGGAACCGCCGGAAGTATTGGATGTGACACCAGTACCTGTGAGTGGAACAACACGAGTGACGAGCGCTCAGAAATGTCCCGTATGTCAGAAACAGTATAACAATTATTATAATGTTCTTCGACACATGGAAGCTAAGCATCCTGATCAAGTTCCTCAAGTTTACAAATGCCCTGATTGCCCTGAAGAACAAACATTCAGCAAGCAAACATATCTTCGTGACCATCTAATGAAAGTTCATGGGAAAGTGGATTTGTCACCAAAGCAGCTTGTGCAACATCAAATTCAGCCCGTCGGAAGTATTCAGAAATTGCCGGCGTATGTTTGCAAAGCACCAGAATGTGGAGCGGAATTTCGCGAAAAGGCGAAATGGTTGGATCATCAAACGGAACATCATAGCGGCGAGTTTTGGTGCATGTTCTGTGACCATCACGATGTTCATCGTGAAGAATTTGAAAGTCATTTAGAAAATGTCCATCAAAATGGACAGCATGTGGCAGCAGAGTCCGATGACGATGATAAAACGAAAGCTATTTCGGATGAACCGAAATCCTTCAAATGTCGAATGTGCAACAAACGTATTGCAACAAAAACTGGTCTCCAGAAGCACATGATCAAGGAACATGGTGTTGGTGGTGAGCTGGTTAAATGTACTTTGTGTCCTGCTGATTTTGCAAATGATAAAGGACTCAAAGTTCATCTTTGGCGTTGTCATGAAATCCGTGAAGCTGATTACGAAAATGTCCTACCGCCAGATCTTCTCGATCCTTACACTCAGCAACAACGTAAACTGAAGCAAGAAGAAGAACAAAAATCAATTCTTATGGCAAATGAATCTGGCTCGAAATCTGTGGCGAAGAAAGTTTATGAATGTCCATTCTGCCATATCGTTTATCACTCCAGAGATGAGCTAGTGGATCATCAGAAATCAGTTCATGCAATCGACGATCCCGAAATAATGGAACCCGAAGATTATATACCAGATGAAGGAGACAGTGAAATGATTGACATTAAATCCGTTGATCATGTGACTGGAGCCGGTGATGAGCCAATGACAGAACCCGAACCAGACAATGAGTATTGGTTCCAATGTCGATTATGTCAGAGATCATTTAACTCATCAAAGAAGCTTACAATTCACATGAACAGTCATCAAGAGGGTGGACAACCTGACCAGAGCAATGGTTATCCATGTAAGGAGTGCAACATTATTTACAAAAGCAAGAAATCATTGTGGGTTCATCGTCATAAAAAGCATCCGCGTCATCCGGATCCATCGCCATGTGATGTATGCCAGAAAGTATTTTTCGATGCATCTGAGCTCGCAACTCACCTCTTGCAAGTTCATAATCAAAGCAAACCAGCCGAAGCGGCATCGGAATCGATGGTCGAATCATTTATCTCTGAAGGTCATTGGCTTTTGGATTCATCGACAGAACAATCAATGAAGCCGCCATTGGATGGCATGAACAATTCACTATCAAGAAAGCGTAAACGCGCTGCCCCATCAGAAACAGCTGACGGGCAATATGCCTGTGACATGTGTCCGAAATGTTTCTCGAATGCAAATGCACTTCAGGTTCATCGTGGTTGGCATTTCCGGTCGCCAGATGGACGTAAAGTAAAAGATCCATCACAAATGTGGCATCCCGATCAAGTACCGCCAAGTAAAGTACGTCGATCTGTCCCACCAACGCCAGCACAGTCATCATCATGTCCCGTTTGTCCGCATTGCAATTCGAAGTTTGCGAGTCACAACAATTTGCGACGTCACATAATTGAAGTTCATAAAACGCGCGATGAAGCCCATTCAGAAGGTGGTCAGAAATTGGATCGAGTTGGTGAATGTACAAAGTGTCAAATAACATTCAAAACTGTCGCCGAATGGGTCGATCACAAGATAAATGATGCACGTAATCGCAAAACAACTGTTAATGTTGCTGGCCAAGGATATGAATGGTCTTGTGACATCTGTATGAAATTGTTTACTCGCAAAGAACGTCTTATGCAACACATGCTCAGCCATTTGAATGATCGCGATATGGATGAAGAAATTATTGCAATCAATAAAAGTCAAAAGTCTGATGAACCGCACGAGAATGGGAAATACGATGAGTCACACACTGATGATGATTCGTCAGCAAGTAACGATGAAGATGATGAAGAAATTGAAGGTAGCGATGAGATTGAAATAAAGCAGGAACGAACATTTAGCTGTGAGCTTTGTCGTGTTGACTTTGCATCGTCGCAAGATTTGCGATCGCATGTTGCCGAACATTTTTTGAATGGCGGAATAACAGCAATGTCCGCACGTCCCGAAGTAGATTCCAAAGAACCTACCGATGATGAGAGTGAAGACGCACAAGAAGAAATTGATGATGATTTGGAGCAGGAACTAGATGACATTGAAATAGAGGAAGCTCAAGTCGATTACGAGCAGCCAATTCATGTTGCTGATGATGAAGATGATGAAAATTCAAATTCCAGCGAAAGCACATCAGGCAACAGCATGACATCAGCTGAACAAATTCCAGCACCACAAAAGCATTTCGCGCCAATTCCAAAAGTTCAAGTCCAAATTCATCGATGTCGTGTATGCAACGCTCCATATCTTGACGGCAATAAAGCTATTGAATGTATGTCGAACCACCAGAAACCATCGAGCTCAAAATGTAGCGATTGTCAGCTGTTCTTCCTTGGACCAAAACAGCTTCAGGATCATCGTCAGTTGTGCCATTAA
- Protein Sequence
- MSTMQNQSPGRTCCRLCLASESECVEIFKTQAADKQPIHTKITSCLQIQVTDTDKLSVNICHACISYLNSWQSFKNRCDAAQRKQKIWLSASNDGKSLSQSTGQSLLKTHLNGHHDNNQLKPAIENAQQKFHQKQAELQQQKLKELVEQQQRRQTKAGVDTSFIKSEPASDEEEDAENVEMDLDPSQFLAQYSSGDETDDETRALNGHHNGTGPPILTSLGLTSVHHPFSSYMNSDDSTNDDRASEISSNGGKAQVPANCNVCNLQFSNRANARRHEKNIHGIQLAPSIASTPSTTPKPPAAKKSKVQTLNIDYTKPEMYRHLLTPSKLTFILSNMNFLEQAQDMRCKCCNKQFPSYKFFMGHMRKKYQGLPRNVCFKCLKQFDSKGQFIGHLKRPGGTCPNLYRLVMADETIPKNLITTDTNLRTPAKDILANRVYACAICDDTFRLKSDFREHVYRVHTEVTKNRETPNASCINCNEAFTDSAVRRRHFNNLDCIVYIVCNTCGEQFPSQANYLEHVYQTHLNSKITDAGDDILFEEPPEVLDVTPVPVSGTTRVTSAQKCPVCQKQYNNYYNVLRHMEAKHPDQVPQVYKCPDCPEEQTFSKQTYLRDHLMKVHGKVDLSPKQLVQHQIQPVGSIQKLPAYVCKAPECGAEFREKAKWLDHQTEHHSGEFWCMFCDHHDVHREEFESHLENVHQNGQHVAAESDDDDKTKAISDEPKSFKCRMCNKRIATKTGLQKHMIKEHGVGGELVKCTLCPADFANDKGLKVHLWRCHEIREADYENVLPPDLLDPYTQQQRKLKQEEEQKSILMANESGSKSVAKKVYECPFCHIVYHSRDELVDHQKSVHAIDDPEIMEPEDYIPDEGDSEMIDIKSVDHVTGAGDEPMTEPEPDNEYWFQCRLCQRSFNSSKKLTIHMNSHQEGGQPDQSNGYPCKECNIIYKSKKSLWVHRHKKHPRHPDPSPCDVCQKVFFDASELATHLLQVHNQSKPAEAASESMVESFISEGHWLLDSSTEQSMKPPLDGMNNSLSRKRKRAAPSETADGQYACDMCPKCFSNANALQVHRGWHFRSPDGRKVKDPSQMWHPDQVPPSKVRRSVPPTPAQSSSCPVCPHCNSKFASHNNLRRHIIEVHKTRDEAHSEGGQKLDRVGECTKCQITFKTVAEWVDHKINDARNRKTTVNVAGQGYEWSCDICMKLFTRKERLMQHMLSHLNDRDMDEEIIAINKSQKSDEPHENGKYDESHTDDDSSASNDEDDEEIEGSDEIEIKQERTFSCELCRVDFASSQDLRSHVAEHFLNGGITAMSARPEVDSKEPTDDESEDAQEEIDDDLEQELDDIEIEEAQVDYEQPIHVADDEDDENSNSSESTSGNSMTSAEQIPAPQKHFAPIPKVQVQIHRCRVCNAPYLDGNKAIECMSNHQKPSSSKCSDCQLFFLGPKQLQDHRQLCH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -