Basic Information

Insect: Propsilocerus akamusi
Gene Symbol: -
Assembly: GCA_018397935.1
Location: CM031470.1:7240544-7243591[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00016 0.0077 16.4 0.1 3 23 105 125 104 125 0.97

2 12 1.9e-06 9.3e-05 22.4 1.1 1 23 131 153 131 153 0.99

3 12 8.2e-06 0.0004 20.4 2.4 1 23 159 181 159 181 0.98

4 12 0.00057 0.028 14.6 1.9 1 23 190 212 190 212 0.98

5 12 3.9e-05 0.0019 18.3 1.6 1 23 218 240 218 240 0.97

6 12 0.00017 0.0085 16.2 1.2 1 23 247 269 247 269 0.99

7 12 2.4e-05 0.0012 18.9 1.6 1 23 275 297 275 297 0.98

8 12 0.00011 0.0054 16.8 0.4 1 23 304 326 304 326 0.99

9 12 5.8e-07 2.8e-05 24.0 3.8 1 23 332 354 332 354 0.98

10 12 0.00086 0.042 14.0 0.1 1 20 360 379 360 382 0.94

11 12 7.8e-06 0.00038 20.5 1.1 2 23 389 410 388 410 0.97

12 12 3.1e-06 0.00015 21.7 1.7 1 23 416 439 416 439 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00016	0.0077	16.4	0.1	3	23	105	125	104	125	0.97
2	12	1.9e-06	9.3e-05	22.4	1.1	1	23	131	153	131	153	0.99
3	12	8.2e-06	0.0004	20.4	2.4	1	23	159	181	159	181	0.98
4	12	0.00057	0.028	14.6	1.9	1	23	190	212	190	212	0.98
5	12	3.9e-05	0.0019	18.3	1.6	1	23	218	240	218	240	0.97
6	12	0.00017	0.0085	16.2	1.2	1	23	247	269	247	269	0.99
7	12	2.4e-05	0.0012	18.9	1.6	1	23	275	297	275	297	0.98
8	12	0.00011	0.0054	16.8	0.4	1	23	304	326	304	326	0.99
9	12	5.8e-07	2.8e-05	24.0	3.8	1	23	332	354	332	354	0.98
10	12	0.00086	0.042	14.0	0.1	1	20	360	379	360	382	0.94
11	12	7.8e-06	0.00038	20.5	1.1	2	23	389	410	388	410	0.97
12	12	3.1e-06	0.00015	21.7	1.7	1	23	416	439	416	439	0.97

Sequence Information

Coding Sequence: ATGTTTGATCAGATCAAAACCGAGCCATTACATTTTTATCAGTCATCGTGTCCGACTCAAATTTTACCGCATCAACAGTCAAATGTCAGTGTCCTTCAGCAAAACCTTGTACAAAATCCACAGCATGCAAGCGTTATCGCAATCAATGACGACAAGGGTAGTCTACAAGTGAATCATACCGATAATGTGATACCAACGTTGGTTGATCAAATTAAACCCGAACTAATGCAGCCGTTGTCACAACAGCAGCAAACTGTCCATCACTCAAATATGAGAATGGTGTCGTCGTCAAGAGGCAGTAAACCGCAGGCCTGCAAAGTTTGTGGTAAAATTCTGTCTTCAGCAAGCAGTTATTACGTTCATATGAAACTACATTCAGGGACGAAACCATTTCAATGTTCCGTTTGCGAGGCTGCGTTTTGTCGAAAGCCATATCTAGAGGTTCATATGCGAACCCACACTGGCGAACGACCATTTCAGTGTGACGTTTGCATGAAGCGCTTTTCTCAGAAATCGAGTTTAAATACACATAAAAGAATTCACACAGAAACAGTTCAGGATCGGCCATTTCACTGTGATCAATGTTCGGCAGCATTTTCACGAAAGCCATATCTTGATATTCATAAAAGAACACACACGGGAGAACGACCTTTTCAGTGTCTGGTGTGCTTGAAACGGTTTACACAGAAATCCAGTCTCAATATTCACAAGACCATTCATACGGCTGGACACCGTCCGTTTCAGTGTGGCCAATGCCCGGCAGCTTTTTGCCGAAAGCCATATTTAGATATTCATAAACGAACACATACAGGAGAGCGACCTTTTGAGTGCGAATCGTGTCTCAAACGATTTTCTCAGCGTTCAACTTTAAATATTCATAAAAGAATCCATTCGGTGCAAGGACGGCCATTTCAGTGTTTGGAATGTCCAGCTGCATTTTGCCGTAAACCATATCTTGACATTCATCTCCGTATACACACGGGCGAAAAACCTTTCGAGTGTGATGTTTGCAAAAAATGTTTTACCCAAAAATCGAGTTTAAATATTCATAAACGTATACATACAGGAATCAAGCCGTACGAATGTGATATCTGTGGAAAGTTATTTGCTGTTAAGAGCTATGTTACCGCTCACAGGTGGTCGCATGTATCTGAGAAGCCCTTAAGCTGTGATCGTTGTTCCATGACATTCACTAGCAAATCACAATTTGCGGTTCATATACGCACTCATTCTGCTGGGCAGAACTACGAATGCAATCTGTGTGGACGTACCTTTATTCGTGATAGCTATTTGATACGACATCACAATCGAGTGCACCGTGATCGAGTACAAACTTCAAGCACAATTAATGCTACAATTAATGCAGTTATAGCCGCTGCTGCATCGAGTGGCCCTTCAAATCAATCAAACGGTATTTTTAATAATGACGGTCAAGTAGGTGATTTAAGCCAATACGTGACTAATCTTGCGGCGAGTGTTGCCCGACAACAAAATCGAATGATCCATCGCTCTATTCAAAACCTACCTGCAGGAAATGGTAGTAAAGAAAGCGGCTCATTACGAAATGTTATGTAA
Protein Sequence: MFDQIKTEPLHFYQSSCPTQILPHQQSNVSVLQQNLVQNPQHASVIAINDDKGSLQVNHTDNVIPTLVDQIKPELMQPLSQQQQTVHHSNMRMVSSSRGSKPQACKVCGKILSSASSYYVHMKLHSGTKPFQCSVCEAAFCRKPYLEVHMRTHTGERPFQCDVCMKRFSQKSSLNTHKRIHTETVQDRPFHCDQCSAAFSRKPYLDIHKRTHTGERPFQCLVCLKRFTQKSSLNIHKTIHTAGHRPFQCGQCPAAFCRKPYLDIHKRTHTGERPFECESCLKRFSQRSTLNIHKRIHSVQGRPFQCLECPAAFCRKPYLDIHLRIHTGEKPFECDVCKKCFTQKSSLNIHKRIHTGIKPYECDICGKLFAVKSYVTAHRWSHVSEKPLSCDRCSMTFTSKSQFAVHIRTHSAGQNYECNLCGRTFIRDSYLIRHHNRVHRDRVQTSSTINATINAVIAAAASSGPSNQSNGIFNNDGQVGDLSQYVTNLAASVARQQNRMIHRSIQNLPAGNGSKESGSLRNVM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -