Paka000643.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Propsilocerus akamusi
Gene Symbol
-
Assembly
GCA_018397935.1
Location
CM031470.1:2215994-2219648[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 29 0.14 7.1 7.0 0.1 2 23 26 46 25 46 0.96
2 29 0.00095 0.046 13.9 3.0 3 23 54 74 53 74 0.96
3 29 4.1e-05 0.002 18.2 0.5 3 23 82 102 81 102 0.99
4 29 4.6e-06 0.00022 21.2 2.9 1 23 109 131 109 131 0.99
5 29 0.11 5.3 7.4 0.5 2 23 139 158 138 158 0.92
6 29 3e-06 0.00015 21.8 0.7 1 23 164 187 164 187 0.98
7 29 0.0028 0.14 12.4 0.8 3 23 195 215 195 215 0.99
8 29 9e-05 0.0044 17.1 0.4 1 23 241 264 241 264 0.95
9 29 0.0025 0.12 12.6 0.3 1 23 270 293 270 293 0.94
10 29 0.0011 0.055 13.7 0.5 1 20 324 343 324 345 0.95
11 29 2 98 3.4 2.1 1 23 507 531 507 531 0.94
12 29 0.014 0.69 10.2 1.3 2 23 538 560 537 560 0.95
13 29 0.0019 0.094 12.9 0.1 2 23 580 602 580 602 0.95
14 29 0.017 0.84 9.9 0.3 2 23 615 637 615 637 0.95
15 29 8.4e-05 0.0041 17.2 3.3 1 23 642 665 642 665 0.98
16 29 4.3e-05 0.0021 18.1 2.2 1 23 671 696 671 696 0.94
17 29 0.016 0.76 10.1 0.5 2 21 705 724 705 727 0.88
18 29 0.00013 0.0064 16.6 0.4 1 23 732 755 732 755 0.95
19 29 0.0013 0.064 13.5 3.3 1 23 761 786 761 786 0.95
20 29 0.0033 0.16 12.2 1.4 2 23 799 821 798 821 0.95
21 29 0.0066 0.32 11.3 2.4 1 23 830 853 830 853 0.93
22 29 0.99 48 4.4 1.1 2 23 862 884 862 884 0.96
23 29 0.018 0.87 9.9 0.2 1 23 888 910 888 910 0.96
24 29 2.9e-05 0.0014 18.7 3.2 1 23 920 942 920 942 0.99
25 29 0.015 0.71 10.2 0.4 1 23 948 970 948 970 0.90
26 29 0.0063 0.31 11.3 3.3 1 23 976 998 976 998 0.98
27 29 3.7e-05 0.0018 18.3 2.0 1 23 1004 1026 1004 1026 0.99
28 29 0.11 5.3 7.4 0.4 1 22 1031 1052 1031 1054 0.90
29 29 1 50 4.4 1.8 5 21 1064 1080 1061 1081 0.89

Sequence Information

Coding Sequence
ATGGATTCAAATGCATTTAATGACGGTTTTCATGATTCGGAAGAGATAATTGCATCTTCTGGTGGCCTGCTGGTTGTTTGCGAAATCTGTGGATCCACTGTAAATCGGTTGGAGTATGAGAGACATCTGAAAACGCACAAGGAAAAACGAGTGGAAATATGTAAAATCTGCTTCAAGACTTTTACTAACATCTCCAACTTTAAGTATCATCTAGCTCATCATGGAACAGAGCGGCCTTGGCTTTGTAATGAATGCCCAAAAAATTACAAGACAAAAATAGATTTGCTTCAACATCAGCGAGTTCACGATAAGGAGAAGGATCCTTTTCGTTGCGATGATTGCGGTATGTTATTTCGTACCAGATCAAACTTCAATACGCACAAAAGAACACACAATCAAGTAAAAGGCCCTCAAAAATGTGTTTTATGCGATAAAATGTTCGTGAACTTGCGATCCCACATACAAATGGTTCATCAGAAAATTCGAAAGTTCCAATGCTCGATTTGTGATAAGAGTTTTGGCAAGAAATCTGGATTGGATCGGCACACAATGACGGTGCACGAGAAAATGAGAATCTGGGGCTGTGATTTATGTTCCAAGAACTTTGGCGAGAAAGCTCAGCTTCTTAGACATCGAAAAATACATTTTAAGATTAACACTTATGAGCCAGATTCTGAGCAAGGGACTGAGGATAAAGAAATCATGGACGAGAAGAAACGCTATCAATGTGGAATTTGCAAAAAAACCGTAAATTCACGAGCAGCATTAAAACGTCATAAAATGTTGGTACATGAAAAGAAAAGAGACTTTCTCTGCTCGCAGTGTCCTTCGGCTTTCGGTGAAAGAAGTAATCTAATGCGACATATTGCGAAATTTCATTCTACAGAGCAGTTCGTTGATAAGAGCGGAGTTGATGAAGAAGAAGCAAGGATTGATCGAAACGAAATACAATCGGATAACAATGAGCCCTTTCATTGTAAATTCTGCTCAAAGGTATTTGGTACCAAATGGGGTCTTCAAGCTCATCAGGATGGATGCCTTTTGAAGCAACAAATGAAAGCAAACAATCGCTATGACGAAGATAACAGCGATGATGTGTCATATGAAGAAGAAGAAGAATACAGCGAGAATGAACTTGATTATAGTAGCAGCGCAGAAGACTGTTCAGAAACTCATCAAGAACAAAATCTAAGTCTTATGGAACAAGTATTTCTGCCAACTGAAGTTTCAACTGAAGTATTAGAGATCAAGCAAGAGCCGCCGTTTGATGATATTCTTTCGAATCCCAATTTTATTTCCAACGATGATACTGAGAGTCATGAATTGATCGATATGAAAATCAAAGATGAACCCCGAGAAGACGAAGATTTGGAAAGTGATATAAAATTGGAGCCATTTGAAATGCTCGATATCAAACACGAAATAACAGATGCTGCACAAGGTTCTCCGTATGAGGATAGTTATTGTGAAGAAATAAATCTAACGACTGATCAACCCCAAGTAACATTTGCCAAGAGATACAAGTGCAAATTGTGTGTTAATGCCACCTTTAAGGAGATACGATACTTTCGAAGCCACTACAGAACCATTCATTTGAAACCCAAAAAACTTTCTTGCCAATATTGTTCTGAAAACTTCACTTATCGTGCCCAACGATTACGCCATGTTCGGCTGAAACATCCAGAAACATACGAGGATACAATCGATGAGCCTAAGGACAACAAAATATCTGATGCTGAATGTGAACTGTGTAATCGGACGCTGGCTTCTCAGGAATTGCTTGCACAACATATGAAAGCAGAACATGATGACAATGGTAAAGCCGAGGATAAATCAGAAAGAACATGCTCGATTTGTCAAACGATCTTTAAGAAAATCCGCTATCTTATTCTTCATCTTAAAGCTGTTCATTCAGAAGAGTCATATAAATGCGATCGTTGCTTTCGATCATTTAGCTTCAAGAGGTCCCTCGATCGTCATATCAAAACAATTCACGAAGGCATTCGTGATTTTAAGTGCGAAAAGAACGGCTGTGATAAGACGTTCTGCAATAACTACGAACTTCAACAACATCTTATTGGCAATCACGATGTTGGTAATAAAGCACACAGAACCTGTAAGGAATGTTTCAAGGTCTTCAAGAAAGCAAAGTACATGGAAATTCATTTTGCGGGTGTGCATAGTCCGCAAGTCTACAATTGTCCAGTATGTAATCGGGCATTTTCGTTTCGTCGCTCCATGGAACGACATGTCAAAGCAATTCATGAAGACCGGAGAGATTATCATTGTACTGAAGATGGTTGCGATAAATCTTTTCGATCGCGTTATGATATGAATGAGCATCACAACAACATTCATGCTGAAATTAAGAAGAAGCAACCCCTTGATAAGGTGACTTGTGAAATATGCGACAAAGTATGCTCAAGTCGCAAAGTCTTATACTCGCACAGGAAATTAGTTCACGAGAAAGTGCGATGGGGCATCAATTTTCAATGCAAGCTGTGCAAAGAAGTTTTTGAGACAAAATATAAAAAGACAAAACATTGGAGTCAAGTTCACCGGAATGGCGAAATAAAACTAAGAAAATGCTATCAGTGTAATAGTGATTTTCAGCTGTACGTAGACTTCAAAAAGCATATTGAAACTAACCACTTTGGGTGCTTCATTTGTATGATCTGTGGACATTCGCTTGAAGATGAATCAGCTTTATTTATACACAATGAAACACATCGAAAGATCGAGGAAGACTTGAGACAGTTCCAGTGTGATAAATGCTCGCACAGACTTTCCACAAAGGCCCAACTGCAGGCTCATATGAGGAAGCATTTTTCTGGAGATCACTATATGTGTGATATTTGTGGAAAGACTTATCGATTTATTGCGCCATTCCTTTATCACAAGTTGGTTCATGAGAACAAATTTGACTTTGAATGCAGATACTGTGAGAAGAAATTTCGAATGAAGAGAGATCGTATGCTTCATGAACGCACACATACAGGAGAGCGTCCTTATAAGTGTCACATTTGTCTAAAAACATTCTCCCTAAAACCTAATTTGACGGGCCATTTACTAACACACCAAGCAAAAATATACATGTGCAAGACATGTAACTCACAATATGCATCAGCAGCAAAACTTCGTCAACATGAAGACGAAACTCATCCAGAATTAAGACCACTGTTTTGTATAAATTGTCGAAAAACGTTCAAAATGCAACATTCGCTGGATGCACACAACCGAAAGTGCTCTCGAATAAGTTTTGAATTTGAGTCAACGCAAAAAAATTAG
Protein Sequence
MDSNAFNDGFHDSEEIIASSGGLLVVCEICGSTVNRLEYERHLKTHKEKRVEICKICFKTFTNISNFKYHLAHHGTERPWLCNECPKNYKTKIDLLQHQRVHDKEKDPFRCDDCGMLFRTRSNFNTHKRTHNQVKGPQKCVLCDKMFVNLRSHIQMVHQKIRKFQCSICDKSFGKKSGLDRHTMTVHEKMRIWGCDLCSKNFGEKAQLLRHRKIHFKINTYEPDSEQGTEDKEIMDEKKRYQCGICKKTVNSRAALKRHKMLVHEKKRDFLCSQCPSAFGERSNLMRHIAKFHSTEQFVDKSGVDEEEARIDRNEIQSDNNEPFHCKFCSKVFGTKWGLQAHQDGCLLKQQMKANNRYDEDNSDDVSYEEEEEYSENELDYSSSAEDCSETHQEQNLSLMEQVFLPTEVSTEVLEIKQEPPFDDILSNPNFISNDDTESHELIDMKIKDEPREDEDLESDIKLEPFEMLDIKHEITDAAQGSPYEDSYCEEINLTTDQPQVTFAKRYKCKLCVNATFKEIRYFRSHYRTIHLKPKKLSCQYCSENFTYRAQRLRHVRLKHPETYEDTIDEPKDNKISDAECELCNRTLASQELLAQHMKAEHDDNGKAEDKSERTCSICQTIFKKIRYLILHLKAVHSEESYKCDRCFRSFSFKRSLDRHIKTIHEGIRDFKCEKNGCDKTFCNNYELQQHLIGNHDVGNKAHRTCKECFKVFKKAKYMEIHFAGVHSPQVYNCPVCNRAFSFRRSMERHVKAIHEDRRDYHCTEDGCDKSFRSRYDMNEHHNNIHAEIKKKQPLDKVTCEICDKVCSSRKVLYSHRKLVHEKVRWGINFQCKLCKEVFETKYKKTKHWSQVHRNGEIKLRKCYQCNSDFQLYVDFKKHIETNHFGCFICMICGHSLEDESALFIHNETHRKIEEDLRQFQCDKCSHRLSTKAQLQAHMRKHFSGDHYMCDICGKTYRFIAPFLYHKLVHENKFDFECRYCEKKFRMKRDRMLHERTHTGERPYKCHICLKTFSLKPNLTGHLLTHQAKIYMCKTCNSQYASAAKLRQHEDETHPELRPLFCINCRKTFKMQHSLDAHNRKCSRISFEFESTQKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-