Paka010110.1
Basic Information
- Insect
- Propsilocerus akamusi
- Gene Symbol
- bab1
- Assembly
- GCA_018397935.1
- Location
- CM031469.1:15100969-15103381[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-12 5.4e-09 35.3 0.0 3 43 480 520 478 522 0.90 2 2 0.42 6.2e+02 -0.1 0.4 4 19 618 632 617 633 0.90
Sequence Information
- Coding Sequence
- ATGGGCAGTGGAAGCGAAATGAACAATGGTGGTAGCAAAAGCGGCAGTGGCACCGGTGTATGGTCATCCGATGGACATGGCTACTGTTTACGTTGGAACAATCACAAATCGAATTTAGTTGAAATCTTGGAAGCTCTTATAAAAATGGAATGTTATGTTGATTGCACAATTCATGTTGATAACCACGTACAGTTCAAAGCACATCGAGTGGTTCTTGCCGCTTGTTCGCCATATTTTCAAGCCATTTTACAAGATGCACCGCAGGATCATTGTAGCATAATTTTTCCAGGCGTTCAAGAATTTGAAATGAGAACATTACTGGAATATATTTATGCTGGGGAGGTGAACATTGCTGAATCACAAATACCGCGAATAATGAAAATTGCCAAAATGTTGGAAGTCAAAGGACTTCTTGATATGGTCGATTTAACGAGTAATTTAAGTCAACAGCCACCAATTACAAGTCCATCAAACAATAGCGGTCTTTTTAGACCCGAATCAAATGTGCCGAGTGGAATGGAAGGAAAAGGACGTGAACAGAGTACTTTTGTTAATCCATTAAATCATTCGTCACCAATTATCTCAACCTCAACAAAGATCTCATCAGCACAAAGCTCATCATCACCACCTTACTCTTATAAGTCGCCATATGTTGCTAGTATCTATTCGCAAAGTCCTGCTGGCTCAAGAGAATTAATTGCGGGACCACCATCAAGACAAGACATTTCAGAAGAACGCAACAGTGGTCGTCAATGGCCACCATCAGCTCCATTGCCACTCTCACAGTCTGCTCAATCTATGCTCAGTTCAGTTTATGAGACGGGCTCCGATATGAATCCGTTGAAACGTAAAAAACTCTCATCAATCAGCTCAATGCTTCTAACTCGCGACACACCAATTTTACGTAATGTTCTTGCTCAATCGAATGCAGCTGATTCATCACAAAGTGCATTGCCACTTAACGCTAATCCCAGTCCACCACGTGGCGGCTCAAATAACAATAGCAATGATAACATCGAAAACAATGACAGTAATAATAACGAAAATAACAACAATGCAAATAACTTTGGTGGACCGAATGCCATTGCGGGAAATGCTGGCGTGCTTAATGCAAATAATGGCTCAGTTTTTGTGAGTTTCTCAAGAAAAAGTGGAGATCGTAGTTATCATTCATCAAACGGAAGTGATCATTCTGATAAGAAGTACAAAGACGATGAACCATCATCGCCATTTACGGACAAGTCGTTTGACGATGAACCGATGGGCAGCGATCGAAGACCACGTGAATCGCCACCGGAATTTTTGGCCGATATGCGACTTCCAGCTTACCTACAACAACATCAACTTCAACAAGCTCAATACCATCAACATCATGGTCAAGGTAGTGGATCTGGTTCACAAAAACCGGAATGGAAGCGCTATAAGCAATATACAAGGAATGATATCATGTCGGCTATCGAATGTGTACGTAACGGAATGAGTGCATTGCAGGCGAGTCGTAAATTTGGAGTCCCATCAAGAACACTTTACGATAAAGTTAAAAAAATGGGAATCACTACAGGAACTCCCAGAAATCGATCATCAATGAAACGCGAAAGTGGCGGCGCTGGTCCAAGTTCAAGTAGCGCTGCATTTCCATATGGCTCGTTGAGTGGTGCCGCAGGTGCCTTTGGCCTTTATCCAAATCAAGACAATCAGCTGTCACAATCACAAGACTTTGATCCTGACCTTGAAGAATTGAAACATCACCATCGTTCGAATCCACATGCAGCACTGCTCGATCCAGTTTTTCTGCAAAAAGCCCTAGAGGCTCGTGGTGAAAATATGAGAACGGATGCATTACATGCTATGGCTTTAGCTGCTGCCGCACATGCTCAATTAAATGGAATGGGTCAAACGAGTCCACATGCTCATGGTTCACAAAGTCCATCGATGCTTTCAAAATATATCTCCAGTCGTCAGCATGAAGAAATGGAACGTGAACGCAGCCGAAATGGCGACCACACTTCTATTAAACGCGAACCAGTCGACGAACCGAGTGATGACGAAATGGACACAAGTGATAAGGTTGAAAATCTGTCCTTATCGAAGCGTGAATTGTCACCAACAGTGACTCCCCCACCAGCTCATTCACCACCATTTTTAACACCTAGCGAGTCACGCAGCGTTATTGTACCACCGATGAAATATGCATCACCACGTTCTGAGCCTTCTTCGACAACGCCGCCATGCATAAACGATCAGCCATTGGCACTTGATAAGAGTGAATTCAAGCAATCGAGTCTTAATGATCCATCTATAGTCATCGCACCAGCAACAACAGCCAGTTATGACGATTAA
- Protein Sequence
- MGSGSEMNNGGSKSGSGTGVWSSDGHGYCLRWNNHKSNLVEILEALIKMECYVDCTIHVDNHVQFKAHRVVLAACSPYFQAILQDAPQDHCSIIFPGVQEFEMRTLLEYIYAGEVNIAESQIPRIMKIAKMLEVKGLLDMVDLTSNLSQQPPITSPSNNSGLFRPESNVPSGMEGKGREQSTFVNPLNHSSPIISTSTKISSAQSSSSPPYSYKSPYVASIYSQSPAGSRELIAGPPSRQDISEERNSGRQWPPSAPLPLSQSAQSMLSSVYETGSDMNPLKRKKLSSISSMLLTRDTPILRNVLAQSNAADSSQSALPLNANPSPPRGGSNNNSNDNIENNDSNNNENNNNANNFGGPNAIAGNAGVLNANNGSVFVSFSRKSGDRSYHSSNGSDHSDKKYKDDEPSSPFTDKSFDDEPMGSDRRPRESPPEFLADMRLPAYLQQHQLQQAQYHQHHGQGSGSGSQKPEWKRYKQYTRNDIMSAIECVRNGMSALQASRKFGVPSRTLYDKVKKMGITTGTPRNRSSMKRESGGAGPSSSSAAFPYGSLSGAAGAFGLYPNQDNQLSQSQDFDPDLEELKHHHRSNPHAALLDPVFLQKALEARGENMRTDALHAMALAAAAHAQLNGMGQTSPHAHGSQSPSMLSKYISSRQHEEMERERSRNGDHTSIKREPVDEPSDDEMDTSDKVENLSLSKRELSPTVTPPPAHSPPFLTPSESRSVIVPPMKYASPRSEPSSTTPPCINDQPLALDKSEFKQSSLNDPSIVIAPATTASYDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01257238;
- 90% Identity
- iTF_01257238;
- 80% Identity
- iTF_01257238;