Paka012413.1
Basic Information
- Insect
- Propsilocerus akamusi
- Gene Symbol
- -
- Assembly
- GCA_018397935.1
- Location
- CM031471.1:345312-346298[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-07 0.00033 20.0 0.0 22 37 191 206 188 210 0.88 2 2 9.1e-10 1.3e-06 27.7 0.0 4 36 227 258 225 263 0.92
Sequence Information
- Coding Sequence
- ATGTGGGAAAAGGAGACCTTATATAAACTGCAGCTGAAAAAGAATCTCGTTCACGAATATTGCAAAGACTCTTATCAGAATAGCAAAAATTTTGATACAGTTCTTCTGGCAAAAGATGGCGAACAGGTCTTCGCTCATCGTATAATTCTGGCAATTTCAAGTGCTCTTATAAAGTCTTTCACTGATCCCGTTGAGTCTATTTTGCTACCCGATTTTAATTCGGAGATTGTAAAAGCATTTGTTGAATTTATTTACACTGGTCAAACAGTTGTAAATTCTGAGAATCAAAGCGAATTTCTGGCAATATGCAAAGAGATGATGGTCGAAATTCCAAATATCGAAACTGTGTCGAAGCCGGAGAGTGAAAATGAGGAACACTTGGAAGAAGAGGAGGAGCTCATTCAGGAGAACAAGATAGAAAGCGTATACGTTGAAGAAAGCTCCATTACTGAAAATGAACAATCTCAACCAGGAATCGACACGTGTGTCAACGAAAATCTCGCTAAAAATGAAAATCGCGTCAATGCTGTTGCACAGCTAGTGATTGCTAATCACTTGCCAGTTCTAGATGCAGCTAGAGAATATAACATACCAAAATCAACTCTGCATAGACGTGTCACAAAGCTGAGAGATATAATGCCATCATCCTCTAAATCAAAGGATCTTGATCAAAAAAATAAACTGGAAACGGCAATAGAAGCTGTGAATCACGGTATGAACACAATGGCAGCGGCAAGAAAATTCGGTGTCCCCAAAACAACTCTATATCGATGGACACAAAAAATTAAAGGAAACGGATCTGACAAACAGTATAAAAGTCTGCGGAACCGACCTGGAAGTGAGTATAAAATGGAATCTTCAATCGACGTAACTATGATGGAACATTCAGATGATGACAAATTAGAAGAAACTGATGAATCTTAA
- Protein Sequence
- MWEKETLYKLQLKKNLVHEYCKDSYQNSKNFDTVLLAKDGEQVFAHRIILAISSALIKSFTDPVESILLPDFNSEIVKAFVEFIYTGQTVVNSENQSEFLAICKEMMVEIPNIETVSKPESENEEHLEEEEELIQENKIESVYVEESSITENEQSQPGIDTCVNENLAKNENRVNAVAQLVIANHLPVLDAAREYNIPKSTLHRRVTKLRDIMPSSSKSKDLDQKNKLETAIEAVNHGMNTMAAARKFGVPKTTLYRWTQKIKGNGSDKQYKSLRNRPGSEYKMESSIDVTMMEHSDDDKLEETDES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01257295;
- 90% Identity
- iTF_01257295;
- 80% Identity
- iTF_01257295;