Paka011082.1
Basic Information
- Insect
- Propsilocerus akamusi
- Gene Symbol
- lov
- Assembly
- GCA_018397935.1
- Location
- CM031469.1:21018529-21020852[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-18 2.8e-15 55.5 0.0 1 44 519 562 519 563 0.96
Sequence Information
- Coding Sequence
- ATGACATCACCATCACAGGAGAATTACAGTCTCCGTTGGTCGAATCACCAGTCACATATACTTGAAGCATTCGATGCCCTCCTTCAGCAGAATTCTCTTGTTGATGTGACGCTCGTGTGTGCTGATCGATCATTGCGTGCCCATAAAGTTGTTCTCAGTGCCTGTTCGCCATTCTTTGAGCGCGTTTTTAACGATACACCTTGCAAGCATCCAGTTATCGTTTTGAAAGACTTCCGCGGATGGCTCGTGCAGGCAATTGTTGATTTTATGTACCACGGCGAAATTGCAATACCGCAAGAACGTCTTAGTCAGTTAATACAAGCTGGTGAATCGCTACAAATTCGCGGACTTATTGGTGCTGTACCATATACAATTCCAAATTCGAATCCCTCAAAAGATCGTGAATCTCCACAAATTCAACGTGAAACTTGCGTGAGTCCAATGCCACGACGTAAACAAGCACGACCAAGACGGCGCTCAGGCGATCTTACTGATCTTCCACAAGATCTTACAAATGGAACTGTAATCACAAAATGTGAACAAGATGATTCACACACGGACACTGATGATGATGAAAAAATTCGTATCCTTCAAAATGGAACCGATGATGACGATAAAGTGCACAACGATGATAACAATAATGGACTTAATGAAGACGACGATGACGATGATGATGTGTCAAAGGACGGCGAAGAAAAAGAAAATCAACCTGATGGCGCAGAACAACCAAGTGAACCGGAAAACTTATGCACTAAGAAATCAAATGATTCACAACAATCGCCATCTGATGTACTCACGATTGGTGATAAAAATAATAATAATGATGGCAATGGATCTAAGAAGCGTCCAACAATTGGCGCGCCGCCAACACCAAGTGATTTTCATGAGCGATTCATTTTAAGCTTGAAAGACTTACGACATCTAAATAGATACCGACAGGGACCACCACCAGGTCATCCATTCAATGATATTCTATCGCATTTGCCCATTTCACCACCGCCCAGCTTTCAAATGCATCATGCCGATGCAAAAGATCAACACATGAAAATGGAAAGTGACCATTCCGATGCAGGAACGCCACCATTTCCAGAACAAATGGACTTGAGTCGTCATAGTAGTGCAGTTGAGCAATTTCAGAATGCAATGGATAAGCAAGTGAGAGAACATCAAAAAATGGAACGACACATAGAGCGACAAATGATGGAACGCTCAGGAATGCCGCCTGGTTTTCCACCACCATTTCAAGATGGACAAATGAGAGGACCTGGAAACAATTCTGGACATCATCCAGGCTCACCGCTATCATTCCCTTCAATGCCTTCGGTGTCGGCTTTGACACTTACACCACCACACATGTTTGGTCTGGATTCGCCACTAGGACTTTTTCCACCCGGAATGGATCCATCTAAAATGTACAATCCTTTAATGGACTTGCCTGAGCATCATCCAGCACATCATAGGTCAATTCATGATCATCCACCATTTTTGAAGAAGAAATTAAATCGACCAAAGGGACAACATAGTGCACCGCGAGGCGGGCCACCACGATCATGGACCAATGCTGAGCTTACAGAAGCTCTACAGCATGTATGGAATAAAAAAATGACAACGAGTCAAGCTTCAAGAATTTTTGGCATTCCATATAATTCATTGCTTATGTATGTGCGCGGTAAATATGGTAAAAGTTTAAAGCTCGAGCAGCTACGAAAAGATTGTATAAGTGGACCACCAATAGAGCTTTTACAAATGGGTCCAACGAGTCAGGCGAAAGAGAAAAAAGAGAAAAATCAACAACAAGATAATGAATCAGGTGAGCGAAGATCGGGTGGTCAAGACAGACATGGACACGAAGGACGTGATCATCAATCAGGTCAAAGAAGAAGTGCATCGAGTGAGCCCGATATGATGGTTAGTTCGAGTCCACTTTTCAATCCATTTCCGCCAGGATTTTATCCCGATTTTCCTGGTGCCAGTGGATTTCCCGGATTACAACTGAGCATGTTAAATCTCCTGCCGCCTGAAGCTCGTCTTCATCAGCCCATGATGCCGATGGTCATCGATGACGATTGTAAAAGTGACAATGGATCTATTCAGTCCCTCGAAGATTCACTGCCGGCGACGCCGATTAATTTGAATCGTGATCAAAATGGTGAAAGCAACGGACAGTCATCGTCAGCCGCTCGCCAACTATTTCAGAACTGA
- Protein Sequence
- MTSPSQENYSLRWSNHQSHILEAFDALLQQNSLVDVTLVCADRSLRAHKVVLSACSPFFERVFNDTPCKHPVIVLKDFRGWLVQAIVDFMYHGEIAIPQERLSQLIQAGESLQIRGLIGAVPYTIPNSNPSKDRESPQIQRETCVSPMPRRKQARPRRRSGDLTDLPQDLTNGTVITKCEQDDSHTDTDDDEKIRILQNGTDDDDKVHNDDNNNGLNEDDDDDDDVSKDGEEKENQPDGAEQPSEPENLCTKKSNDSQQSPSDVLTIGDKNNNNDGNGSKKRPTIGAPPTPSDFHERFILSLKDLRHLNRYRQGPPPGHPFNDILSHLPISPPPSFQMHHADAKDQHMKMESDHSDAGTPPFPEQMDLSRHSSAVEQFQNAMDKQVREHQKMERHIERQMMERSGMPPGFPPPFQDGQMRGPGNNSGHHPGSPLSFPSMPSVSALTLTPPHMFGLDSPLGLFPPGMDPSKMYNPLMDLPEHHPAHHRSIHDHPPFLKKKLNRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPIELLQMGPTSQAKEKKEKNQQQDNESGERRSGGQDRHGHEGRDHQSGQRRSASSEPDMMVSSSPLFNPFPPGFYPDFPGASGFPGLQLSMLNLLPPEARLHQPMMPMVIDDDCKSDNGSIQSLEDSLPATPINLNRDQNGESNGQSSSAARQLFQN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01257234;
- 90% Identity
- iTF_01257234;
- 80% Identity
- iTF_01257234;