Paka007156.1
Basic Information
- Insect
- Propsilocerus akamusi
- Gene Symbol
- retn
- Assembly
- GCA_018397935.1
- Location
- CM031468.1:23847102-23851920[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.9e-19 3.5e-16 59.1 0.0 17 89 43 113 31 113 0.92 2 3 8 1.5e+04 -4.0 0.1 11 30 150 161 142 168 0.48 3 3 2.2 4e+03 -2.0 0.0 7 38 210 241 204 254 0.66
Sequence Information
- Coding Sequence
- ATGAGTCGATTTGCTTGTTCGCGACATGTTGATACACCGAAAATGAAAATATCTAAAACACTGATCGATTTGCGTCTGATTGACGTTCCTTTTGTGCGTCATCAACTGTATCTTGTTACAGCGTTACGCACACCAATCAATCGTCTGCCAATCATGGCCAAATCGGTGTTGGATCTCTATGAGCTATACAATCTGGTGATAGCACGTGGCGGCTTAGTGGATGTGATCAATAAGAAATTGTGGCAAGAAATCATTAAAGGGCTTCATCTTCCATCGTCCATCACAAGCGCTGCTTTTACATTGCGCACGCAGTACATGAAATATTTGTATCCATTTGAATGTGAAAAGAAACATTTGAGTACACCAGCTGAGCTGCAAGCAGCGATCGATGGTAATCGACGTGAAGGACGTCGCACAAGTTATGGACAATTTGAATCACAAATGCAAAATCAAATGCAAATGCCACAAATGCAACGATCACCGATTCCCAATAATCTTCAACAAATGTCACCATTATCACTCGTGACACACGGCAATCCACAAAATCCACATCACAGATTAATGGGTGCACCACCAATTGGACAATTGCCGAGTATAGTTCCCCATGATATTGAGCAACGAATGCTGGAATACATCAAATTATTCCAGGCACCAAAGGACATGAAACGTTCACAATCACCAGATGTATCACGTGAGGCTCTCAATGCATTTGAAATGTCACGAATGGCTTTGTGGAATATGTATAACACCACAACAAACACAAGTCCACCAAATCCCATCAACACTAGTCCACCAGACGTTCAACGTGAAGCCCTGAATCTAGCCGAATCACCATCACCCATACCACCACCGCAACGATCACCCATCGTATCCATCAAACGTGAACGTGATTCTCATGATGATCGCGAAAATCCACCAGCTAAACGAGGCTTAGTTCGAACAGCGAACGATCTAAATCGTAAAAGTTCCATCAACAATAATAATAATCATCACATCAGCAACAACAATTCACAAGTGACTCCAACAAAAGTGCCCGCAAAGTCCATTGAGCATTCCGTGTCGCCGGCCGTTGAAAATGGTGCATCACCATCAAATAGCCAACACAAGCAAAATGGTTTCGATGGTACAACAATTTTGAATGGAATGCAATTTAAGATTATCAGTAAAGAAAACTCATCTACGGGCGAACCGCAATTAGTTGTGAAGCTGGAAGTTAATGGAATATCCTTTGAAGGTGTTCTCTTTCCCAATTCAAGTTCATCACCTTCTTCATCAACAGCTTCCACCGAGCCAATGGTGTCACCGAATAAGAATCAAATCACATCTAATACGCTAAATGATGATCACAAAATGGCCCATCAACCCATTGTGTCCTCTTAA
- Protein Sequence
- MSRFACSRHVDTPKMKISKTLIDLRLIDVPFVRHQLYLVTALRTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPFECEKKHLSTPAELQAAIDGNRREGRRTSYGQFESQMQNQMQMPQMQRSPIPNNLQQMSPLSLVTHGNPQNPHHRLMGAPPIGQLPSIVPHDIEQRMLEYIKLFQAPKDMKRSQSPDVSREALNAFEMSRMALWNMYNTTTNTSPPNPINTSPPDVQREALNLAESPSPIPPPQRSPIVSIKRERDSHDDRENPPAKRGLVRTANDLNRKSSINNNNNHHISNNNSQVTPTKVPAKSIEHSVSPAVENGASPSNSQHKQNGFDGTTILNGMQFKIISKENSSTGEPQLVVKLEVNGISFEGVLFPNSSSSPSSSTASTEPMVSPNKNQITSNTLNDDHKMAHQPIVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -