Basic Information

Gene Symbol
Kdm5
Assembly
GCA_018397935.1
Location
CM031471.1:4001126-4007030[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.7e-25 1.8e-21 76.1 0.0 2 89 132 215 131 215 0.95

Sequence Information

Coding Sequence
ATGTCTCCCACACCACAAAACCAACAAACGAATAAGGTTCATTTAACCCCAAAGAAGGACTCTGACGGATACAAAAGCTATTATGACTTAACATCACCATCAAAAGACCCGTTAGACATGGATTCAGGCGGCTCTGCACATTATCAGATGGACAAGTGTGAGGAATTTGAATTTGAAGTGCCTGAGGAAGCACCAGTCTTTATTCCAACAGCTGAAGAGTTTAAGAATCCTCTGCTTTATATACAAAAAATTCGTCCTTTAGCAGAAAGGTTCGGCGTTTGTAAAATTAAGCCACCGCCGGATTGGCAACCGCCGTTTACACTCGATGTAGATAAGTTGCGTTTTACTCCGCGTGTCCAAAGGATCAATGAGCTGGAGGCAAAAACGCGCATCAAACTAAACTTCTTGGATCAAATCGCAAAGTTCTGGGAATTGCAAGGAAGTTCATTAAAAATTCCGATGGTGGAACGCAAGCAGCTGGATCTCTATTCGTTGCATCGACTGGTGCACGAGGAAGGTGGACTTGAGTTAGTTACAAAAGATCGAAAATGGTCGAAAATTGCTGGTCGCTTAAATTATCCAAATGGTAAAAATGTTGGAACCATCTTGAAAGGACATTACGAACGCGTTTTGTTCCCATATGACATCTACATGAGCGGAAAGATTGTCGATGGAGCTAATCTTGAAGCCGGTGAAGAGTCAGACGATTGTGATTACAAACCTCACTGTATTGTTTCGCGTCAGGCTGTGAAGCCAACAATCGAAACCACCGCACGCCGCTCAAAACGTTTTCAGAATTTGGATCCCGAGCCGGGTGAAATGAATCTGTCAAAGGACAAGAATGCTGAACTTCGTCGCTTGGCAATGGCAATGAATTCGCCATCCAAATCTACGCGTGCACCTTCAGTATCGCCGTACAAACAGCGACGCGACGTAAAAATGCAAGCTAACTACGAAGCCGATCCATTGGCCAAATATATTTGTCTCAATTGCAATCGTGGTGATGTGGAAGAAGCAATGCTACTGTGCGATGGATGTGATGACAGCTATCATACATTTTGTCTTATCCCACCGCTCAATGACATTCCGAGGGGTGATTGGAGATGCCCAAAATGCGTCTGCGAAGAAGTCAAAAAACCACCAGAAGCATTTGGATTTGAACAGGCTTCACGTGAATATACACTTCAGCAATTCGGGGAAATGGCAGATCAATTTAAGGCCGAATATTTCAATATGCCCGTGCATATGGTACCAACAGAACTGGTGGAAAAGGAATTTTGGCGCATTACATCATCCATAGATGAAGACGTAACAGTTGAATATGGAGCTGATTTACATACAATGGAGCACGGGTCAGGATTTCCGATGAAAAATTCTGTTTGCATGCTGGGCGATGACCAGCAGTATGCCGATTCCAACTGGAACTTGAACAATTTGCCCGTTATGGAAGAATCCATTCTGGCATACATCAATGCTGATATCAGCGGCATGAAAATTCCATGGATGTATGTTGGCATGTGCTTTGCAACATTCTGCTGGCACAATGAAGACCATTGGAGTTATTCCATTAATTATTTACATTGGGGCGAGCCAAAAACTTGGTACGGTGTGCCAGGAAGTGCAGCTGAAAAGCTCGAAGATACAATGAAACGTGCAGCACCGGAGCTTTTCCAGTCGCAACCGGATTTGCTTCATCAATTGGTGACTATCATGAATCCAAATATTTTGATGGCTGATGGCGTTCCCGTGTATCGAACGGATCAACATGCTGGTGAATTTGTTATCACTTTTCCACGAGCCTATCATGCTGGCTTTAATCAGGGCTATAATTTTGCTGAAGCAGTTAATTTCTGTCCTGCCGATTGGGTAAAATTAGGCAGAGAATGTGTGGACCATTATTCAATGTTGCGACGCTATTGTGTGTTCTCGCATGATGAGATTGTCTGCAAGATGGCATTAGAAGCCGATCGCTTGAATCTGGGTATTGCAACTGCTTGCTATCTTGACATGGTAGAAATGATTGATCAGGAAAAGAAAATGAGAAAATCACTGCTTGAATGGGGTGTCACAAAGGCACAACGAGAGGCATTTGAGCTTCTGCAGGATGACGAGCGCCAGTGTGATTTGTGTAAAACCACTTGTTTCCTGTCAGCTGTCTCATGCACATGTACACCGGCGCTCGCATGTTTGCGGCATTATTCAGAACTTTGCAAGTGTTTGCCGGAAAATCATACGTTAAAGTATCGTTACACATTGGACGAGTTGCCGTTGATGCTGAAGAAGCTAAAAATAAAAGCAGAGTCGTTTGAAGTGTGGCTAACAAAAGTTCGCAATATTTTGGATCCAGCAATATCGATAAAGGTATCGTTCGATGAACTTCAGGAACTGGCGATTGAAGCTAAGCAGAAAAAATTCCCGAAGAGTCCATTGCTCGAGCGTTTAAATTCGGCTGTGGTCGAAGCCGAAAAGTGCATTACTGTCATTCAGCAACTGGATATCAATAAGATTCGCACACGTAACTCAAATGATATTGCTTCACGCTATAAGATAACCTTGGAGGAATTGGATCTATTTGTGATGGAGCTTGATCATTTATGCTGTACAATTGATGATTTTGACACCGTCAAGGAGCTTCAACAAATGGGATACGATTTTATGCGAACTGTCAAGAGATTATTACACGACGAGTCAATTACCACTAACGATGCTAAAGAGTTGCATAAGACAATACAGGATGGTTCAACATTATGCATTGAATTGCCACAATTGGATCAGCTAAAGGCACGCTTGGAGCAAGTACAATGGTATCGAATGATTCGCGCATATCGCGATAAAACTGAACGCCATCAACTGGCAATGCTGAAAAAGCATCTTAATGAGGGTTTAAAAGTTCCACCGCATCATGTTATCGAGCGTGAATTGAATGACATTAAAGAAATGATCATCGAAATGGAAGCGTGGGAAGATCGAGCTCAGAAAATTTACGAATCATCACAGCCCATTCAACTTACTGACATTCAAGATCTACTTCGCTATGGCAAACAAATTAAAGGATTCCTGCCATCATTCTCCATTCTCAAGGAAGCGATGGATCGTGCAAAGGATATTTTAGAACAAATTGAAGCACTACAGTCAAATGAGAACTATCCATACTTGGATTCGCTCGAATTTATCATCAACAGTGCTAAAACATTACCGTTCCAACTGGAGCCCATTCAGAAAATGGAAAAACATGTCAATGAGGCCAATGCATGGAAAGAACGTGCGTGTCAAACGTTCCTCAAAAAGAATTCCAAGTATACGTTACTCGAAGCGCTTACACCGAAATACGAATCTGATCTGACATTTGCTGTTGTACCGTCGGCTCTCTCGTCGCCACCAACAACATATCGTGGGGGTAGCGATAATGATTGCGAATCAGGTTCACCTAGCTCAAATGCATCGTCGTCATCGACAATATCAGCCAACAGTTCAAACGGTTCAAGTGATGGTAGTTTTATGGAAGATCTCGGACCAGCCGTGGTTGTTGCCACTTTCAAAAAGGCTGAAAAGAATGAAATTTGTCGAATCTTAGAAGTGCGTCGCATCAACACCGAAAAGAATCCCGAACGTGATCAGTATTGTTTGTGCAAGGGTCGTTTTATGGGTTTCATGAATCATTGTCAATTGTGCAAAGATTGGTTCCATGCCTCATGTGTACCGCCGATGTCGAAAAGCTATGACACTAAACAAGAATCCATGGATCTACGAAGTAAATATTTGTGCCCAATCTGTATGCGAACCAAACGACCAAAGCTGGAAAACATATTATCACTCCTGCTGGCACTTCAACAGATTCCATTGCGAGTACCCGAAGGAGAAATTGTCCAATGCGTTGCTGAGCGTGCAATGCATTGGCAAGATCGTGTTCGTCAAGCATTGAAGCGTAAAGATATTGAAATGGCTCTGCTTGAATTTTCGGTTCAACAACAGAAGAAGCCAGAAAATACTGCTAAAGAAACATCAGCCAGTCAGGAACGTAAACAGAAACGAGCAAAATTGAAATCCGAACAAGATTCATCAACACAGTTGACGCCGAGCTCATCGGATGCTGGTTCCGATACAGGACATCTCAGTGATGATGGCGAGTTAACAGCACCTGAACATGCCTATTCGATGTGCGACAAAATGTTGGGCTCACCATCATCAATGCCATCGATACAACTGAGCAAGCCCACTCAACAATTCCTCGAGGAACTCATGATGGAAGGTGATTTGCTGGAAGTGACACTTGATGAAACTATTTATCTGTGGCGTCTTCTGAATGCATCCAAAAATTACAGTAACGAATTGGAAGTGATTCGCAAGAAGTACAACATACCGATTGAAATGCCAGCAAGAATTTACAGCGAAGACAATATTAAGAAGCGCAAAATTCTATCGGGCGATGAAAAACCAACACGAAAATATACAAAAACCATCAAAGAGGAGCCGAAAGAAATTAAAACTGAACCAGTTGACTCTGATGGCGACATTGATGATGACGATGTAATGGACATTGAAGAGGCTGATGGTACATTACCCAAGAAGGGTAAACAAGGAGTTAAAGCGCAGAAACGTGTAGTTAAAACCAAACAGATCAAGAAAATAAAAGATGCAAGCGAAAAAGAAGGAAAAGATGGAAAACCGAAACCGAAAAGAAAGAAAAAAATGCCGGTTCCACCAACAACACCGACAGTAGACAATACATCACCAGCCAACACATCAAAAGTCACAACACCTGGCGAACCTTCGAAAATTGCTAAGAAAGTTCCAAAAATTAAAACTGAGAAAAAATCTAAGCCAAAAATCCCGAAACCCGCCAAAAAGCCAGAAAAAGATGACGCTAAGCCTATGAACGATTCAGATTCGGGCGATTCATCACCGGAAGAATCAGACGCGTATGAAACATGCGGCGTGCTTAATTGCATGCGTCCATCTGAATCTGTTCAAGATTGGATCCTTTGTGATGGTGGCTGCGAAATCTGGTATCACATGGTGTGCGTGGGCCTCAGAACGAAAGAAGTCAAACCCGATTTTGAATTTATCTGCAACAATTGCAAAAGTTCCGACACCAAATCATTACAAAAATAA
Protein Sequence
MSPTPQNQQTNKVHLTPKKDSDGYKSYYDLTSPSKDPLDMDSGGSAHYQMDKCEEFEFEVPEEAPVFIPTAEEFKNPLLYIQKIRPLAERFGVCKIKPPPDWQPPFTLDVDKLRFTPRVQRINELEAKTRIKLNFLDQIAKFWELQGSSLKIPMVERKQLDLYSLHRLVHEEGGLELVTKDRKWSKIAGRLNYPNGKNVGTILKGHYERVLFPYDIYMSGKIVDGANLEAGEESDDCDYKPHCIVSRQAVKPTIETTARRSKRFQNLDPEPGEMNLSKDKNAELRRLAMAMNSPSKSTRAPSVSPYKQRRDVKMQANYEADPLAKYICLNCNRGDVEEAMLLCDGCDDSYHTFCLIPPLNDIPRGDWRCPKCVCEEVKKPPEAFGFEQASREYTLQQFGEMADQFKAEYFNMPVHMVPTELVEKEFWRITSSIDEDVTVEYGADLHTMEHGSGFPMKNSVCMLGDDQQYADSNWNLNNLPVMEESILAYINADISGMKIPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSAAEKLEDTMKRAAPELFQSQPDLLHQLVTIMNPNILMADGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFCPADWVKLGRECVDHYSMLRRYCVFSHDEIVCKMALEADRLNLGIATACYLDMVEMIDQEKKMRKSLLEWGVTKAQREAFELLQDDERQCDLCKTTCFLSAVSCTCTPALACLRHYSELCKCLPENHTLKYRYTLDELPLMLKKLKIKAESFEVWLTKVRNILDPAISIKVSFDELQELAIEAKQKKFPKSPLLERLNSAVVEAEKCITVIQQLDINKIRTRNSNDIASRYKITLEELDLFVMELDHLCCTIDDFDTVKELQQMGYDFMRTVKRLLHDESITTNDAKELHKTIQDGSTLCIELPQLDQLKARLEQVQWYRMIRAYRDKTERHQLAMLKKHLNEGLKVPPHHVIERELNDIKEMIIEMEAWEDRAQKIYESSQPIQLTDIQDLLRYGKQIKGFLPSFSILKEAMDRAKDILEQIEALQSNENYPYLDSLEFIINSAKTLPFQLEPIQKMEKHVNEANAWKERACQTFLKKNSKYTLLEALTPKYESDLTFAVVPSALSSPPTTYRGGSDNDCESGSPSSNASSSSTISANSSNGSSDGSFMEDLGPAVVVATFKKAEKNEICRILEVRRINTEKNPERDQYCLCKGRFMGFMNHCQLCKDWFHASCVPPMSKSYDTKQESMDLRSKYLCPICMRTKRPKLENILSLLLALQQIPLRVPEGEIVQCVAERAMHWQDRVRQALKRKDIEMALLEFSVQQQKKPENTAKETSASQERKQKRAKLKSEQDSSTQLTPSSSDAGSDTGHLSDDGELTAPEHAYSMCDKMLGSPSSMPSIQLSKPTQQFLEELMMEGDLLEVTLDETIYLWRLLNASKNYSNELEVIRKKYNIPIEMPARIYSEDNIKKRKILSGDEKPTRKYTKTIKEEPKEIKTEPVDSDGDIDDDDVMDIEEADGTLPKKGKQGVKAQKRVVKTKQIKKIKDASEKEGKDGKPKPKRKKKMPVPPTTPTVDNTSPANTSKVTTPGEPSKIAKKVPKIKTEKKSKPKIPKPAKKPEKDDAKPMNDSDSGDSSPEESDAYETCGVLNCMRPSESVQDWILCDGGCEIWYHMVCVGLRTKEVKPDFEFICNNCKSSDTKSLQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01352394; iTF_00198874;
90% Identity
-
80% Identity
-