Basic Information

Insect: Proctacanthus coquilletti
Gene Symbol: L
Assembly: GCA_001932985.1
Location: MNCL01000022.1:753706-771476[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 4.2e-06 0.00052 20.9 1.7 1 23 166 188 166 188 0.98

2 18 0.33 41 5.4 5.7 1 23 194 216 194 216 0.98

3 18 6.3e-07 7.8e-05 23.4 2.9 1 23 222 244 222 244 0.99

4 18 1.5e-05 0.0019 19.1 0.2 1 23 250 272 250 272 0.98

5 18 1.5 1.8e+02 3.4 0.1 10 23 338 352 329 352 0.87

6 18 0.011 1.4 10.1 0.2 2 23 373 395 372 395 0.95

7 18 0.16 20 6.5 0.5 1 23 483 505 483 505 0.95

8 18 0.00022 0.027 15.5 0.9 1 23 513 535 513 535 0.97

9 18 0.0029 0.36 11.9 0.2 1 23 543 567 543 567 0.87

10 18 0.038 4.7 8.4 0.3 1 23 602 625 602 625 0.98

11 18 0.0011 0.14 13.3 2.9 1 23 657 679 657 680 0.96

12 18 4.7 5.8e+02 1.8 0.6 1 23 813 837 813 837 0.83

13 18 0.00079 0.098 13.7 4.6 2 23 846 868 845 868 0.96

14 18 0.092 11 7.2 0.1 1 23 874 896 874 896 0.92

15 18 0.56 70 4.7 0.3 2 23 904 925 903 925 0.95

16 18 1 1.3e+02 3.9 0.5 2 23 1009 1030 1009 1030 0.95

17 18 0.00075 0.093 13.8 0.0 1 23 1040 1062 1040 1062 0.98

18 18 0.1 13 7.0 0.3 1 23 1069 1091 1069 1091 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	4.2e-06	0.00052	20.9	1.7	1	23	166	188	166	188	0.98
2	18	0.33	41	5.4	5.7	1	23	194	216	194	216	0.98
3	18	6.3e-07	7.8e-05	23.4	2.9	1	23	222	244	222	244	0.99
4	18	1.5e-05	0.0019	19.1	0.2	1	23	250	272	250	272	0.98
5	18	1.5	1.8e+02	3.4	0.1	10	23	338	352	329	352	0.87
6	18	0.011	1.4	10.1	0.2	2	23	373	395	372	395	0.95
7	18	0.16	20	6.5	0.5	1	23	483	505	483	505	0.95
8	18	0.00022	0.027	15.5	0.9	1	23	513	535	513	535	0.97
9	18	0.0029	0.36	11.9	0.2	1	23	543	567	543	567	0.87
10	18	0.038	4.7	8.4	0.3	1	23	602	625	602	625	0.98
11	18	0.0011	0.14	13.3	2.9	1	23	657	679	657	680	0.96
12	18	4.7	5.8e+02	1.8	0.6	1	23	813	837	813	837	0.83
13	18	0.00079	0.098	13.7	4.6	2	23	846	868	845	868	0.96
14	18	0.092	11	7.2	0.1	1	23	874	896	874	896	0.92
15	18	0.56	70	4.7	0.3	2	23	904	925	903	925	0.95
16	18	1	1.3e+02	3.9	0.5	2	23	1009	1030	1009	1030	0.95
17	18	0.00075	0.093	13.8	0.0	1	23	1040	1062	1040	1062	0.98
18	18	0.1	13	7.0	0.3	1	23	1069	1091	1069	1091	0.96

Sequence Information

Coding Sequence: ATGGCCCTGAAGATGCTCTATCGGGGCCCTAGCTCTAGGCTAGAGACACTGATCGAGAAAATCCAGCAGAATAAAGAAGTTAATGGTGATTTGTACTCCACCCACACGTCGTCGAGCTATTCCCCATCGATGTCGGAGGGAGCTGCGACGCCGAACTCGCTGATAcaccaccatcatcatcatcatctccACCACCCATCGGAGGGCGATGGTAATCGCCTTAGAGGCAGTCACCGAAGACGGAGCACTTCAGGTGCAAATGGATGCGCTGATGGgaatgacgacgacgacgaggTCGACTCAGGTGACGACGAGCGAGTCGCGACCACGTCGCACGAGGCTACCGAAGACGGGATCGACGAGCTAAGCAACCTGGGCGATGGTGATGGTGACGGCGATGGGAAAGTGCCCGCGAAAATGCGAAAAATCGACAGGGACACGGCGAAATCGGAAAAGATGACAGGCGACGGCATTAAAACCACCTCGGATGGATCCTATCAGTGTCAGTTCTGTGATAAATCATTTCCACGTCTTGGCTACCTCAAGAAACATGAACAGaGTCACGCAGAGCATCTTCCCTTTAAGTGCGAGTACTGTGCTCGCCTCTTCAAGCACAAACGTTCTAGAGATCGTCATACAAAGCTCCACACTGGAGACCGTCGTTACCGTTGTCCCCATTGCGAGGCAGCCTTCTCAAGAAGTGATCACCTGAAAATCCACCTGAAGACGCATGACAACCAGAAGCCTTTCCAGTGCACTGTTTGCAACCGGGGCTACAACACCGCGGCCGCTCTCACCTCCCACATGCAGAACCACAAAAAACAGGCGGCTCTTTTGGGTGGCGGAGCACACGCCTTGAATTTTAGTCCACGTTCGACTGGCAGTGGTTCTAGCAATGGTAGCTTTCACAAGCGGCGGTATGCAACCGCGGACAACAGTCCGAACCGTGCCGATTTCCGTAAGCACGTGCGCGGCTCGTACATCTCGTGCATTTACTGCACCAAGTCCGATTTCGGTTCGCTGGACCAGCTGAACACGCATATCCAGACGATGCATGAGAACGTGGCACCGAAGGACACGCAGCACGCACTCGCAAACCATTCGGTGTTTCAACTGTCCTGCGAGTATTGCACCATGAAGTTCCCGAATATTCCGGCGATGTTCCAGCACATGCGTGCGACGCATATTGACCGTCTAGCGAGTCCCAACTCATACTTCGAGCACTTCAATCGCCTCGCTGCCTCAGGGACGTTTAGCCCTAGGCTAGCCACAAATGCACGGTTCGAGGAGATGAAGataaaaaccgAGGAGCCCAGCCCCAAACAGGAGCGACCCGCAGAAACAGAGAAGGATGAAGAGCAGGTGGGACCTACAGATCTAAGTCAACCGAAAAAGAGGTCTCAGACACCGTCGCAAGGATCTAATAACGCCGAAAAACCCGGCGTCTTCTTATGCAACCAATGCAACGCTGGTCTGCCCGACTTTGAAACCTTCCGGACCCACCTCAAGTCCCACATTAACCAAGGCGTCACGAACTTCGTCTGCCACCATTGTGGTCTGGCTTTACGTGATCAGGTCGAATATGAACGACACATCGTCTCACATTTCCTGATTTCTAGCTCAGAGTATGCATGCGCCACCAGTTGCAGCAAGGTTTTCCCCAAACCAGATGACCTCCAGAAACATTTGTTCGAGAGCCATGTCCAGGCCATGTTTAAGTGTTCCCTCTGTTCGGATCTCTTCGACTCAAAAGTGGCCATCCAGGTCCACTTTGCATGTGCTCATtcgaatgaaaataaaattttcaggtGCTCCGCATGCATGGAGTCCTTCCGGGCGGAAAAGGACTTCGCAGCACACATTAGGACCCGTCATGCTAGCACCGGATCTATCCAGTGTATGTTCTGTCGCGCAGTCTGCTCGTCTGAGCTTGAAATGCACTTCCATTTAGCTGCCCATGCCCGACAGTTTCGTTGCCCATCGTGTCCAGAGACCTTCCATGTAGAATTCCTGCTAGATCGTCACATGCAGACCCACCACGCTCAGAAGGATGGAACTGCAGGAACCCAAGTTTCGAACGCATCGAATCAATTGTTCCAAGGCCAATTCACTAAGACcccaaacaacaacaacaacattcTCGACTACCACGCCTTCGCGGCAAACAAGGGTCTTTTTCCTCTGCCTggcaacaaattttacaaccCACTTCAGGTGGAAACAAGCTCCTTAAATGCGTCCAGCAAACATCCAGCCCTCATGTATGGTCTAGGGCAGCGATACTTCGATACCAACAAGACTCTACTCGACATGTATAACTACCAGCAAGAAAAGGGCGGGTCTAACTACTTCGTCAGTCCCAGCAATTTCGACAGCACAAGAGGTCCAAAGTCACAGTCTGATGTTAAAACTCCCGATCGAACGCACAATAGTGGCTTCAGTTGTGGAATATGCGAACGCAGCGATTTTCGCACTGAGGCTGAGGTACACTCCCATCGCAAGATCGTCCACAATCTCAAGACGGGAGTCAGTCTTCGGTGCGCCTACTGCAGCGGAAACTTCAAATCCCGGAGCGAACTGGAGCATCATATGAAAACTTGCCACAACTCGACGGGGAAGCACAAGTGCTTGATCTGCGACGAAATCTTCCCGTCTCCCGCCATCCTCGCAGAGCACAAACTACAGCATTCGAAAGTCGGGCAATCTGGAAAATGCTCCCACTGCTCGGCGGCTCTAAATGATGTAGCCGCGTTCAAATCTCACCTGTCCGAGCATAACGTGGAGGGTCAGATTCCTGTACAGTGCATTTGCTGTCGGCAGACACTGAACTCGGATTTCGAGATAGGACTCCATGCTAAATTTCATACAAAATCCTCTGGAACACCTGAGAATCTATGTGCTCTCTGTCTAGAAGCAATCCCACCCACATCGGAGGCCCGCGTTTGCGAAAAGTGTTGCCGAAAACATAATTTGACCTCAAAATTCAATATGCGTTTCGAATCGTCTCGTACTTACGTGGAAAATAGATGCAATCTGTGTAAGATGATTCTACCTCACGCCCAACGACTCCAGGAGCACCTGATAGAACACACCTTCGTGGGATGCGAGGAGCGGGGCTATTCCTGTTACATTTGTTCAGCAGTCTTCACCGTTCCAGCTGGGTTGTTAAGCCACATGAATGAGCATGGTCCTAACGCACGTCCCTACGACTGCAACCTCTGCTCCGAAAAGTACTTCTTTAGAGCTGAGTTGGACAATCACCTGATCGAGCACGAGAACCGAGTCAAAACTGATCTCAAGCATGAGACTTCGACggaacagcagcaacaacagccaAAGGAAGCAACACCTTCAACACAATCGACGGTGACAACACATGAAAAGGATTCTCAGCAGACTGAATCGAAGAAGGAGGTTTCTGAAGAGCCACAGCATGAAGTCAAGACCGAAGTGACTGAGAACGACAAGGACGAGGATGAGGAGGAAGAAGAGGAATACATCgaagtagaaaaaattgcGGAAGCGTCTGCCCCTGAGGCGGATCAGAACCACCAAGAGGATTAG
Protein Sequence: MALKMLYRGPSSRLETLIEKIQQNKEVNGDLYSTHTSSSYSPSMSEGAATPNSLIHHHHHHHLHHPSEGDGNRLRGSHRRRSTSGANGCADGNDDDDEVDSGDDERVATTSHEATEDGIDELSNLGDGDGDGDGKVPAKMRKIDRDTAKSEKMTGDGIKTTSDGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCEYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHLKTHDNQKPFQCTVCNRGYNTAAALTSHMQNHKKQAALLGGGAHALNFSPRSTGSGSSNGSFHKRRYATADNSPNRADFRKHVRGSYISCIYCTKSDFGSLDQLNTHIQTMHENVAPKDTQHALANHSVFQLSCEYCTMKFPNIPAMFQHMRATHIDRLASPNSYFEHFNRLAASGTFSPRLATNARFEEMKIKTEEPSPKQERPAETEKDEEQVGPTDLSQPKKRSQTPSQGSNNAEKPGVFLCNQCNAGLPDFETFRTHLKSHINQGVTNFVCHHCGLALRDQVEYERHIVSHFLISSSEYACATSCSKVFPKPDDLQKHLFESHVQAMFKCSLCSDLFDSKVAIQVHFACAHSNENKIFRCSACMESFRAEKDFAAHIRTRHASTGSIQCMFCRAVCSSELEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQTHHAQKDGTAGTQVSNASNQLFQGQFTKTPNNNNNILDYHAFAANKGLFPLPGNKFYNPLQVETSSLNASSKHPALMYGLGQRYFDTNKTLLDMYNYQQEKGGSNYFVSPSNFDSTRGPKSQSDVKTPDRTHNSGFSCGICERSDFRTEAEVHSHRKIVHNLKTGVSLRCAYCSGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCSHCSAALNDVAAFKSHLSEHNVEGQIPVQCICCRQTLNSDFEIGLHAKFHTKSSGTPENLCALCLEAIPPTSEARVCEKCCRKHNLTSKFNMRFESSRTYVENRCNLCKMILPHAQRLQEHLIEHTFVGCEERGYSCYICSAVFTVPAGLLSHMNEHGPNARPYDCNLCSEKYFFRAELDNHLIEHENRVKTDLKHETSTEQQQQQPKEATPSTQSTVTTHEKDSQQTESKKEVSEEPQHEVKTEVTENDKDEDEEEEEEYIEVEKIAEASAPEADQNHQED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00628637;
90% Identity: iTF_00718036;
80% Identity: -