Basic Information

Insect: Proctacanthus coquilletti
Gene Symbol: salm
Assembly: GCA_001932985.1
Location: MNCL01000013.1:1666202-1677792[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 9.9e-07 0.00012 22.8 1.0 1 23 405 427 405 427 0.98

2 9 2.8e-06 0.00035 21.4 1.6 1 23 433 455 433 455 0.98

3 9 1.2 1.5e+02 3.7 2.6 2 23 677 698 677 698 0.95

4 9 1.1e-06 0.00013 22.7 0.5 1 23 704 726 704 726 0.98

5 9 1.8e-06 0.00022 22.0 1.8 1 23 736 758 736 758 0.99

6 9 0.0041 0.51 11.4 3.9 2 23 916 937 915 937 0.97

7 9 4.3e-08 5.3e-06 27.1 1.3 1 23 943 965 943 965 0.99

8 9 2.6e-06 0.00032 21.5 2.3 3 23 1136 1156 1134 1156 0.96

9 9 1.6e-07 2e-05 25.3 0.8 1 23 1162 1184 1162 1184 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	9.9e-07	0.00012	22.8	1.0	1	23	405	427	405	427	0.98
2	9	2.8e-06	0.00035	21.4	1.6	1	23	433	455	433	455	0.98
3	9	1.2	1.5e+02	3.7	2.6	2	23	677	698	677	698	0.95
4	9	1.1e-06	0.00013	22.7	0.5	1	23	704	726	704	726	0.98
5	9	1.8e-06	0.00022	22.0	1.8	1	23	736	758	736	758	0.99
6	9	0.0041	0.51	11.4	3.9	2	23	916	937	915	937	0.97
7	9	4.3e-08	5.3e-06	27.1	1.3	1	23	943	965	943	965	0.99
8	9	2.6e-06	0.00032	21.5	2.3	3	23	1136	1156	1134	1156	0.96
9	9	1.6e-07	2e-05	25.3	0.8	1	23	1162	1184	1162	1184	0.98

Sequence Information

Coding Sequence: ATGAAGAAAGTAAGAAGTACCTTGGTTCAAATCCAATTTAAGCATCGCCTGCATAACGATAATTGTACAGTCATATTCGAGAGGTGTTCAGAAATTTACAACCAGCTTTTAGAATTGCATGTCCCACAAAACGATCGGACAAACGCACCAAAACATTGTCGATCCATGCAAAAAACCGGGAAGAAGGGGAAGCAAACTAACCGATATCGGATAGGCTGTCTGTGCCGACGATCCCACTCGGGACGACTCTGGACATGGGAACTAAAGACTCAAAATGGCGACTCTGGCGATTCATCATCCGAGAGTGGCATAATGTGTTCTGAGGAACGtgataaaattgattcaaattcAAGTACCGATGATGAGGACCGTGATACAACTAATAGATCAAAACTATACTTTTCCCAGAAACAGAGACTTggggattttttttcaagagaACATAGTCTTGCTgacaaaaacaataacagcGGAAACAGGCGAGAGCGCGCTAATTCAGAAAACGATGTTGCACTAGACCTTTCGAAAGCCCCACTATACCCCGTCTCTTCCAGCCATGTAACCTTAGAGGCCTTGCAAAATACCAAGGTGGCGGTTGCCCAGTTTGCCGCAACTGCTATGGCAAATAGCCACAACTATGATGAAGCTATCAAAGATCTAGCCGTTGTACAGTCGACACTGTACAACTTGCAGCATCAACAATTGCTGCAGATTCAACTCATTAAACACTTGCAATTACAATTGAACAACAAAGATGAAAGAAAAAGTAGTGGGGATGAAGAGGACAAAGTGGATAACTTCGAGCCTACAGAGAAAACAGAatgtaatgttaataaaagcgACAATGAGGTAAAAGGGGAGGTTATTGGGGGAGATAAGGAATATCTTGCAGATTCCACAAAAATTGAAGGGactgaaaaggaaaaggagTTTAAGATATATGATGTTGCAAAAGACAAGCCCATTGATCATTCGCTACAATCACCTCTCTGTAATATAAATACTTCCTTAGCTTCAAGTATAATCACGAACCACGATCCCCCGCCTCCTCCTGATGAACCGAATTCCTTGGAAATGCTTCAAAAACGAACCCAAGAGGTTCTCGATTCCGCATCCCAAAGTCTCCTTGCTAATAATTTTGCAGACGATTTTGTCTTTGGGAAGGACAGGACTGGCCAAGATGGGAAAGGAAGAAACGAGCCATTTTTCAAACATAGGTGCAAATATTGCGGGAAGGTTTTCGGATCCGATTCAGCCTTGCAAATTCACATAAGGTCTCACACTGGTGAACGACCTTTCAAGTGCGATGTATGTGGAAGTAAATTTACAACTAAAGGCAATCTCAAGGTGCACTACCAAAGGCATACCCAAAAGTACCCTAATGTCCCCCCGGTGGGGCCCAGTTGTATCCctgatttttctcaaaacaaatttaatcctCGATTTGCCCCTCCCATCCAGAACTTCCCTGTCCAAGCAAACCCTAACCCTAAGGCCCTAGGCCTTCCCTTTCCACCAGGAGCTCCTTTTCCCGGTATGCCGGCATTACGTTCACCTATGGATATTCTGAGGACTCAGGCAATGCATCcgagcaattttttaaaatcctctgTATTAAGCGCCGACCAAGAAGAGCCTGCTGATCTTAGTAAATCTTTCAAGATGGAAGAGGAAGACACTAAGCCTAAACAAGAAGACGAACTCGTTTTATatacgaagaaaaataatcctgctgatgtaaaaattgaaaaagagcCACAATGTTCATCTGATAGTGAGGATAGCGAGCGAGACCTTCCGGAAAGCCGTTCGAAGGCATCTCATAGATCCTCTGTTAGTCGAAATTCGAGCATATCAGAAACCCTACCTGAAAACAATCAGAATCCGCCTCCGGTGGCCGCATTGCAAGTCCTTCCCTCCCATGTTGACACTAgttgggaaaatttaattgagatCGACAAAGTTTCTGAAACCTCTAAGCTACAAGAGCTAGTCGACAGCATTGAGAACAAGGTTACCGAACCGAATCAGTGCGTCTTTTGCCAAAGAGTCATGTCTTGCCGAAGTGCCCTTCAAATGCACCTTCGCACGCACACCGGTGAGCGACCTTTCCGTTGCAAACTTTGCAATCGAGCCTTCGCCACCAAGGGCAATCTTAAAGCTCACCTGAGTATTCACAAAATCAAACCGCCCATAAGGAGCCAGTTCAAGTGTCCTGTATGCCACCAAAGATTCTCTAACGCAACGGCTCTCCAGCAACATGTAAAAACACATGCTGCTGAAGGTAGTGATGCCGCAAAGCATCTTCAGTCCTTCGAAGGAGATGATTCACCGTATTCTGAGAATTTCGAGACAACCATCTCAGAAGTGTCTGGCCAGCGATCAGAGTCCTCCCAGGGCGATTATGACGACCACAAAGAGGAAGAATACGACGGGGATTATGGGAACAACACCAAAATTGAACCTGAGGACAATACCTCGTTTTCCATGAGAGAAGATGAAAGTAGTTcaacatcttttaaaatatcgtcCCATGGTGCTTTGGATCTGACGCCAAGAACAGGTCAACCTGGATCTCCGGGAGGACAGTCTCCGTGTTTTCCACATCTGTCGCTAATTTCGCAAGCTTCTGTAAATACGCCACCTCCCCCACTGATTCCCAGTACGCTTAGCTCTTTAACGCACTCAGTTCTCCCAAAGTCGCCGTTTAATCCTTTGGGACTTATCGGTTTGCGCGGAAATAGCACTTGCCACATTTGCTTTAAGACGTTCGCCTGCAATTCCGCATTAGAGATCCACTACCGCAGCCACACGAAGGAGCGACCCTTCAAGTGTTCCATCTGTGATAAGGCGTTCTCAACAAAGGGCAACATGAAGCAGCACATGTTGACACACAACAAACCGCGTGAGTGTaacaatcaaaattcaaacgcCTCCTCGGAAAGCGGCTCCTCCTGTCTTGGCCTCTGCTTACAGAAAACCGAGTCCCCAAAGGGTGAGCAAACAGACGTGGAGCAGAGCAGCCCGCCACCACTCctagcaacagcagcagctgTTATAGCGTCTTCGTCTTCATCGTCGTCTTTGTACCTAATCGGTTCGGACGACAACAACCCTGAAGAAGGCAACAAGGCGGGCGTGGGAGGAGGGAAGCGCACCTGGTCCGATTTGGAACAGCCCCCGGCCAAAAGGCAAATTGGTAATTCGCCACCTTCGGCTCTGACAACGGCCGGTCAGGACAGTCCCTCCGCACCCGGCCGGGAGTCAACCGAAAGCCAAACAACAATTCAATCGCAAACGCAAACGGCAGGGAAAGACACTCAGCCACAACGTGTTGAATCTCAgccatcatcatcgtcatcgaTTCACCTGGACCCACCTGTTGTTGTGAACACGAAACACCTGTGCTCCGTTTGTCGGAAGAACTTCAGCTCGAGCTCGGCGTTGCAGATTCATATGAGGACCCATACTGGGGACAAACCGTTCCGGTGCTCTGTCTGCCAGAAGGCCTTTACGACCAAAGGTAACCTTAAGGTGCATATGGGTACTCACATGTGGACAAATGGCTCCTCACGCCGGGGACGACGAATGTCTCTGGAGCTGCCAATGAACAGACCCCTGCCGCCTGTAGGATCCCATGAGGAGTTCCTGCAGCGACGCACGGAAATGTTCTACCCGTACATTCCCCCCTTTCTCAATGGGATGCAACAAAAGTTTAGTGAGATGAGTGCAATTCCTCCGAGTCCGCAAAGTGGATATCTAGGAATGGGACATCTCCCGAGCAAGTATTCAGGATTTCTTGGCTTCGGACAATTCTTGCCGCATCACAATCCTGCACTACATGGGATCAACTACCGCCAGTCCTTGACTCTACCGTCTTCAGGTGAAAAGCAGGACTGTCTAGATAAAAAACCGACTATCAGTGCTTACGAGCAATTGCACAAGGAGTTCGGGAGTCATCACAAGGACTTAGGACGCGGCTGGGATGATCAGTTTAGAAGTCAGCCGAATGATAGTGGTCTTGATGAACTCAAGCCAATGATGTCGCCAAGGTCTAACAGTCGCGAAGAAGCTTTAGTGATGTGA
Protein Sequence: MKKVRSTLVQIQFKHRLHNDNCTVIFERCSEIYNQLLELHVPQNDRTNAPKHCRSMQKTGKKGKQTNRYRIGCLCRRSHSGRLWTWELKTQNGDSGDSSSESGIMCSEERDKIDSNSSTDDEDRDTTNRSKLYFSQKQRLGDFFSREHSLADKNNNSGNRRERANSENDVALDLSKAPLYPVSSSHVTLEALQNTKVAVAQFAATAMANSHNYDEAIKDLAVVQSTLYNLQHQQLLQIQLIKHLQLQLNNKDERKSSGDEEDKVDNFEPTEKTECNVNKSDNEVKGEVIGGDKEYLADSTKIEGTEKEKEFKIYDVAKDKPIDHSLQSPLCNINTSLASSIITNHDPPPPPDEPNSLEMLQKRTQEVLDSASQSLLANNFADDFVFGKDRTGQDGKGRNEPFFKHRCKYCGKVFGSDSALQIHIRSHTGERPFKCDVCGSKFTTKGNLKVHYQRHTQKYPNVPPVGPSCIPDFSQNKFNPRFAPPIQNFPVQANPNPKALGLPFPPGAPFPGMPALRSPMDILRTQAMHPSNFLKSSVLSADQEEPADLSKSFKMEEEDTKPKQEDELVLYTKKNNPADVKIEKEPQCSSDSEDSERDLPESRSKASHRSSVSRNSSISETLPENNQNPPPVAALQVLPSHVDTSWENLIEIDKVSETSKLQELVDSIENKVTEPNQCVFCQRVMSCRSALQMHLRTHTGERPFRCKLCNRAFATKGNLKAHLSIHKIKPPIRSQFKCPVCHQRFSNATALQQHVKTHAAEGSDAAKHLQSFEGDDSPYSENFETTISEVSGQRSESSQGDYDDHKEEEYDGDYGNNTKIEPEDNTSFSMREDESSSTSFKISSHGALDLTPRTGQPGSPGGQSPCFPHLSLISQASVNTPPPPLIPSTLSSLTHSVLPKSPFNPLGLIGLRGNSTCHICFKTFACNSALEIHYRSHTKERPFKCSICDKAFSTKGNMKQHMLTHNKPRECNNQNSNASSESGSSCLGLCLQKTESPKGEQTDVEQSSPPPLLATAAAVIASSSSSSSLYLIGSDDNNPEEGNKAGVGGGKRTWSDLEQPPAKRQIGNSPPSALTTAGQDSPSAPGRESTESQTTIQSQTQTAGKDTQPQRVESQPSSSSSIHLDPPVVVNTKHLCSVCRKNFSSSSALQIHMRTHTGDKPFRCSVCQKAFTTKGNLKVHMGTHMWTNGSSRRGRRMSLELPMNRPLPPVGSHEEFLQRRTEMFYPYIPPFLNGMQQKFSEMSAIPPSPQSGYLGMGHLPSKYSGFLGFGQFLPHHNPALHGINYRQSLTLPSSGEKQDCLDKKPTISAYEQLHKEFGSHHKDLGRGWDDQFRSQPNDSGLDELKPMMSPRSNSREEALVM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -