Basic Information

Insect: Proctacanthus coquilletti
Gene Symbol: -
Assembly: GCA_001932985.1
Location: MNCL01000001.1:460238-464105[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.6 3.2e+02 2.6 0.6 3 18 65 80 63 80 0.86

2 14 0.00011 0.014 16.4 1.7 1 23 260 282 260 282 0.97

3 14 0.0003 0.037 15.0 0.9 1 23 288 311 288 311 0.95

4 14 0.073 9.1 7.5 1.7 1 23 316 338 316 338 0.97

5 14 9.3e-05 0.012 16.6 9.8 1 23 344 366 344 366 0.99

6 14 5e-05 0.0062 17.5 2.8 1 23 372 394 372 394 0.96

7 14 4.5e-06 0.00056 20.8 0.2 1 23 400 422 400 422 0.98

8 14 1.4e-08 1.7e-06 28.7 0.7 1 23 428 450 428 450 0.99

9 14 0.00056 0.07 14.2 4.1 1 23 456 479 456 479 0.95

10 14 3.5e-06 0.00044 21.1 1.5 1 23 511 533 511 533 0.98

11 14 7.2e-06 0.0009 20.1 1.6 1 23 539 562 539 562 0.95

12 14 2e-06 0.00024 21.9 1.0 1 23 568 590 568 590 0.98

13 14 6.6e-05 0.0082 17.1 3.6 1 23 596 618 596 618 0.98

14 14 0.0012 0.15 13.1 1.9 1 23 624 646 624 646 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.6	3.2e+02	2.6	0.6	3	18	65	80	63	80	0.86
2	14	0.00011	0.014	16.4	1.7	1	23	260	282	260	282	0.97
3	14	0.0003	0.037	15.0	0.9	1	23	288	311	288	311	0.95
4	14	0.073	9.1	7.5	1.7	1	23	316	338	316	338	0.97
5	14	9.3e-05	0.012	16.6	9.8	1	23	344	366	344	366	0.99
6	14	5e-05	0.0062	17.5	2.8	1	23	372	394	372	394	0.96
7	14	4.5e-06	0.00056	20.8	0.2	1	23	400	422	400	422	0.98
8	14	1.4e-08	1.7e-06	28.7	0.7	1	23	428	450	428	450	0.99
9	14	0.00056	0.07	14.2	4.1	1	23	456	479	456	479	0.95
10	14	3.5e-06	0.00044	21.1	1.5	1	23	511	533	511	533	0.98
11	14	7.2e-06	0.0009	20.1	1.6	1	23	539	562	539	562	0.95
12	14	2e-06	0.00024	21.9	1.0	1	23	568	590	568	590	0.98
13	14	6.6e-05	0.0082	17.1	3.6	1	23	596	618	596	618	0.98
14	14	0.0012	0.15	13.1	1.9	1	23	624	646	624	646	0.97

Sequence Information

Coding Sequence: ATGAAGCAGCTGACCGAAAATATAAGTTTGGAAAACGTCTGTCGGACATGTTCCCTCATAGTGGAGCTCGAGAAATTGGTCCCGCTGTTCAAAGCCAACCTTTCGGACAACAAATCGCCGATGTCCGTAATTGATGAGCTCGGCTTTGTACATTTAAAGATAGAAAAAGATGATGGGCTACCTCAGCAGATATGCACGGAATGTGTGCGACAGTTTACTAGCTTTACTACATTTAGGCGACAATGCGAGAGGAGTCAGTTAGTGTTACGTGCTTATTTCAATCCCAAAAGCTGTACGGATCAAGTTAGTGCGAATGAAGTGCTCTCACAAAGGTTGGAAATTGTTCCCATAGTTCAGGAATTTACAGACAGCGGGCTTAAACCTGAGGAAGATGACGAGCTCTCTCAAGATTTTGAAACTGATATTTGTCCACAAAAGGAAGAACAATTTGTTTCGAATAGCAATAGCCTAATTCATGACAATACTTCAAGTTTGAGGAATTGTTTCGTTGGTGATTCATCCCAAGAGACGGAGGATGCCTGCAAGAATCAGGAAGCTACAGATACATTTGAAGATTCCAATTATATGGAAGACTATGAAGTTTTTGCGAAAGAGGAAATCATTATTGTTTCAGACAATACTAGTTTAAGTCGAACTGAATTTTCCAAGGACACccctcttttaatttcaacagaAAATTCTCATGAAgGAACGCTACAAAAATCCCTTTCTGAGGAAGTGGAACTGAAACCTATGGAAAAAATGTCTTCCAAGCAGTTCGCATGCCCCATTTGCCATAGAACCTTTCAAAGTGTGTCGAATAGAAATACTCATATTCAATCTCACAATGAGGTGAACTCCTTCAAGTGCGACATTTGCAATCTGGGTTTCAAGAGCAAGGTTTATGTTAATAAGCACAAAAAAGCTGTCCATACAACAGGTGAATATGAATGTCCTATATGCCTTCGCCAGTTTCAGAATGGAGCAAAGTTCCATTACCATGTGAAGTCGCACAGTTCTATAAAGAAGTACCAGTGCAAGTTTTGCGACAAGTCTTTTATGCAGCATCACCACTTGACAAACCATGAACGAACTCATACTGGCCAGAGGCCATATCTTTGCAATATTTGTGGGAAGGATTTTAAACAGGATTGTAATTTCAAGTTGCATTTGCGCATTCACAGTGGGGTTAGGCCTTATGTATGCAACATTTGTGGGAAAGATTTTGCCCAGGGTGGTTCATTCACAATGCACATGCGACTTCATACTGGCGTACGACCATATCAGTGTGAGGTATGTggaaaaaactttattcaaaaatcgACTCTTACTGTCCATCTTCGGACTCATACTGGAGAAAAGCCGTACAAATGTGATCAGTGTGATCGTGCGTTTGTTCAAACCCACCAGTTGAAGTATCATAAGTACTCCACCCATAATGGACCTCCTTTGAACAAAAGGTCTCCTGGATCGGcggtagaaaataaaattgtaatcgaAAACGAACAGCCAAATTCCTCGACACCACCGTATAATTGCACTTTATGTTCGAAAACCTTTAAGCTACCATCCTCTCTAACTTCACATATAAAAAGCCACTCGGAAGAGCGTAAGCACGTGTGTAAGCAATGTGGGAATTCTTTTAAGCGAGCGGAGCACCTTCGGATCCACATAAACGGAGTGCACTTGAAGCGAAAGCCTTATGCGTGTGACTACTGCAACAAGACGTTTTCACAATCCGGCGACAGAAACATCCATATGAAGAGTCATACACAAGAAAAACCCTTCAAGTGTCTCCACTGTAAGAAAGGATTTAAGCTGCAAAAGTCCTTACGGGCACACGAACGAATTCACACCGGGGAGAAACCTTTTAGTTGCGAGATTTGCCACAAGGATTTTATGACTTATAACTCGCTCGCAGTGCACAACATGAAGCACTCCGAGGAGGAAAATGAGAAGCTTAAAGGGAAAACTTTGGAGGAAGTGAATAGGGTGCTCAACGAATTATCTGCCAGCAGCGTCGAGGTGCCGCCAAATGGTCAGGAAAAGGGAAATAGTCAACCTTCGGTTACTGCTTTACAGAGAATTGCTCTTCCAGTCGAGTTGGCGCGTCAAGACCATCCAGGAGGAAACGATAGTGGGCAGCCGAATGCAAATAGTCAAACTTCTGTGTTACCTTTACCTTCCCCAGATGTCTTAGAAGTGGACTAG
Protein Sequence: MKQLTENISLENVCRTCSLIVELEKLVPLFKANLSDNKSPMSVIDELGFVHLKIEKDDGLPQQICTECVRQFTSFTTFRRQCERSQLVLRAYFNPKSCTDQVSANEVLSQRLEIVPIVQEFTDSGLKPEEDDELSQDFETDICPQKEEQFVSNSNSLIHDNTSSLRNCFVGDSSQETEDACKNQEATDTFEDSNYMEDYEVFAKEEIIIVSDNTSLSRTEFSKDTPLLISTENSHEGTLQKSLSEEVELKPMEKMSSKQFACPICHRTFQSVSNRNTHIQSHNEVNSFKCDICNLGFKSKVYVNKHKKAVHTTGEYECPICLRQFQNGAKFHYHVKSHSSIKKYQCKFCDKSFMQHHHLTNHERTHTGQRPYLCNICGKDFKQDCNFKLHLRIHSGVRPYVCNICGKDFAQGGSFTMHMRLHTGVRPYQCEVCGKNFIQKSTLTVHLRTHTGEKPYKCDQCDRAFVQTHQLKYHKYSTHNGPPLNKRSPGSAVENKIVIENEQPNSSTPPYNCTLCSKTFKLPSSLTSHIKSHSEERKHVCKQCGNSFKRAEHLRIHINGVHLKRKPYACDYCNKTFSQSGDRNIHMKSHTQEKPFKCLHCKKGFKLQKSLRAHERIHTGEKPFSCEICHKDFMTYNSLAVHNMKHSEEENEKLKGKTLEEVNRVLNELSASSVEVPPNGQEKGNSQPSVTALQRIALPVELARQDHPGGNDSGQPNANSQTSVLPLPSPDVLEVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -