Basic Information

Insect: Proctacanthus coquilletti
Gene Symbol: ZNF236
Assembly: GCA_001932985.1
Location: MNCL01000080.1:393693-397343[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.043 5.3 8.2 0.2 1 21 113 133 113 136 0.90

2 20 0.00082 0.1 13.6 0.4 1 23 142 164 142 164 0.98

3 20 0.00056 0.07 14.2 0.1 2 23 170 191 170 191 0.97

4 20 0.0054 0.68 11.1 1.9 1 23 197 220 197 220 0.98

5 20 1.6e-05 0.002 19.0 0.2 1 23 247 269 247 269 0.94

6 20 3.1e-06 0.00038 21.3 1.6 1 23 275 297 275 297 0.96

7 20 4e-07 5e-05 24.1 0.6 1 23 303 326 303 326 0.97

8 20 0.027 3.3 8.9 3.8 1 23 336 359 336 359 0.92

9 20 0.0052 0.65 11.1 0.2 2 23 458 479 457 479 0.96

10 20 1.4e-06 0.00017 22.4 0.8 1 23 485 507 485 507 0.98

11 20 0.00015 0.018 16.0 3.0 1 23 518 540 518 540 0.98

12 20 7e-06 0.00086 20.2 0.7 1 23 546 568 546 568 0.97

13 20 0.00043 0.054 14.5 6.3 1 23 604 626 604 626 0.97

14 20 0.0019 0.24 12.5 5.0 1 23 632 654 632 654 0.96

15 20 0.00014 0.017 16.1 3.1 3 23 662 682 661 682 0.96

16 20 0.00016 0.02 15.9 4.4 1 23 688 710 688 710 0.96

17 20 1.2e-05 0.0014 19.5 0.8 1 23 935 957 935 957 0.97

18 20 0.00012 0.015 16.3 0.3 1 23 963 985 963 985 0.97

19 20 0.00019 0.024 15.6 0.6 1 23 992 1014 992 1014 0.98

20 20 0.00021 0.026 15.5 3.9 1 23 1020 1042 1020 1042 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.043	5.3	8.2	0.2	1	21	113	133	113	136	0.90
2	20	0.00082	0.1	13.6	0.4	1	23	142	164	142	164	0.98
3	20	0.00056	0.07	14.2	0.1	2	23	170	191	170	191	0.97
4	20	0.0054	0.68	11.1	1.9	1	23	197	220	197	220	0.98
5	20	1.6e-05	0.002	19.0	0.2	1	23	247	269	247	269	0.94
6	20	3.1e-06	0.00038	21.3	1.6	1	23	275	297	275	297	0.96
7	20	4e-07	5e-05	24.1	0.6	1	23	303	326	303	326	0.97
8	20	0.027	3.3	8.9	3.8	1	23	336	359	336	359	0.92
9	20	0.0052	0.65	11.1	0.2	2	23	458	479	457	479	0.96
10	20	1.4e-06	0.00017	22.4	0.8	1	23	485	507	485	507	0.98
11	20	0.00015	0.018	16.0	3.0	1	23	518	540	518	540	0.98
12	20	7e-06	0.00086	20.2	0.7	1	23	546	568	546	568	0.97
13	20	0.00043	0.054	14.5	6.3	1	23	604	626	604	626	0.97
14	20	0.0019	0.24	12.5	5.0	1	23	632	654	632	654	0.96
15	20	0.00014	0.017	16.1	3.1	3	23	662	682	661	682	0.96
16	20	0.00016	0.02	15.9	4.4	1	23	688	710	688	710	0.96
17	20	1.2e-05	0.0014	19.5	0.8	1	23	935	957	935	957	0.97
18	20	0.00012	0.015	16.3	0.3	1	23	963	985	963	985	0.97
19	20	0.00019	0.024	15.6	0.6	1	23	992	1014	992	1014	0.98
20	20	0.00021	0.026	15.5	3.9	1	23	1020	1042	1020	1042	0.98

Sequence Information

Coding Sequence: ATGAGTTCGAATGAGGCTTTCAGTGAAATTGGCGGCGAAATTATAGGAGCTTCATCAAGCTACACAAAATCCTTATTTACATTCAACGAGGCGGATACAGACTTCCTCACCACGAATGATTTCGTTGCCTTGGATCTAGATGGAGTAGTGGATTCATTTAAATCAGCAGTTGTAGGAAATTCTGATTTCATTAATGATGCCGAAGATGTTGGATCTCAATTTCAAGAACTGGGCTTGGGTAGCCCTAATCTGGGGGAAGTACCAGTACCAGATCACCCTGCTAAAgtgaagagaaaaagaaaaaaacgatcTGTGGAGAATTTAGAACCAAGAACATTTCCTTGTGATCTGTGTGACGATATCTTCACCATTTCTAGTGAGCTCAAGCAGCATAAAGACTTCATTCACGAGCTGACTAAGTTCTATCGATGTGAGCAGTGTTCCCAAGGTTTCAATTTTGAGAAGAACCTGCTTCTGCACATAGCATCACATAGTACTACTCCCGCGACTTGTCCAGAATGTGGCAGGGTATTTCAGAGGATCTCCAGCTTTGTAGGGCACCTAGAGAGCCATGCAGGAAGCGACAACTTCAAATGCCAGTCGTGCGACTTGGAATTCGAATTTGAAGCTTATTACCAAAGGCACCTGAAGAAGCAGCATAACGGTGGAGAGGTGATTGCTTCTCTGCTCATTCACAAGAGGAATTCTAGGAATATTGGAAATGGATACAATGGCAAGTATGCCTGTAAGACTTGTGGGAAAAGATTTCCAAAACCTAGTCTACTCCTTAGACATGAAATAGCTCATGCTAAAGTGAAGCCGTTCGTGTGTAATGAATGCAACAAAAGGTTTAGTCAAAAATCATCTCTAGATCGCCACAGCATGCTTCACAGTGGTATTAAACCTTACAATTGTCCTGAATGCAATATGAGCTTTTCCCAGCGCACTAATCTCATTACCCACATAAAAAGAGTGCATCCTGCTAAGAAGAGTGGCGAAGATATGTTCCCTTGTGATAGTTGCACTTGTGTTTTTAGCAAACTTAAAAGTCTCAATCGTCATAAGACGTTAAGGCACTCGGAAAATGCTAACTCGAATAAAGAATTATCTTTTACTGAAATCCTTGAGCATATCATGAGATTACACGAGGACACTGGCGCTCCATCAAGCAATGATTCCAACAAACAGGTCAATTTACCTGTTGCTGATGATCAGATAGTTCCCATGCAGTCAGTTAAAGACAATACAGCTCCGGAATGTACTGCACCGGATAAAGTGCAATATGTTAATGTTGTGGATTGCTTGTATCCGACAAACGAAAGGGTTAATCGAATGGTAAAAGAGATTTACATTAACGGAGTGAAGTGGCTTGAATGCCTTTACTGTCCTAGAAGATTTCAAATGCCTTTTGATATAGTTAGgcATTTGCGCATACACACCAGAGAAAAACCTTTCGAATGTGAATATTGCGGCCGAAAATTCGCACTGAAAAGTACTATGAAAATTCATATGCGCATTCACAAGAAAAAGGCGAATGAAATTACTAAGGTTTACCACTGCACGTATTGTCAGAAAACATTTGATTCACTTAGAAGTCTTGACTCGCATGTTCGtGTCCACAGCAATTACAAGCCCTACATTTGTCCAATATGCttcaaaactttcaaaagCAATAATAGTTTGCGGATACACAAAATTGTCCATGAACCGAAGAATCCAGAGGATGAAAGCATAAAGCGCCAGCTTCTACCACCTATTATTCAGAGTACTGAAGAAATAAAGCTGGTTGAGGATCAGAGTGTTCGAAGCCACCAGTGCTCTAAATGCGGTCTAAGATTCAAGAAGACGTCTCACCTTAAGCAGCATGAGTTGAGCCATCTGCGTCTGAAGAATTTTCAATGCAAAATATGTTTCAAgCATTTTTCTACAAAGAGCTCTCTAGGATTTCATCAGAAGATACATCTGGGGCACAAAACTGCTCCTTGCGAGGTGTGCTACAAGCAGTTCTGCCGCAACAGTGATTTAAAACGGCACAAAACGGTCCATAACAGCTGTCGCAATTTTATTTGCCCATACTGCAAAAAGGCATTTAAGAGAAAAAGCAGTTGCCAGAAGCATATAACACTACATGTGAAGGACGTAGTAACTGCAGAAGAAGCCGAAAAGGTGCCGCTGCTCTTGGCTAACGAAGGAAGTACCCATGGAGTAGAGGAAATTATGGAAACAAATATTAAGCAGCCGGAAGGGGTTGATGAGATTCTATTTAATGCCGTGAGTTATTCTATTCCTCAAACGGATCAGCCTGAAATGATCCAGACAATTCAAAACATTCAGAGCGATTCTACTGATGTTGCACCATGCAATGTGATCTTTTTGCTGGAGCCGAACACTACACCTTCTGTAGATGTAGACTCCTCCATGCAACAGAaggaaaatgttgtttttcttaGCTTGGGTAAAATACTAAATGAGGATCCGCTTGTACCTGCGGAATACATTAATTCACAAATGGTTAACCCACCCGTCGAAACTGAGATGGTCCCCATTTCGACTGCACCTTTAAATCCCCAGTCATCAAAGGCAGAATTTATTAGCATCAGCGATTTTCCAAATTACAGCAAcagtttatcaaaaaatatcgtTGTGGTGTCGCACGAAAAAAGCATTGATAATTCCAACGATTTACCTGCAACACTTTTAAACGAATCTGAATCACAAGGCGAGGAGTTTCTTATTCAGGAGGTGGGTGCTAAAATGGCTGAAAGGATTAGAAGCAAGAATTCTACAAAAACGAAAGCACCACACGCATGTCCAACGTgcagaaaagtttttcaaaaacccAGCGATGTAATTCGACACATTCGAACGCATACCAAGGAAAAGCCGTACCAATGTGCGATTTGTTCGAAGGCGTTCAGTCTTAAATCCACGTTGGacaatcataaaattattcatgagAAGGATAGACCAACATTTGAATGTCACGTATGTGGGAAGAGATATGCTGCAAAAAATGTACTCAATATTCATCTGCGGTTGCACACTGGAGAAAGACCATTCAAATGTGAAATCTGCTCGAAAACATTCCGGACATCAGGACACAAGATGTCCCATAATCGTGTTCATGCTAAGGCAAAATTGGAAGCTGCTAGGAGAAAGAAAAGGTCCTAA
Protein Sequence: MSSNEAFSEIGGEIIGASSSYTKSLFTFNEADTDFLTTNDFVALDLDGVVDSFKSAVVGNSDFINDAEDVGSQFQELGLGSPNLGEVPVPDHPAKVKRKRKKRSVENLEPRTFPCDLCDDIFTISSELKQHKDFIHELTKFYRCEQCSQGFNFEKNLLLHIASHSTTPATCPECGRVFQRISSFVGHLESHAGSDNFKCQSCDLEFEFEAYYQRHLKKQHNGGEVIASLLIHKRNSRNIGNGYNGKYACKTCGKRFPKPSLLLRHEIAHAKVKPFVCNECNKRFSQKSSLDRHSMLHSGIKPYNCPECNMSFSQRTNLITHIKRVHPAKKSGEDMFPCDSCTCVFSKLKSLNRHKTLRHSENANSNKELSFTEILEHIMRLHEDTGAPSSNDSNKQVNLPVADDQIVPMQSVKDNTAPECTAPDKVQYVNVVDCLYPTNERVNRMVKEIYINGVKWLECLYCPRRFQMPFDIVRHLRIHTREKPFECEYCGRKFALKSTMKIHMRIHKKKANEITKVYHCTYCQKTFDSLRSLDSHVRVHSNYKPYICPICFKTFKSNNSLRIHKIVHEPKNPEDESIKRQLLPPIIQSTEEIKLVEDQSVRSHQCSKCGLRFKKTSHLKQHELSHLRLKNFQCKICFKHFSTKSSLGFHQKIHLGHKTAPCEVCYKQFCRNSDLKRHKTVHNSCRNFICPYCKKAFKRKSSCQKHITLHVKDVVTAEEAEKVPLLLANEGSTHGVEEIMETNIKQPEGVDEILFNAVSYSIPQTDQPEMIQTIQNIQSDSTDVAPCNVIFLLEPNTTPSVDVDSSMQQKENVVFLSLGKILNEDPLVPAEYINSQMVNPPVETEMVPISTAPLNPQSSKAEFISISDFPNYSNSLSKNIVVVSHEKSIDNSNDLPATLLNESESQGEEFLIQEVGAKMAERIRSKNSTKTKAPHACPTCRKVFQKPSDVIRHIRTHTKEKPYQCAICSKAFSLKSTLDNHKIIHEKDRPTFECHVCGKRYAAKNVLNIHLRLHTGERPFKCEICSKTFRTSGHKMSHNRVHAKAKLEAARRKKRS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -