Basic Information

Gene Symbol
ct
Assembly
GCA_001932985.1
Location
MNCL01000206.1:145129-220138[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 6.2e-27 8.3e-23 80.8 0.0 3 71 540 609 538 615 0.94
2 3 5.2e-32 6.9e-28 97.0 0.0 3 77 965 1040 963 1042 0.96
3 3 7.5e-31 1e-26 93.3 0.0 3 76 1162 1236 1160 1239 0.96

Sequence Information

Coding Sequence
atggacGATGCAAGCAATATGATAACAGCTATGACAGCTGATATGAAGCTTGTAGAACAGATGCATCCCAACGAGCAGAAAGTGTTGAATAACAACAGTTCGagcaatattaataataataatcgatCGGTTACACCGAGTGATAAAGACGTCGAGTGTGCgagtaataacaataataataatagcactAGCAACAATAATAGTAGTTCGAAAACCCTAGCCGATGAATTAGCTGCCAAAGATAGAGAGATAAAAGCCCTAATCGATGAAGTAACACGATTACAAGCCCTCCACGAATCACACATCGTACAAATACAAAGACTTGAAGAGCGTTTAGAAGCGAAACGCCAGCATATACTAAGGCTAGAGGCACGCCTTGAAAAGCAAACAGATCTCCAGGATGCTAAGAAGGAAAATAAtaatttaagGTCACTGGATATGTCGAGTCCGGCTGTCGCTGCTGCAGCCGCAGCAGCCGCCGTAGCATCCGAGTCCAAGCAATTTCAGGAGCTTCTTTTCGAGCGGACCAAGGCGCTGGCCGCCGCGCAAAACGAGGCGCTCAATAAATCCAACTCGAATGCAGACgGAGCATCATGTGCAGCAACAACAGCCGCAACAGCAGTAGCACCTGCCGTAGTAGCAGCGTCCGCCACTACGAGCAATTCTCAAGCCCTTAGTAATGAAACCTCCGGGCCTACGACCACCATTGTTGGGGGTCAATCATCCCAAGTGGCCAGCAGCACCGCGGCGGTGTCGGTGAAGAGCGCCAGCGTGTCACCATCATCAGTCAGCAGTGATACGATAAAAAAGTTCCAAACAAATAATCCACGATCGGCCCGATCAGCCACAAGTACCCCGTTCCGGGAGAGTCCTAAAGACGGCGCCAGTGGCGGTTCACCACATCAACAACAATTGTTGACTggaaactttcaaaatgttgaacaATTCGGTTCATTTCTTGGTGAAGAAATTGTTAGTAATTGGCGTCGCGGCTACGAGCTGCCACCGCCACCGCCCCAATTGTTGCCTTCGATGGCAGCCGCAATAGCAACATCCACAGCAACAACGCCAATACCctttcaacaacaacaacaacaacaacaatcatCAACGAAACAACAGATAGCGCCACAGCCACCGACTGGGCCCTCAACCACAGCACTTTTAAGCCAATTAGTTAACTCGACATTTTCTAATTCTCTCAAAACAGATACGACACCGGTCGGCTCGTTGAACAACTCACATCAAGATGCCGACAAGGCGAGTAGCCACCACGAGACGTCATCGACGGCCAGTACCCCAAATCTTCAGGACGGGCGGTCAACAGACGAACACATGAACGGGACTAGCGGAGGCATGACGCCCATGTCCCTGTCGATGGTGAAAACAGAAGATAACAATAATACGTTGGGTCCTCTGCCACACGTCCCGACTGGATTCCTGCCCGGACTACCCTTTCAGTTTCAGGAGCGTGGTCACTTCCGGTTCGCTGAGGATTTGCAATTGCCGCCAGGTTCAATGGCTGGTCGCCTTGGGGAGTCTCTGATACCGAAGGGTGATCCCATGGAAGCAAAACTTCAGGAGATGTTGCGCTATAATATGGACAAGTATGCTAACCAAAATCTGGACACACTAACCATATCACGGCGCGTCCGGGAACTCCTGTCCGTGCACAATATTGGCCAACGACTATTCGCTAAATATATCCTGGGATTGTCACAAGGAACAGTCTCAGAACTACTTTCGAAACCAAAGCCATGGGATAAGTTGACGGAGAAAGGTCGGGATAGCTATCGGAAGATGCATGCCTGGGGATGTGATGATAATGCCGTCCTCCTGTTGAAATCATTGATACCGAAAAAAGTTAAAGACTCTGGTATGCCACAGTATGGTCGCAATGAAGACCCGATGAGTGAGGATCGCATTGCTCATATTTTGTCGGAAGCATCGAACCTTATGAAGACACCACAAAGCCAAGGAATGCATcatcagcaacagcagcaacaggcacaacagcaacaacagcaacagcataTGCAACAAGCTGCTCAGCAGCTTCAGAACAGCCAACATCAATCTTCAAGTATGCAAGAAGATACCCATAGTAATGAAGATTCGAAATCTCCACACAATCAATCCCCATCACCGTTCTATAAGGAGGCCTTGCAACGACGGTTGAAAGGGGATGAAATGTCGCAAGACAAAGTTGCCCGGATATATCAGGAGGAGCTGGCAAAGCTCATGTCCCGAACGCCCAGAGACGCCTTCCCAAGTGGTGGCATGCCACCGGccgcaacagcagcagcagccgccGCAGCAGCAAATCAAATGCCCGATGAAAATATTAGGATGGCTCTCGAGGCATACCATCGGGAATTGGCTAAGCTACAGCAGACTGGTGGAGCTCttccaaattttccaaatcttCCCGGACTGCTAGCCCTACAACAACAGGCTCTGAATGGAGCCCAGGATTTATCCGTGCCAAAGGAGAAATCTATGAAGGTGAATGGACAGCAGCAGAATACGTCCAGTAGTGGTGATCACAATGACCAAAATGCCAAAGACAATTCAGTAACTTCCAATGAAGACGCCCTACGCCATTCGAGCGCATTTAGTTTAGTCCGCCCGAAACAAGAGCCCGGAACCCCGGTGACTAGTAATGCTAGCACAAACTCAACGGCGACGGCTAGTCCTTTGGGTAATTCAATTCTTCCGCCTGCATTGACCCCCAATGACGACTTCTCCGCAGCTGCTAGTCCCCTGCAAAGGATGGCATCGATCACGAATTCTTTGATCACTCAGCCGCCCGTGACTCCTCACCACACGACCCCTCAGAGACCCATGAAGGCGGTGTTACCTCCAATCACTCAGCAACAGTTCGATATGTTCAACAATCTAAATACCGAGGAAATCGTTCGACGAGTAAAAGAGGCCCTATCACAGTACTCCATCAGTCAAAGGCTTTTCGGTGAATCAGTTCTTGGACTGTCTCAGGGTTCAGTTTCGGATCTTTTAGCCAGACCGAAACCTTGGCACATGCTAACCCAAAAGGGGCGGGAACCTTTCATCAGAATGAAGATGTTTTTAGAAGACGAAAATGCTGTCCACAAATTGGTAGCTAGCCAGTATAAGATAGCTCCTGAGAAGTTGATGCGTACCGGGAATTACAGCGGTAGTCCGCAAATCCCATCAGGTCTGAACAACAAGATGGTCCCCATGCAAAAAATGATGAATGACCTGAAGATGGAACCCCAGCATTTAATGCAAATGCAGGCTGCCGCTGCAATGAACCACATACCCACATCGCAGCATCAAGGTATGCTGTTGACGCCACCGGGACTTCCACCCCACCATGCCATTAACTTGCCttcaaatgaaaagaaacCGATGTTGATGCCGATGCACTCACCGCAACAGAACAATGCGATGAGAAACATGCACCACATGTCTCCTACTGTCTACGAAATGGCGGCACTGACCCACGATCTAGACACACAGGTGATAACGACGAAAATAAAGGAGGCTCTATTGGCCAATAACATTGGCCAGAAGATCTTCGGCGAAGCTGTGCTCGGTCTGTCGCAGGGTTCTGTTTCTGAACTCCTGTCGAAGCCGAAACCCTGGCATATGCTTAGTATTAAGGGGCGGGAACCTTTTATAAGGATGCAATTATGGCTGTCCGATGCTAACAACGTCGAAAGGCTTCAGGCTCTCAAGAATGAGCGACGAGAGGCCAGCAAGAGGAGGCGTTCAACAGGTCCTGGAACCCAAGACAACAGTTCTGACACTAGCAGCAATGACACCGCTGATTTCTATGCCAGCAGTCCTGGACCAGGATCAGTGGGCTCGGCAGGAGCCCCACCTAATAAGAAGCAGCGTGTACTATTCTCCGAAGAACAGAAGGAGGCACTGAGGCTGGCCTTCGCTTTGGATCCCTACCCTAACGTGGCGACAATTGAATTCCTCGCCAATGAATTGGGCTTGGCAACGAGAACGATAACGAACTGGTTTCACAACCATCGCATGCGGTTGAAACAGCAGGTTCCACATGGGGCTCCTAATGAGCCAGTGCCGAGTCGGGAGAACCAGTCAGGAACGCCTTTCGATCCCGTTCAGTTCAGAATTCTCCTCAATCAGAGGCTGATGGAGCTTCAGAAGGAGCGAATGGGTCTGAGCGGGGTTCCACTTCCGTATCCACCGTACTTTGCCGCTAATCCAAACCTCGCTGCTCTTATTGGGCGTGGCTTGCTGCCAACTGGTGAGCCAGATCTTGCAGCACTGAACAATGCATTTAAGGAGCAAATGAGTGGGCTGGACCTGTCCATGAGCTCGTTGAAACGGGAACGGGAGGAGGAATTCGAAGATGTCGACGGCGAGGGGGACAGCCATGTGTCGGATTCAGAGTCAGTAGACGGCGGTGATGTAAAACCCGAGCTTAAAGAGACCCCAACGTCCATTCCATCTGTATCAAGGATATCCCGGCGGAAGCCAGCCGCCCCACAATGGGTGAACCCGGATTGGCAGGATAACTTGAAGGGGGCTGCAGGGGGCACTCCGAGCGGACCGATCTCTGGAGCGGGGGGCAGTGATCAAGAGGTGATAATCAACGGGGTCTGTGTGATGCAGCAACAGGCCGCCGACTACAGCCGAAAGGCGGGTAGTGAAGAAACCGTCCGAATTGAGCCGGCTGCGGTCCAGGACCGATTCCAGGATGACGCCGACGACGATGTGACGTCAGATAATGAGGACGACGACGCCCGGGGGGACACCGAGTCCCAAATGTCCAATAAGCAGTCCGACTGTGGGGAGACGAACGAGCACGACGACAACGATGGTGACGGGGACGTCAGCGTGAAGCAGGAGGACTGCGAAAGTACCGGTCGAAGGAGTGTCCACGATATTTCCGACGGCGGTAAGGCGGACGACGATGGAACTCCCGGCGTCTGGAACTATTGA
Protein Sequence
MDDASNMITAMTADMKLVEQMHPNEQKVLNNNSSSNINNNNRSVTPSDKDVECASNNNNNNSTSNNNSSSKTLADELAAKDREIKALIDEVTRLQALHESHIVQIQRLEERLEAKRQHILRLEARLEKQTDLQDAKKENNNLRSLDMSSPAVAAAAAAAAVASESKQFQELLFERTKALAAAQNEALNKSNSNADGASCAATTAATAVAPAVVAASATTSNSQALSNETSGPTTTIVGGQSSQVASSTAAVSVKSASVSPSSVSSDTIKKFQTNNPRSARSATSTPFRESPKDGASGGSPHQQQLLTGNFQNVEQFGSFLGEEIVSNWRRGYELPPPPPQLLPSMAAAIATSTATTPIPFQQQQQQQQSSTKQQIAPQPPTGPSTTALLSQLVNSTFSNSLKTDTTPVGSLNNSHQDADKASSHHETSSTASTPNLQDGRSTDEHMNGTSGGMTPMSLSMVKTEDNNNTLGPLPHVPTGFLPGLPFQFQERGHFRFAEDLQLPPGSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQNLDTLTISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVLLLKSLIPKKVKDSGMPQYGRNEDPMSEDRIAHILSEASNLMKTPQSQGMHHQQQQQQAQQQQQQQHMQQAAQQLQNSQHQSSSMQEDTHSNEDSKSPHNQSPSPFYKEALQRRLKGDEMSQDKVARIYQEELAKLMSRTPRDAFPSGGMPPAATAAAAAAAANQMPDENIRMALEAYHRELAKLQQTGGALPNFPNLPGLLALQQQALNGAQDLSVPKEKSMKVNGQQQNTSSSGDHNDQNAKDNSVTSNEDALRHSSAFSLVRPKQEPGTPVTSNASTNSTATASPLGNSILPPALTPNDDFSAAASPLQRMASITNSLITQPPVTPHHTTPQRPMKAVLPPITQQQFDMFNNLNTEEIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGNYSGSPQIPSGLNNKMVPMQKMMNDLKMEPQHLMQMQAAAAMNHIPTSQHQGMLLTPPGLPPHHAINLPSNEKKPMLMPMHSPQQNNAMRNMHHMSPTVYEMAALTHDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQALKNERREASKRRRSTGPGTQDNSSDTSSNDTADFYASSPGPGSVGSAGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLANELGLATRTITNWFHNHRMRLKQQVPHGAPNEPVPSRENQSGTPFDPVQFRILLNQRLMELQKERMGLSGVPLPYPPYFAANPNLAALIGRGLLPTGEPDLAALNNAFKEQMSGLDLSMSSLKREREEEFEDVDGEGDSHVSDSESVDGGDVKPELKETPTSIPSVSRISRRKPAAPQWVNPDWQDNLKGAAGGTPSGPISGAGGSDQEVIINGVCVMQQQAADYSRKAGSEETVRIEPAAVQDRFQDDADDDVTSDNEDDDARGDTESQMSNKQSDCGETNEHDDNDGDGDVSVKQEDCESTGRRSVHDISDGGKADDDGTPGVWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00424534;
90% Identity
iTF_01256298;
80% Identity
iTF_01256298;