Pcoq002625.1
Basic Information
- Insect
- Proctacanthus coquilletti
- Gene Symbol
- Ebf1
- Assembly
- GCA_001932985.1
- Location
- MNCL01000075.1:707314-712771[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-36 1.7e-32 113.1 0.1 134 183 10 59 3 67 0.95 2 2 0.23 2.1e+03 -2.8 0.1 529 574 127 171 105 175 0.68
Sequence Information
- Coding Sequence
- ATGTTCGTAACactcttttttctatttcaggcCATAGTATACGAAGGACAGGACAAGAACCCGGAGATGTGCAGAGTGCTCTTGACGCATGAAATTATGTGCAGCCGATGTTGTGATAAGAAGAGCTGTGGAAACCGAAACGAAACCCCCTCGGATCCTGTCATCATCGATCGAGGCCCGCTTACATCTTGGCGGTTCTGGCGGAGGACGTTGGGCCGTCAAGGGAGGGTCGGCGGCGCCCAGCATCCTTTCTTGATCATTTACTTAAGAGGAACGAAAGggatgaaaaatgattttcatcatttgattgaaattgattCCGCGGCAATAGCGGTGAAAAACAGCATCGGCTCCTCCTTGGCAAGTTTCTTAATAAATGAAGCCAAGATGTTGCGGATGCATGCGAAACTGATACCGAAGATGGTCTTCAAGACGACTACCACCCCAGACTTGCGCCTCACTCAAGCCCTTTCTCCCAATAGTACTTCTACTCCGAGAGATTCCTTCAGGACTTATGCCTCGACGGACGACGGCGGGTGGAGGGTGGAGTTGAGACAGTTTCTTATTGACACGTGTCGGACGAATTATGGTAATTGCATTGCAGCATGCCATGCATCAGAACTTCGGCTAATTGAGTTGCAATTTGTTGCGTTCGCATGGCACAACGGCGGCTGCTGCGACATGTTCACGCTGCCGGCAGTGCGGTGGCGGTGGTCGTGA
- Protein Sequence
- MFVTLFFLFQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRGPLTSWRFWRRTLGRQGRVGGAQHPFLIIYLRGTKGMKNDFHHLIEIDSAAIAVKNSIGSSLASFLINEAKMLRMHAKLIPKMVFKTTTTPDLRLTQALSPNSTSTPRDSFRTYASTDDGGWRVELRQFLIDTCRTNYGNCIAACHASELRLIELQFVAFAWHNGGCCDMFTLPAVRWRWS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -