Basic Information

Gene Symbol
Arid4b
Assembly
GCA_001932985.1
Location
MNCL01000119.1:512463-519698[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2e-27 6.6e-24 84.7 0.1 1 88 294 379 294 380 0.95

Sequence Information

Coding Sequence
ATGCAGCAAGTGGACGATCCCCCATCATTATCAGTCGGAACGGAGGTAAGCGCTAAGTACAAGGGGGCTTTTTGTGAAGCTAAGGTACGAAAGGTGGTGCGGAATATCAAAGTGAAGGTTGCCTACAAACAGGGACTCGGCTTTGGAATTGTATCCGACGATGCCATCAAAGGTGTTCTCCGAGTCGGAGCTGCTGTCGAAGTCAAGCACCCGGACAAGCGAGAGTATGTGGAAGCCACGATTACGAAGATCCAGGACTGTTCCCAGTACACCGTTGTTTTCGACGACGGCGACATCACCACCTTAAGAAGAACGGCCCTCTGTCTTAAAAGCGGCAGGCATTTTAACGAGAGTGAAACTCTAGATCAGCTACCGTTGACCCACCCGGAGCACTTTGGCAATCCCGTAATTGGAGGACGTAGAGGAAGACGTTCGCGTCACCTCCAAGATGATAGTTCGGAAGATGAAGACGAGAACGACTCGAAAGAGGTGATTAACGAAAAAGAAGAACATATCGGAAAGGTAGTCTGCGTTGAATCAACGGAAACGAAGAAAAAGGACAAGGAAAAATGGTTCCCAGGCCTTGTAGTATCTCCAACGGCCCAAGTAACTGTGCGCATTCGAGTGAAAGATGAGTACTTAGTCCGCTCCTTCAAGGACGGTCGTTATTATACCGTCCCTAAGAAGGAAGCAACCGAATTCACTAGAGAGCTGGCGACCAAGCAGGATGGACCTGCCGTACAAGCAGCTCTAGAATACCTGGACAATGATATTCTACCACCCCATTGGGATCGAGATGCCCTATTCGGACTTACCAACAGCTCGAGCGAATATGAGGGTGAATTTGATTCGGATAGTTCTGATGATGAACCGCGTGAGGAAAAAGACCATTTCGTTGCGCAACTCTACAAGTATATGGACGATCGAGGTACTCCGCTAAATAAGGTGCCATCGATTGCTAACCGAGAGGTCGATTTCTACCGATTGTTTAGGACGGTTCAAAAGAAAGGTGGCTACAATCGAGTTACGTCTCAGAACCAGTGGAAGGCAATTACCATGCGGTTGGGATTTGATCCTGTAACCGTGAGTGTTACAAATCTGGTTAAACAAGCGTACAAGAAGTTCTTGCAACCGTTTGTGGAATTTGATCGAAAGTTGGGCTGTTCGATGTCAATGACACCGCGTAACGCAAACCGAAGTAAAGGCAGGAGTTTGGTTAGAGCCAACTCCGTTGCCTCACCTAAACCAGAAGTAAAGGAAACAAAGCCAGTAGCGCTAGTTGAAGAGTCTGAAAATACCAGTGAGTCCAGCATGGATGTAACCAAATCCAAGCGAAAGACGTCCACAAGTAGTGGCAAAGTAAAGACTTTGGTGGATAAATTCGAGGAAAAGTCTAAGGAAGAAAGTGAGACTCCTTCAAGCAAGTCCTCTAAGTCAATTGTGAAAGAGGAACAAATACCCATTCCTCCCACAAGTaaagaactaaatttaaatggtggaaaaaaagaaaagccgGGTAAGAAACAACCGCAGGTGGAACCGGACAAGCGTGGTCGCAAGAAGAAAGATTGCGAAACCAGCGAAAAGGTTTCGGAAGTGACTGGATCCGGTGATTTTCCAGTTGAGGTAGGCGATAAACTTAAGGTCTACTATCATGAGAAAAAAGTAACGTACGAAGCTAAAGTGATTGAGATTACGGTCCAGCAAGGAACTCCCCTATATCTTGTACATTATACTGGGTGGAATACACGTTACGATGAATGGGTACCTAGGGAGAGGATTGCAGAAAATTTGACTAGTAATAAAGGTAAGCGGTTGAAGACTTCATTAGGCAACCAAAAGGGAGCAAACACTACAACTCTAAATGAGGGTGTGAAACAATCTTCTGGCGAGAAGACTCCGACAGTAACTACACTGACGACGACCCCGGCAATTAATAAGGTGGCAACTGCTTCAAAAAGAGGTCGTGGCAGGAGCGATTCACAGCCGCCAAGATCAACAACACCTTCGTCGGGTGTTTCTAATTCAAGTCGCACAAAGTCGCCCGCCACACCTGCGGCGCACCGTCGCACAACAAGGACTCAACCCAATACGCCGCGACGCACCTCGAACAATGTCTCCGATATATCGATTCAGAGCGAGTCTGATACCGACTCTGATGAGCCAGTCAAAAAGCCAGCAAAGCCTGCGGTAAGCACGGCTACTACGACAGGGTCCCCTAGTCAGACTGTACCAACAAGTAAAGCGAATGCCCCTAAATTAGCCTCTGTTACCTCTGCTACCAACAGCCCCAGCGAAACGGAGGAGGAAGAAGTTTCGACAGGAGCCAAGGGTCGCGACTATGACCTAAACCAAATCAGGTCCGAATTGAAGGGCTTCAAAGAGTTGAAATCGCCTTCACCAGAATTGGAATCTCAAACAGCAGAGAAGAAGCCGGCGAATGTCTTTGATTTTAACATCATGGACGAGCCGGGAGCCAACAAGAGTGACCTGTCCAACATATCGAAGTTGTCCATTTCTGCAAACGAATCTAAATCGTCTTCAACAGATTTGTCTTCAGAAACAGATTCATTCGCAGACGATGACTCCCAGTCTTCAGATAAGACCACCACTTTGGAGAATATGACTGAGAAGCTACAGCAAAAGATAAAGGCTGAGAAATTGGCTCAAGCAAAATTAGAACGGATCAATGCCGGCAAAGTCGGTGAAAAGGTCTCACCTATCAAGTCTGCAGGTATCGAGAAAATAATCAACGATTCCTTGGCAGAAAAGGAGACAATGAAAGCAAAACCTTTTCTCATTGAGAAGAGCATTTacaaagtaaatgaaaaagagGATAAACCCAAAATTCCCATTGAGATTAAAcctcaaattataaaagccaTAACGACGCCTGAAAGAAAAGTCATACAAGGCATAGCATTGTCCGAAAAAATCCCAGTCCCAGCAATTGAAACAAGGTGCATTCCTTTGAGAGCAGATAGAAAACcgacaattttggaaaagccACAAACTTACTTGAAATTAGCACAAAAAGAGTCGCAACAGCAACAAGTTGAGATAGCATCCTCGAAAACCTCCACAGTAATAACAGAGGCTGGAAAGGAAATGGCCAAACCTTTCATCACCAAGTTGAATCCAACTCCCGACGTGTATGAATTTAAGGAACCAGAGCCATTCGAGTTTGAAGTACGAAAACCCCAACCCACAGCATTCGTCACTTCCGATCTCGACAAGAAAAAGAAGATTCCATTGAAGACCACTGATTCCACTCAAGATACAAAAGTGGCGCCAATTGCAATGCCCGTTgctaaaaagaacaaaaggtCGCCAACGAAGGACCCGGACAAAGCGAAGCAAATAAAACTAGAGGAGAAGTCAACGGCTTCCGAAGGTCCTTCTTCCAGCACGACATTAATGTCTCCAATTAAAACTGAGGCGACCTTTGACGCCTTGAGAAAATCGCCTAGCTTCAATCTAAACATAAACGCGTTGAATGAGGAGCTGGCTGCGACGGTTCAGGAGACGACAAAAGCCCTTACTGATATCCCAGAAAATTTGAGTCCTATCCTCCCGGCTCAACAGAAATCAATTCCCTTCATAAGTCCGTTCATTGAGACCAAGGCGGACATCTCCAGCATTTTTGATCTGAAGAAGGACGTCGAAAACATTAAGAGCGATAGCGATGACGAGAAGGCGACCGGTACGAAAACCGAATTAGAAACGGTTAAAAAGATCTTGCTGAGTGATGCCACCTTTGATTTAGAGCCTCCCAAAATCGACAAGCCGTCTTCAATAGCTGATAAAGTGTTGAAGGCCTTAAATCAGCAGAAACAGGAAGAAGAGAAGTTTAAGGAGGAGTCTGACGTTGTTTCCGCACCTCATAAATCACCTGCACCATCGGCCAGCAAACACTTGTTCATTGAGACGCAGGGCCCCGTTCCGAATTCATCCTTTGTAAATCCCGAACCGCCCAAGGTGCTTCCGTCGTTTGTTGCAGAGCCACCTAAAATAGAATTACCTGCGGTGATTAAGAAGGATATCGAAATTGTTGTAAAGAAGCCTATTTTAAGCAGCCCAGAGCACAAGCTCGATATTTTAGAATCGATAGCCCCTAAGAATAACGATCTAAGTGAAACTATACAGAAACTGGAAAGTGCAATTCAAAAGACGTCAAATGTGGACCATTTCGACGAGGACTCTTCCGATAGTACGGACTCGGAAAGACGTCTGGTCATAGAAGACGATTCGCAAAGTTCTGATAACAATCAGGCAGAAATCGCCAGTGAGGTGACCGTGACCAGCAGCGGAATGAAGAAAGTTGAACCTACAGatgataagaataattttaagcagGAATTGAAAGAGGAACCGCCTGTGTATCCCACAAAATATCCATCAATTTTCGGGCTGCAGTCCTCAGTGTACTCAGATGTAGCCCTGCTTTCAGACTCCGGTGTGAAGCCTATAGCTGACCTCATGTCGCCTGTTAAACCGGAAGCTGAAAACAAGCAAAAGCTGGATTTGATGATACCTGACAGTAACATTTTGTCCTGTCCTGGAATTAAAAAGGAGGATCTTCTATCCTGccaagaaaacataaatatgcATAATGAATCCATAAATCTCTTGCTTTGTGAGGAAACGATTCCAGGCAGTCCAACGCCGACCTCAAAAGAGAACGTAGACATTAAAGTAAATACGCATCCCATAGAATCCGATATTAAGCCCATTCCAATGGACATCGAGTGTGGCCCAATAACTTCGACAGTGGTCGACATGAATTCCTcaaagatttcgaaaatggaTAATCAAGGGCTAAGCAGTTCACCTCATGACTCTGCTAGCCAGGATGATAGCAGTGAAGATCTGAAGAAGCAACTTGAGCAAGGTCATGAGGCATCTCCCAAAAAGAAGCGTCGCACAAGGAAACACTCAGAGGGTGAAACCATGTCCAAGAGACGTAGAACGACGGTGGTGAAGAAGACCAATGgATCCGACAGCGATGAAAATTCTGATGCCAACATATCGCAGCGGTCATCGTCTTCTAGGTCATCTAGACCAAGTCAATACAATTTCCTGGTTCAATTGGaCCCAGCAATGAGCCCCAACCAGCGAATTGCTAtcctgaagaaaaaaatccaagAGTTAAGGAAAACCTACAATATGATTAAGGCCGAACTGGCGAGCATCGATAGAAGGCGCAAGAAATTGAGGCGTCGTGAACGTGAGAAGAAGAACCAACAGAAGTTGAGCAGTTAA
Protein Sequence
MQQVDDPPSLSVGTEVSAKYKGAFCEAKVRKVVRNIKVKVAYKQGLGFGIVSDDAIKGVLRVGAAVEVKHPDKREYVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVIGGRRGRRSRHLQDDSSEDEDENDSKEVINEKEEHIGKVVCVESTETKKKDKEKWFPGLVVSPTAQVTVRIRVKDEYLVRSFKDGRYYTVPKKEATEFTRELATKQDGPAVQAALEYLDNDILPPHWDRDALFGLTNSSSEYEGEFDSDSSDDEPREEKDHFVAQLYKYMDDRGTPLNKVPSIANREVDFYRLFRTVQKKGGYNRVTSQNQWKAITMRLGFDPVTVSVTNLVKQAYKKFLQPFVEFDRKLGCSMSMTPRNANRSKGRSLVRANSVASPKPEVKETKPVALVEESENTSESSMDVTKSKRKTSTSSGKVKTLVDKFEEKSKEESETPSSKSSKSIVKEEQIPIPPTSKELNLNGGKKEKPGKKQPQVEPDKRGRKKKDCETSEKVSEVTGSGDFPVEVGDKLKVYYHEKKVTYEAKVIEITVQQGTPLYLVHYTGWNTRYDEWVPRERIAENLTSNKGKRLKTSLGNQKGANTTTLNEGVKQSSGEKTPTVTTLTTTPAINKVATASKRGRGRSDSQPPRSTTPSSGVSNSSRTKSPATPAAHRRTTRTQPNTPRRTSNNVSDISIQSESDTDSDEPVKKPAKPAVSTATTTGSPSQTVPTSKANAPKLASVTSATNSPSETEEEEVSTGAKGRDYDLNQIRSELKGFKELKSPSPELESQTAEKKPANVFDFNIMDEPGANKSDLSNISKLSISANESKSSSTDLSSETDSFADDDSQSSDKTTTLENMTEKLQQKIKAEKLAQAKLERINAGKVGEKVSPIKSAGIEKIINDSLAEKETMKAKPFLIEKSIYKVNEKEDKPKIPIEIKPQIIKAITTPERKVIQGIALSEKIPVPAIETRCIPLRADRKPTILEKPQTYLKLAQKESQQQQVEIASSKTSTVITEAGKEMAKPFITKLNPTPDVYEFKEPEPFEFEVRKPQPTAFVTSDLDKKKKIPLKTTDSTQDTKVAPIAMPVAKKNKRSPTKDPDKAKQIKLEEKSTASEGPSSSTTLMSPIKTEATFDALRKSPSFNLNINALNEELAATVQETTKALTDIPENLSPILPAQQKSIPFISPFIETKADISSIFDLKKDVENIKSDSDDEKATGTKTELETVKKILLSDATFDLEPPKIDKPSSIADKVLKALNQQKQEEEKFKEESDVVSAPHKSPAPSASKHLFIETQGPVPNSSFVNPEPPKVLPSFVAEPPKIELPAVIKKDIEIVVKKPILSSPEHKLDILESIAPKNNDLSETIQKLESAIQKTSNVDHFDEDSSDSTDSERRLVIEDDSQSSDNNQAEIASEVTVTSSGMKKVEPTDDKNNFKQELKEEPPVYPTKYPSIFGLQSSVYSDVALLSDSGVKPIADLMSPVKPEAENKQKLDLMIPDSNILSCPGIKKEDLLSCQENINMHNESINLLLCEETIPGSPTPTSKENVDIKVNTHPIESDIKPIPMDIECGPITSTVVDMNSSKISKMDNQGLSSSPHDSASQDDSSEDLKKQLEQGHEASPKKKRRTRKHSEGETMSKRRRTTVVKKTNGSDSDENSDANISQRSSSSRSSRPSQYNFLVQLDPAMSPNQRIAILKKKIQELRKTYNMIKAELASIDRRRKKLRRREREKKNQQKLSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01049431;
90% Identity
-
80% Identity
-