Basic Information

Gene Symbol
stc
Assembly
GCA_963942575.1
Location
OZ012654.1:3294263-3298731[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 2 2.5e+04 -4.3 1.6 15 19 497 501 496 501 0.81
2 14 0.13 1.7e+03 -0.4 0.1 4 10 530 536 529 537 0.94
3 14 1.5e-06 0.018 15.5 12.3 4 19 547 562 545 562 0.93
4 14 0.0045 56 4.3 17.6 1 18 598 615 588 616 0.87
5 14 8.3e-06 0.1 13.1 12.8 1 18 654 671 644 672 0.85
6 14 1 1.2e+04 -3.2 0.7 5 10 701 706 701 706 0.94
7 14 2.8e-06 0.035 14.6 12.6 4 18 719 733 712 734 0.86
8 14 2 2.5e+04 -4.6 1.6 5 10 763 768 763 768 0.90
9 14 0.0097 1.2e+02 3.3 10.1 1 11 774 784 774 796 0.88
10 14 8.2e-10 1e-05 25.9 12.6 1 19 801 819 801 819 0.98
11 14 0.33 4.1e+03 -1.6 0.5 5 10 847 852 846 853 0.93
12 14 2 2.5e+04 -6.2 7.8 10 19 866 876 858 876 0.74
13 14 8.7e-07 0.011 16.2 12.4 1 16 912 927 912 938 0.87
14 14 4.2e-06 0.052 14.0 12.8 1 19 944 963 944 963 0.97

Sequence Information

Coding Sequence
ATGGCTACATGGGACGGTTCCTATCACAGCGCGGAAGATCCCAGGTTCTTTGTCTACTCCAATGGCAATGTTCTTGGCACTGATAACCGAGACTGGACAGTTTTCCCTGGCAATCGGGAGAACAACTTTTCACAGGGGAGTCAGAACCATTACCAGCAAGCTGAACCTCGGAGATTAGAACAAAGTAGTTCTACATTTTATGACATTGATCCGCATCCGTACTCCCGTCATAACGTTCCCACGGACCTATTAATGGATCATGCCTATAGAGAGCCGTTAATGTCATCCACTGAATCAGGAGACCCTAATTCCATTAATGACAAGCAATACTTCCCAGATAGCTCTGGTGTATCTCAAAGTACATCGTATTTTCATAGAGCTGAGGAGTTTGTACCAAATAGCACCCATATGGTAACACAAGAAGAAATTGTTAAATCTGACAGTAGTCAATGCTTTACAGTAAATGATGCATCAACTTCTCAAGTCCCAAATTTTCCGATTGTTCCATTCTTTCCAAACAACAAAGACAAATATATAAGAAAACAACAGGATGATAGAAGAGCTGCAAATTATAGACAAAGAGACATTCAAAGCACTACCACGTTTCATAAAGGAAATGTTCAAAAAAACTCATATAGGCCTCTAAACACTAAAGCGTATGGAAGATTTCAAAATGATCGATATTCCAATGGTAAACCACGATCAAGTAACTCTCAAGGAGATGCTCCACAGGATAGAAAAAGACAAAGCAATGCACAATCAATTGTTTCTTCGTCGTCAGGTAATAGTAATAGAGCAGAGTTGTTTATGGAGTTGTCTCAGGACAATGAACAATCTGTAACAGAGAATATCGCAGGAGATAAAACAACTCATGGTCTGTGTACTGGCAATGGTGAGGTTGCTTTGGCCCTAAAGAATGGCACGCAATTAGTTGACGATAGATCAAAAAGATTTTATGATCGGGGTAATGATCGTGTACAATATAAGGAAAATGTAACGAGCGGACAGTATCAACTCTCTTCTAGAAACCCAAGAAAACTAATTGGCAATGATAGAAATGACAAATTTGAGATGGACTCAAGGGAGAGAAGGTCGATCAGTCGTCAGGACTATGGAAGTTCCACACTCAACTATAATAAACAGAGCAAAGGTGAAAAAGCAAAGGATAAGGAAAGGAACAGGGATATGATtcaagaaagaaaggagaaagaacCAGGAAGTTGGAGGCAAAAGACAGGAAGTGGTGCCAGTGGAAAAACCGAGATGCAGAAACGAGGGCAATATAGAAAGCATGAAAATGATGACGATGCCAGTCAAAGGGAACGATTAACGGAGCAGTTAAATAAAGGGCAGTTAGAGTGTTTAGTATGTTGTGAGTTTATTAAGCAGGTTGACTACATTTGGTCTTGCACAAATTGTCACCATGTACTTCATTTGAAATGTCTGAAAAAGTGGGCAAAATCGTCGCAAGGGGAAAAGGGGTGGAGATGTCCCGCATGCCAAAATGTCAGCTCAGCCATTCCGGAGCACTACTTTTGTTTCTGTGGAAAAACGAAATCACCCGAATGGAATCGTAGGGATGTTGCTCATTCGTGTGGCGAAATTTGCGGTCGGTCTAGGTCTAGAAATAATTGTGTACATAAGTGCACGTTGCTTTGCCATCCCGGATCTTGTCCGTCGTGTACTGCCACAGTAACGAAACATTGCGGCTGTGGTAAAACTTCGCAGACAGTTCAATGCAGTACGTTAACAATGTTGCACTGCGACTCAGTGTGCGGTAAGGAATTGGGCTGTGAGAAGCACACCTGTGAAAAAAAGTGCCACCACGATGAATGTGGATCGTGCGAGAGAATGGTAAAACAAGTTTGTTACTGTGGTAAGAACAATCGAGAGGTAAGTTGTCAGGTTAATTTATCGTTTGCGTACTCTTGCGGTCATATTTGCGGTAAGACTTTGGACTGCGAGAAACACGATTGTACGGAAATTTGTCATCTGGGAAGTTGTGAGCCATGCTTGTTAACACCCGACAAAGTGTCCACCTGTTGCTGTGGACAATCTACCTTGACAGAGAAGAGGGATAGCTGTTTAGATCCAATATCTACGTGCGACAAGATATGTTCAAAACGACTTAAGTGTGGCCAACCAGATAATCCTCACACGTGTCAAGTGTCTTGTCACGTGGGAAATTGTCCCGAGTGCGAGTTAACGACAGATGTTAAATGTCGCTGCGGTAATATGGACAGAGAGATTGCTTGTAAAGAGTTGACGACGAAGGCAGACGATGCCCGGTGTGAAAAGAGATGCACGAAAAAGCGATCGTGCGGCAAACACAAATGCAATCAATTCTGCTGCATTGATATTGAGCATATTTGTCCTTTACCTTGTTCGAAGACGTTGACCTGTGGTCGGCACAAATGCGAACAGGCCTGTCACAAAGGTAGGTGTCAACAGTGCTGGCGCAGTAGTTTCGACGAGCTCTATTGTGAATGCGGTACAGCCGTGATATATCCACCCGTGCCTTGCGGTACGCGGAGACCAACGTGCAACAGGCCTTGTTCCAGGGAACATCCCTGCGGTCACGATGTACTACACAACTGCCACAGTGAGACTGTCTGTCCACCGTGCACAGTTTTAACTCAAAAATGGTGCTACGGTAAACACGAATTACGAAAAGCCGTTCCATGTTATGTGAATGAGATATCGTGTGGTATGCCATGTAACAAGCCGTTGTCTTGCGGCAGACATAAATGTATTACACTTTGTCACACTGGGCAGTGTGAAAAACCTGGACAACGTTGTATGCAGCCATGCACTGTTTCAAGAGACGTATGTGGACATATTTGTGCCGCACCTTGTCACGAAGGCAAATGTCCTGATAATCCATGTAGAGAAACGGTTAAGGTAACCTGTCAATGCGGGCATAGAAGCATGACGCGTGCATGCGCCGAAAATGCGCGCGAATATCAAAGAATAGCAAGCAACATACTGGCTAGTAAAATGGCAGACATGCAGCTTGGTCATTCTGTCGATTTGGAGGAAGTGTTTGGACAAGGTGCAAAGAGGCAAAACCAATTGAAAACTTTGGAATGCAACGATGAGTGTAAATTGATCGAGAGAAACAGAAGATTGGCATTGGGTTTGCAAATAGTAAATCCGGACTTAAGTGGTAAATTAATGCCAAGATATAGTGACTTCATGAAGCAGTGGGCGAAGAAGGATTCACATTTCTGTCAGCTAGTTCACGAAAAATTATCCGAATTGGTTCAACTGGCAAAAACGTCAAAGCAGAAGTCACGAAGTTACTCCTTCGAAAGTATGAATCGGGACAAGCGTCACTTTGTGCACGAGTCCTGTCAACACTTTGGTTGCGAGAGCCAGGCATATGATCAAGAACCAAAAAGAAATGTCGTCGCTACCGCGGTAAAGGATAAGTGTTGGTTGCCGAGTTACAGTCTCTTGGAGATTGTGCAGAGAGAAAATGGCCGGAGAAAAGTTCCTGGTCCAATGCTAAACACATCCAAGGGTAACAGTTCCGTGAAGACGGTTCTATCTCTACCGGTGAAAATGAATCAAAAGTTCATCTACGCACCGACATCCTCAAAGTCTCCCGAACCGGAGATTGACTACTTTGACTATCACAATTAA
Protein Sequence
MATWDGSYHSAEDPRFFVYSNGNVLGTDNRDWTVFPGNRENNFSQGSQNHYQQAEPRRLEQSSSTFYDIDPHPYSRHNVPTDLLMDHAYREPLMSSTESGDPNSINDKQYFPDSSGVSQSTSYFHRAEEFVPNSTHMVTQEEIVKSDSSQCFTVNDASTSQVPNFPIVPFFPNNKDKYIRKQQDDRRAANYRQRDIQSTTTFHKGNVQKNSYRPLNTKAYGRFQNDRYSNGKPRSSNSQGDAPQDRKRQSNAQSIVSSSSGNSNRAELFMELSQDNEQSVTENIAGDKTTHGLCTGNGEVALALKNGTQLVDDRSKRFYDRGNDRVQYKENVTSGQYQLSSRNPRKLIGNDRNDKFEMDSRERRSISRQDYGSSTLNYNKQSKGEKAKDKERNRDMIQERKEKEPGSWRQKTGSGASGKTEMQKRGQYRKHENDDDASQRERLTEQLNKGQLECLVCCEFIKQVDYIWSCTNCHHVLHLKCLKKWAKSSQGEKGWRCPACQNVSSAIPEHYFCFCGKTKSPEWNRRDVAHSCGEICGRSRSRNNCVHKCTLLCHPGSCPSCTATVTKHCGCGKTSQTVQCSTLTMLHCDSVCGKELGCEKHTCEKKCHHDECGSCERMVKQVCYCGKNNREVSCQVNLSFAYSCGHICGKTLDCEKHDCTEICHLGSCEPCLLTPDKVSTCCCGQSTLTEKRDSCLDPISTCDKICSKRLKCGQPDNPHTCQVSCHVGNCPECELTTDVKCRCGNMDREIACKELTTKADDARCEKRCTKKRSCGKHKCNQFCCIDIEHICPLPCSKTLTCGRHKCEQACHKGRCQQCWRSSFDELYCECGTAVIYPPVPCGTRRPTCNRPCSREHPCGHDVLHNCHSETVCPPCTVLTQKWCYGKHELRKAVPCYVNEISCGMPCNKPLSCGRHKCITLCHTGQCEKPGQRCMQPCTVSRDVCGHICAAPCHEGKCPDNPCRETVKVTCQCGHRSMTRACAENAREYQRIASNILASKMADMQLGHSVDLEEVFGQGAKRQNQLKTLECNDECKLIERNRRLALGLQIVNPDLSGKLMPRYSDFMKQWAKKDSHFCQLVHEKLSELVQLAKTSKQKSRSYSFESMNRDKRHFVHESCQHFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLLEIVQRENGRRKVPGPMLNTSKGNSSVKTVLSLPVKMNQKFIYAPTSSKSPEPEIDYFDYHN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-