Basic Information

Insect: Priocnemis perturbator
Gene Symbol: RpS26
Assembly: GCA_963942575.1
Location: OZ012653.1:4647998-4652980[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.022 2.2 9.3 0.0 2 23 346 368 346 368 0.93

2 15 0.00022 0.022 15.7 0.3 2 23 373 395 372 395 0.91

3 15 0.43 43 5.3 3.5 3 23 552 572 551 572 0.98

4 15 0.26 26 6.0 2.4 3 23 579 600 577 600 0.93

5 15 0.026 2.5 9.2 0.0 1 20 610 629 610 630 0.94

6 15 0.00013 0.013 16.3 1.0 2 23 641 662 641 662 0.96

7 15 0.036 3.6 8.7 5.5 1 23 675 697 675 697 0.98

8 15 0.00017 0.017 16.0 0.6 1 23 705 728 705 728 0.97

9 15 0.41 41 5.4 1.2 1 20 734 753 734 756 0.92

10 15 1e-05 0.001 19.9 1.5 2 23 760 782 760 782 0.97

11 15 0.51 51 5.1 3.9 1 23 802 824 802 824 0.95

12 15 3.1e-05 0.0031 18.3 1.5 1 23 830 852 830 852 0.97

13 15 2e-07 1.9e-05 25.3 4.3 1 23 857 879 857 879 0.98

14 15 0.021 2 9.5 8.7 1 23 887 909 887 909 0.98

15 15 5e-05 0.005 17.7 2.4 1 23 915 937 915 937 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.022	2.2	9.3	0.0	2	23	346	368	346	368	0.93
2	15	0.00022	0.022	15.7	0.3	2	23	373	395	372	395	0.91
3	15	0.43	43	5.3	3.5	3	23	552	572	551	572	0.98
4	15	0.26	26	6.0	2.4	3	23	579	600	577	600	0.93
5	15	0.026	2.5	9.2	0.0	1	20	610	629	610	630	0.94
6	15	0.00013	0.013	16.3	1.0	2	23	641	662	641	662	0.96
7	15	0.036	3.6	8.7	5.5	1	23	675	697	675	697	0.98
8	15	0.00017	0.017	16.0	0.6	1	23	705	728	705	728	0.97
9	15	0.41	41	5.4	1.2	1	20	734	753	734	756	0.92
10	15	1e-05	0.001	19.9	1.5	2	23	760	782	760	782	0.97
11	15	0.51	51	5.1	3.9	1	23	802	824	802	824	0.95
12	15	3.1e-05	0.0031	18.3	1.5	1	23	830	852	830	852	0.97
13	15	2e-07	1.9e-05	25.3	4.3	1	23	857	879	857	879	0.98
14	15	0.021	2	9.5	8.7	1	23	887	909	887	909	0.98
15	15	5e-05	0.005	17.7	2.4	1	23	915	937	915	937	0.98

Sequence Information

Coding Sequence: ATGAAGTCGGAATGTTGCGTGTTGGGATGCTCATCAAGTAGATGCGTAGTACCAGTGCACAATTTCCCTAAAGATCCAAAAGTATTTGCTCCGTGGAAGGCTGCGGTCCACTCAGAGAAAACAGAAGGTCTAAGTGACGATAAATTACGTACAAGGGTTGTCTGTTATCGACACTTTAAAGATGATGATTACATCATGGGATGCAAATACCGTAGACTTAGAGCAGGTGTTATACCTTCCATTGCATTACCTGCGTGTACCAATGAAGTGAATAATGCTGTATACCTAGCTGCAGTGAAAACTGAGGTATTGAAAAGTGTTGATTCATCTGACTCTTATAACGTTGAAGATGAAAAAATTGTTACCCATCATGTGGATCACAAATATTTTATGGAGAAAGATTATAGATCCTTGCTGCCCCGTCAAAGACTGAAGTCTGAGGATGTTTCAAGGCAAAATATAGAGACCCATGTAAACATGCCTGTACATAGTTCTATGAAGAACAGTTCACAGTTGTTTATAAACATACTTCCTGAGCATGAGACAATTGTTAGTAATGTTTCTAGAAATGAAACAAATTTAGCAGTTATAGCAAATGCCAATGGCCATAATACGCAGAATGAAAACATAGATATGCTGTGTGAAACAATTGAGGAAACTACAGTGGAGCCAGCAGAGGAGATCTGCCGCTTATGCGCCAAGAAGTCTACAAACCATGTTCTAATTTTCGGAGATAATGATTTGTATATTCTTGAGAAGATAAGCAGGTGCTTGCCAATAATTGTACTGTCCGATGATGGACTGCCACCCTATATTTGTAAGAGGTGCCTGGGCTACTTAAATATTAGTTACAAGTTGATTGTTACTTCTGTACAAGCAGATGCTTCTCTGAGAAACCAATTTGAAAAAGCAAGTACATCTGAGGAAGATTTGAATATACTAAATACGCACGAGATGCAAAGCAAGCCATCAAgaaaaaatagtcatcatcTATCCTTTAGAGAACTGAAAAGGAAAGCAATCGCTGGGCCGGCAGAGTGTGAATTCTGTGATATAGTCTTTGAAGATATAAGTGCCTTTGACAATCACATGGAAGCTGTTCATATGCTTCAGTGGAGATGTAACATTTGTGACAACAGCTTTGATACATCCTCAGACCTAATTTCCCATAAAACACTAGAACACAATGTAAATATTGACATTTGCAAAGCCTGTGTTTCTTTGAAAGAGAAATGTAAACACGAGAATGAGTCTGCtattaaaatagaaaataaatgtcACATCCATGAGAGCACAACTTGTAATACTCAAATCAAAGCACAACTTAAGAGTGCCAATTTAAAACAACAAATGCCAACTGCTATAAACAATGCTATACCTTGCTCAGGTACTGTAAATTCAGATACTATAATCTTCGTGGAGACAAAGAAAATGCTGCTAGAACCAAATCTCTACGAGGATACTGTACCTTGCTCAGATATCGTGAGCTCAAATGCTAAAATCTTAGTGGACACAAAGAAAACGCTCCTAGAACCAAATCTCTGCGAGGATACTGTACCTTGCTCAAATATTGTAAGTTCAAATACCTTAGTCGAGACAAAGAAAACGCTGCCAAAACCACATGTTTACAAGAAAAGGCCAAAAAAAATATTGTGTGAAGTTTGTAAAATTTGTTTCCACACTGATCGTCAATATGCCGCTCACAGGAAACTTCACGATTCCAAGCGCGTCATGTGCGTCTCCTGTCGCACAAAATGTTCCTCGATCTACAATCTGTTTCGACATAAAAGAGATGCGCACAACATGTATAAGAAAGTGCATCTGAGGTATGTATGTGACAAGTGCGGCAGGTTGTTTGCGACCGACACGCAGTGGGAGGCACACAGGGGCAACGCATGTCCAAAAAACCTTTTCAGCAATACTTGTAAATATTGCAAAATTGTTTTCCCAACGAACAAGAAGCTAAAGTGGCACCTCAATGACCATATGGCTGAGATGTTGAGCGATCCAACCATTTCGACACACAAATGTGTTACCTGTTCAAAAGTTTTTCTGCACAAAGAGTACTACCAGATGCACATGAAGGTCCACGATCCAGATTATCAGAGAAGTTATAAGTGCAGTATATGCAGTCAGCCGTTTGAAACTAGGGTTCGATTGCGAAACCATCAATTATCGGTTCACGAAGACGTAAGGATACATCCTTGCGATATGTGCATGAGAACTTTTCAACGATTGAGCACCATGAAAATACATCGTTGGAGCCACTTCAGACGAAAGTGCACTCATTGTGGTATAATGTTCGCAAGCTTGCGTGATCTAAGGAAGCATATAcgaaatgtacacggtttggagCCAGATATAAAACGTCGACATCCAAGCAATATTTACACTAGCGAGAAGCATGTGTGTAGATATTGCGGAAAATTATTATCCTCATTCAAAACTCTGATGTATCACGAGCACATTCATACGGGAGAGAGACCTTACGACTGCAAAATATGTCACAAGACATTTCCGAGCTCCAGTGGCCGTTGGGCTCACATGCAATACCATGAGAACAGAACCTTTATTTGCGAGTATTGCGGGAAATGTTTCAGATACAAAGCTTATTTGACGAAGCATATTAAGACGCATTTACCCATGACAGCTCGCAAGCATCAATGCGACATGTGTGATAAAACATTTTTGCGAAAGTGTCATTTAAATATGCACAAGAAAGTGCATGACGACACCCGGCCTTATACCTGTGACATCTGCCAATTCAGTTTTAAGCTGAAACAAGACTTGAAGAGGCACGCAAAACGTCATACGAATGGAACTGCAGCTGTGAGAGATATCTCAGACGCAAGTTACTACGGCTCTTATCAGCTACCCAAACTATACGCCAAGCTTCACTACTGCGTGTCTTGTGCCATTCACTCCAAGGTGGTGAGAAACAGATCGAAGGCTGATCGTCGTATTAGGACACCGCCAGTTCGTAATTTCCCAAGGGATCTTCGCCAAGGGCAACAGAACAGAAAATAA
Protein Sequence: MKSECCVLGCSSSRCVVPVHNFPKDPKVFAPWKAAVHSEKTEGLSDDKLRTRVVCYRHFKDDDYIMGCKYRRLRAGVIPSIALPACTNEVNNAVYLAAVKTEVLKSVDSSDSYNVEDEKIVTHHVDHKYFMEKDYRSLLPRQRLKSEDVSRQNIETHVNMPVHSSMKNSSQLFINILPEHETIVSNVSRNETNLAVIANANGHNTQNENIDMLCETIEETTVEPAEEICRLCAKKSTNHVLIFGDNDLYILEKISRCLPIIVLSDDGLPPYICKRCLGYLNISYKLIVTSVQADASLRNQFEKASTSEEDLNILNTHEMQSKPSRKNSHHLSFRELKRKAIAGPAECEFCDIVFEDISAFDNHMEAVHMLQWRCNICDNSFDTSSDLISHKTLEHNVNIDICKACVSLKEKCKHENESAIKIENKCHIHESTTCNTQIKAQLKSANLKQQMPTAINNAIPCSGTVNSDTIIFVETKKMLLEPNLYEDTVPCSDIVSSNAKILVDTKKTLLEPNLCEDTVPCSNIVSSNTLVETKKTLPKPHVYKKRPKKILCEVCKICFHTDRQYAAHRKLHDSKRVMCVSCRTKCSSIYNLFRHKRDAHNMYKKVHLRYVCDKCGRLFATDTQWEAHRGNACPKNLFSNTCKYCKIVFPTNKKLKWHLNDHMAEMLSDPTISTHKCVTCSKVFLHKEYYQMHMKVHDPDYQRSYKCSICSQPFETRVRLRNHQLSVHEDVRIHPCDMCMRTFQRLSTMKIHRWSHFRRKCTHCGIMFASLRDLRKHIRNVHGLEPDIKRRHPSNIYTSEKHVCRYCGKLLSSFKTLMYHEHIHTGERPYDCKICHKTFPSSSGRWAHMQYHENRTFICEYCGKCFRYKAYLTKHIKTHLPMTARKHQCDMCDKTFLRKCHLNMHKKVHDDTRPYTCDICQFSFKLKQDLKRHAKRHTNGTAAVRDISDASYYGSYQLPKLYAKLHYCVSCAIHSKVVRNRSKADRRIRTPPVRNFPRDLRQGQQNRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -