Pper017712.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Priocnemis perturbator
Gene Symbol
mecom-a
Assembly
GCA_963942575.1
Location
OZ012653.1:9249238-9263034[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 0.31 30 5.8 0.1 2 23 154 176 153 176 0.93
2 9 0.02 2 9.5 0.1 1 23 183 206 183 206 0.94
3 9 5.6e-05 0.0056 17.5 0.2 1 23 212 239 212 240 0.92
4 9 4.7e-06 0.00046 20.9 2.6 1 23 246 268 246 268 0.95
5 9 2.4e-05 0.0023 18.7 6.0 1 23 274 296 274 296 0.99
6 9 0.015 1.5 9.9 1.4 2 21 304 323 303 324 0.95
7 9 6.7e-09 6.7e-07 29.9 1.2 1 23 679 701 679 701 0.99
8 9 3.5e-07 3.5e-05 24.5 1.7 1 23 707 730 707 730 0.97
9 9 0.00017 0.017 16.0 4.8 1 23 736 758 736 758 0.99

Sequence Information

Coding Sequence
ATGGCGTTCCTCAACGAATATTCATGTTTTGTAGTAATCTGTATTGTTGTGGCTGTATGGTTACGTATGATCGAATTATTTGTACCTCAGTGTTCTGTACCCTTGAGCGATTTAAACGGTTCCTTTTTCGATTGCGTGCAGATCCACATTGCTGGGAACGGAGCCAGAGGGTGGTTGGACGCATCTCACGAAGCAAACAATTGGCTCAAGTATATTCGGACCACGGCCAGGCCACACGTGGTGAACATGCGACACGTACTCATTGGTGGACAGATGATGTACGAGGCTGTGCGGGACATTGCCGTTGGTGAAGAACTTGTTTTAGGACTTCGAGAACCTCTTCAGCTTCAGGATATGCTAGGCGAGAACACTACCGAGGATAGAAGCGACCGTGAAACTGCGTCGCAGCACAGTGGAACCGTCGACGAAGAcagggaggaggaagaggagacagaGACAAGATGCCGCGTCTGCGATCAACCGTTCCAAGATATTGATTTATTGGACGGACACTTGGTGACATCTCACCGATATCCCGCGGATCAACATCGTTGCGAGGATTGCCCACGCGCTTACGCTTGGCGAGAATTATTGGTTCGCCATCGTGCGATCGTCCACGGCCATCGTCGGCATTACAACTGTGAAAATTGTCCGAAGTGGAACATCCCGCAGGTCTTCACGGATCCATCCAACCTCCAGCGACACATCCGGGCGCATCACGTGGGCGCGAGGAGTCACGCGTGCACAGAGTGCGGCAAGACATTCGCGACCAGTTCTGGCCTGAAGCAGCACACCCACATCCACAGCAGCGTCAAGCCCTTTCAGTGCGAAGTTTGCTTCAAGTCGTACACCCAGTTCTCCAATTTATGCCGTCACAAGCGAATGCACGCCGACTGTCGCATGCAGATAAAGTGTGTTAAATGCGGTCATACCTACAACACAGTGACGTCACTGTCTAAGCACAAGAGATTCTGCGACTCTACGACGCCGACCGGACCACCAGCCGCCATGCCGCAGTTGCCTACCTCCGGACCCAGTCCGTTCTTGGTCTACCGACCGCCCGTTAGCTTGCCGGGTGGCTTACCGTTCTATCCACCCGGCCTCATGAGCCACTATCCCAACATCTTCCAAAACGCTCCGAACTTCCTAAACGCACCGCTTCTCTTCCCGCCGAAAGTCGAGGAATCAGAGAAGAGAAGTGAAAGCCCGCTGAAGAAGGAGCGCTTCACGCCACCTCGAGTACCCCCGCAGCAAAGCAAGGTGTCGCCATCAACTGCTGAGGAGGCAACGTCGACGTTCAGGCCCTCGCCAGCCAGACCACCCGTCCAGCCGAGACAGAGCGACGAGGATCCGGGTAAATGTCGAGAGTTCCAGAAGGGAGGAGGCCATAGAAAGATGGAGACCGACGGCACGAGTCCATCCGAAGAGACGGGCGATCAGCCTTTGGACCTGAGGGTTCAGACCAGGAAGCACGATAAGGTCCCGAGCATCTCGGAAAGCAGTCGCAGTCCCTCTCCGACGGTAGCATCTCTGGAAGATGCTCATCCTCTAGCAGCGGACCCACCGAAAGTCGACGAGGAGCCTTTAGCAGCGATGGAACTCGAGTCCAAGGACGTGCCGAGCAGTCCGCAGTTGAGAACGAGCCTGCCGGCAGAACAACCGCTGACGAACACGTCACCGCACATGGCTTATCCCAGACCGATTCATCCGATGTTCCTCGAGGCGATGTATCGGAGTCCGGCCGGAAGTTTCTCGGGTTTTCCGGGCGCACCTCCACCTCCAGGCGGAGCCACGCCGGAATCCAGACTTTTACCAGGCCTCCCaccctttggacctcctcgtgGGCTGCCTTTTTTAGGAACGCTTATGAACGGACTCAGCGGCGCCAGGCCAGGCGGAGGGTTCGATCTACTTGCCAGACCGCCACTGGGTGCGTTCCCCGGCGTGAAAACCTTTCAAGACGCTGTCATGTCAccgcatcatcatcaccatcatcatcatcatcatcacgccAACGGCAAGATCAAGGACCGCTACTCGTGCAAGTTCTGCGGCAAGGTCTTTCCTCGATCGGCCAATCTGACCAGGCACCTTAGAACGCACACCGGCGAACAGCCGTACAAGTGTAAGTACTGCGAGAGATCGTTCAGCATCTCCAGCAATCTGCAGAGACACGTGAGGAATATCCATGATAAGCAGCGACCGTTCAAGTGCCGGCTGTGCGAGAGATGCTTCGGACAACAGACCAATCTCGACAGGCATCTGAAGAAGCACGAGGCGGATGATGGCAGTGGAGTCGTGTCGGTGGCTGACTCTCCCGGCAGCAGTAACGAGAATGAGCGCGAGGACACGTATTTCGACGAGATCAGGTCGTTCATGGGGAAGGTCACTTACGGCGGTGAGGCTGGCTACGGGCTGCCTCATCATCCGGCCTACCTCCCAGCCCGTTTGCACGATATGCACGAGTCGTCAAAGATGGAAACGGAGTATGACGAGGACGAAGACAGCGAGGAAGGAGTCTCCCCCATTGAGGAAAGGGACGGCTTATCTCCGATCGAAGCCAAGGAGTCGCCGCCACCCTCACAGTGCCACTTGAAGCTGCGAGATAAGCAAGAGCTGCTCAACAATAACACGGCCGAACCGGTAATCGAGATCTCGACATAG
Protein Sequence
MAFLNEYSCFVVICIVVAVWLRMIELFVPQCSVPLSDLNGSFFDCVQIHIAGNGARGWLDASHEANNWLKYIRTTARPHVVNMRHVLIGGQMMYEAVRDIAVGEELVLGLREPLQLQDMLGENTTEDRSDRETASQHSGTVDEDREEEEETETRCRVCDQPFQDIDLLDGHLVTSHRYPADQHRCEDCPRAYAWRELLVRHRAIVHGHRRHYNCENCPKWNIPQVFTDPSNLQRHIRAHHVGARSHACTECGKTFATSSGLKQHTHIHSSVKPFQCEVCFKSYTQFSNLCRHKRMHADCRMQIKCVKCGHTYNTVTSLSKHKRFCDSTTPTGPPAAMPQLPTSGPSPFLVYRPPVSLPGGLPFYPPGLMSHYPNIFQNAPNFLNAPLLFPPKVEESEKRSESPLKKERFTPPRVPPQQSKVSPSTAEEATSTFRPSPARPPVQPRQSDEDPGKCREFQKGGGHRKMETDGTSPSEETGDQPLDLRVQTRKHDKVPSISESSRSPSPTVASLEDAHPLAADPPKVDEEPLAAMELESKDVPSSPQLRTSLPAEQPLTNTSPHMAYPRPIHPMFLEAMYRSPAGSFSGFPGAPPPPGGATPESRLLPGLPPFGPPRGLPFLGTLMNGLSGARPGGGFDLLARPPLGAFPGVKTFQDAVMSPHHHHHHHHHHHANGKIKDRYSCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHDKQRPFKCRLCERCFGQQTNLDRHLKKHEADDGSGVVSVADSPGSSNENEREDTYFDEIRSFMGKVTYGGEAGYGLPHHPAYLPARLHDMHESSKMETEYDEDEDSEEGVSPIEERDGLSPIEAKESPPPSQCHLKLRDKQELLNNNTAEPVIEIST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01407591;
90% Identity
iTF_00393766;
80% Identity
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